Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0006645g0060 Nicotiana tabacum HOM05D006199 ORTHO05D006558 9.5e-248 859.8 445 100.0
Nitab4.5_0005853g0010 Nicotiana tabacum HOM05D006199 ORTHO05D006558 1.4e-214 749.6 450 88.0
Sopen01g053590 Solanum pennellii HOM05D006199 ORTHO05D006558 6.9e-198 694.1 446 82.1
Solyc01g111550.3 Solanum lycopersicum HOM05D006199 ORTHO05D006558 7.7e-197 690.6 446 81.6
CAN.G588.74 Capsicum annuum HOM05D006199 ORTHO05D006558 3.3e-192 675.2 446 80.3
Peaxi162Scf00362g00651 Petunia axillaris HOM05D006199 ORTHO05D006558 4.1e-190 668.3 446 80.3
PGSC0003DMG400006190 Solanum tuberosum HOM05D006199 ORTHO05D006558 2.9e-172 609.0 445 73.7
Cfa005236 Carpinus fangiana HOM05D006199 ORTHO05D006558 1.4e-137 493.8 452 62.2
Lj5A179T83 Lonicera japonica HOM05D006199 ORTHO05D006558 3.4e-136 489.2 440 60.5
CiPaw.05G081500 Carya illinoinensis HOM05D006199 ORTHO05D006558 5.8e-136 488.4 442 62.0
Dinv41943 Davidia involucrata HOM05D006199 ORTHO05D006558 1.2e-133 480.7 365 68.5
Cc02_g16220 Coffea canephora HOM05D006199 ORTHO05D006558 3.5e-133 479.2 372 69.4
MSTRG.19995 Avicennia marina HOM05D006199 ORTHO05D006558 2.5e-131 473.0 446 59.0
Rhsim11G0191800 Rhododendron simsii HOM05D006199 ORTHO05D006558 5.6e-131 471.9 444 60.1
QL11p050170 Quercus lobata HOM05D006199 ORTHO05D006558 1.2e-130 470.7 450 59.3
CANSAT25G2535 Cannabis sativa HOM05D006199 ORTHO05D006558 1.4e-129 467.2 442 58.4
TAR628G1195 Trochodendron aralioides HOM05D006199 ORTHO05D006558 1.2e-128 464.2 441 58.7
Potri.009G134500 Populus trichocarpa HOM05D006199 ORTHO05D006558 2.0e-128 463.4 443 57.8
Sabra09G0104300 Salix brachista HOM05D006199 ORTHO05D006558 5.8e-128 461.8 447 57.0
TWI75G1548 Tripterygium wilfordii HOM05D006199 ORTHO05D006558 1.3e-127 460.7 441 59.0
GSVIVG01024030001 Vitis vinifera HOM05D006199 ORTHO05D006558 2.2e-127 459.9 362 67.1
FvH4_2g01260 Fragaria vesca HOM05D006199 ORTHO05D006558 6.6e-124 448.4 442 57.5
RcHm_v2.0_Chr6g0251921 Rosa chinensis HOM05D006199 ORTHO05D006558 2.5e-123 446.4 442 57.5
PGR142G1980 Punica granatum HOM05D006199 ORTHO05D006558 7.3e-123 444.9 453 53.6
FAN20G1063 Fragaria x ananassa HOM05D006199 ORTHO05D006558 1.4e-121 440.7 442 56.8
Sed0003263 Sechium edule HOM05D006199 ORTHO05D006558 1.8e-121 440.3 441 55.1
ClCG02G011890 Citrullus lanatus HOM05D006199 ORTHO05D006558 2.4e-121 439.9 445 56.0
SalBow1G2578 Salvia bowleyana HOM05D006199 ORTHO05D006558 4.0e-121 439.1 447 54.6
Phvul.009G119500 Phaseolus vulgaris HOM05D006199 ORTHO05D006558 5.2e-121 438.7 441 57.6
Eucgr.I01413 Eucalyptus grandis HOM05D006199 ORTHO05D006558 6.8e-121 438.3 447 54.8
MD10G1095100 Malus domestica HOM05D006199 ORTHO05D006558 1.7e-119 433.7 443 56.0
Nn5g30772 Nelumbo nucifera HOM05D006199 ORTHO05D006558 2.9e-119 433.0 442 55.7
VMungo1309G0102 Vigna mungo HOM05D006199 ORTHO05D006558 3.2e-118 429.5 445 56.0
Actinidia00620 Actinidia chinensis HOM05D006199 ORTHO05D006558 5.4e-118 428.7 436 58.3
EL10Ac9g21386 Beta vulgaris HOM05D006199 ORTHO05D006558 7.1e-118 428.3 443 53.0
Haze_02147 Corylus avellana HOM05D006199 ORTHO05D006558 1.3e-116 424.1 506 52.0
CsaV3_2G016060 Cucumis sativus L. HOM05D006199 ORTHO05D006558 1.3e-116 424.1 438 54.8
Thecc.02G060900 Theobroma cacao HOM05D006199 ORTHO05D006558 1.3e-116 424.1 418 57.2
MBI08_g14630_MAGBIO Magnolia biondii HOM05D006199 ORTHO05D006558 2.8e-114 416.4 442 54.3
Ah.01g022950 Amaranthus hybridus HOM05D006199 ORTHO05D006558 3.6e-114 416.0 444 51.6
Migut.B00085 Erythranthe guttata HOM05D006199 ORTHO05D006558 4.8e-114 415.6 445 55.1
Gohir.A01G168100 Gossypium hirsutum HOM05D006199 ORTHO05D006558 8.1e-114 414.8 418 54.3
FAN24G2717 Fragaria x ananassa HOM05D006199 ORTHO05D006558 1.8e-113 413.7 413 55.9
Gorai.002G197400 Gossypium raimondii HOM05D006199 ORTHO05D006558 1.8e-113 413.7 418 53.6
Duzib132G0247 Durio zibethinus HOM05D006199 ORTHO05D006558 5.3e-113 412.1 423 55.1
FAN27G0272 Fragaria x ananassa HOM05D006199 ORTHO05D006558 1.2e-112 411.0 441 55.3
Aqoxy6G02177 Aquilegia oxysepala HOM05D006199 ORTHO05D006558 1.5e-112 410.6 443 53.5
Sc18g0006460 Simmondsia chinensis HOM05D006199 ORTHO05D006558 2.0e-112 410.2 396 55.8
Medtr3g117880 Medicago truncatula HOM05D006199 ORTHO05D006558 4.4e-112 409.1 449 55.5
AUR62013038 Chenopodium quinoa HOM05D006199 ORTHO05D006558 9.9e-112 407.9 441 51.7
Lsat_1_v5_gn_4_71580 Lactuca sativa HOM05D006199 ORTHO05D006558 3.8e-111 406.0 440 52.5
Glyma.04G003800 Glycine max HOM05D006199 ORTHO05D006558 1.4e-110 404.1 445 54.8
Lj1g0009253 Lotus japonicus HOM05D006199 ORTHO05D006558 1.9e-110 403.7 453 54.3
MELO3C020815.2 Cucumis melo HOM05D006199 ORTHO05D006558 2.7e-109 399.8 487 49.7
Prupe.8G164900 Prunus persica HOM05D006199 ORTHO05D006558 7.8e-109 398.3 439 52.2
Ciclev10028644m.g Citrus clementina HOM05D006199 ORTHO05D006558 3.9e-108 396.0 444 52.5
Manes.04G075600 Manihot esculenta HOM05D006199 ORTHO05D006558 1.9e-107 393.7 395 54.4
arahy.Tifrunner.gnm1.ann1.H9ZTXG Arachis hypogaea HOM05D006199 ORTHO05D006558 3.3e-107 392.9 447 54.6
ECA234G0878 Erigeron canadensis HOM05D006199 ORTHO05D006558 4.3e-107 392.5 441 51.5
AL4G10110 Arabidopsis lyrata HOM05D006199 ORTHO05D006558 1.4e-105 387.5 360 57.8
AT2G20980 Arabidopsis thaliana HOM05D006199 ORTHO05D006558 1.4e-105 387.5 439 50.1
Carub.0004s0005 Capsella rubella HOM05D006199 ORTHO05D006558 2.4e-105 386.7 381 55.1
Gohir.D01G159100 Gossypium hirsutum HOM05D006199 ORTHO05D006558 4.0e-105 386.0 342 57.9
Oeu050364.1 Olea europaea HOM05D006199 ORTHO05D006558 5.3e-105 385.6 283 70.7
Thhalv10000193m.g Eutrema salsugineum HOM05D006199 ORTHO05D006558 2.2e-103 380.2 442 50.9
TPR.G38477 Trifolium pratense HOM05D006199 ORTHO05D006558 1.6e-101 374.0 453 52.1
PSO675G4200 Papaver somniferum HOM05D006199 ORTHO05D006558 1.0e-100 371.3 460 48.9
HanXRQChr10g0300911 Helianthus annuus HOM05D006199 ORTHO05D006558 2.3e-100 370.2 441 49.2
PSO541G4917 Papaver somniferum HOM05D006199 ORTHO05D006558 5.1e-100 369.0 459 49.0
Sp4g00170 Schrenkiella parvula HOM05D006199 ORTHO05D006558 8.7e-100 368.2 444 48.6
Aa31LG7G15660 Aethionema arabicum HOM05D006199 ORTHO05D006558 9.6e-99 364.8 464 48.1
DCAR_022808 Daucus carota HOM05D006199 ORTHO05D006558 9.6e-99 364.8 439 51.5
SHI05731 Sapria himalayana HOM05D006199 ORTHO05D006558 1.3e-98 364.4 376 53.2
THA.LOC104807811 Tarenaya hassleriana HOM05D006199 ORTHO05D006558 2.8e-98 363.2 438 48.4
Ca_15302_v3 Cicer arietinum L. HOM05D006199 ORTHO05D006558 3.7e-98 362.8 397 53.7
CiPaw.06G122500 Carya illinoinensis HOM05D006199 ORTHO05D006558 4.8e-98 362.5 363 56.7
Atru.chr5.3311 Acer truncatum HOM05D006199 ORTHO05D006558 1.7e-95 354.0 396 50.8
ATR0078G008 Amborella trichopoda HOM05D006199 ORTHO05D006558 4.9e-95 352.4 447 47.9
A03p27410 Brassica napus HOM05D006199 ORTHO05D006558 2.1e-93 347.1 446 48.7
AUR62010046 Chenopodium quinoa HOM05D006199 ORTHO05D006558 4.6e-93 345.9 440 47.5
BraA03t11952Z Brassica rapa HOM05D006199 ORTHO05D006558 2.3e-92 343.6 446 48.4
C03p33040 Brassica napus HOM05D006199 ORTHO05D006558 3.0e-92 343.2 448 48.4
Hund00025 Selenicereus undatus HOM05D006199 ORTHO05D006558 3.0e-92 343.2 443 47.6
BcaC01g04861 Brassica carinata HOM05D006199 ORTHO05D006558 6.7e-92 342.0 448 48.4
BolC3t15631H Brassica oleracea HOM05D006199 ORTHO05D006558 6.7e-92 342.0 448 48.2
COL.COLO4_17328 Corchorus olitorius HOM05D006199 ORTHO05D006558 9.6e-91 338.2 407 49.6
CARHR111860 Cardamine hirsuta HOM05D006199 ORTHO05D006558 1.1e-89 334.7 409 48.2
HPP92_008341 Vanilla planifolia HOM05D006199 ORTHO05D006558 1.3e-87 327.8 443 47.6
Lalb_Chr23g0265011 Lupinus albus HOM05D006199 ORTHO05D006558 1.7e-87 327.4 371 51.5
arahy.Tifrunner.gnm1.ann1.WS10KT Arachis hypogaea HOM05D006199 ORTHO05D006558 1.9e-86 323.9 447 48.8
Os09g0539400 Oryza sativa ssp. japonica HOM05D006199 ORTHO05D006558 3.2e-86 323.2 451 45.0
BcaB07g29803 Brassica carinata HOM05D006199 ORTHO05D006558 4.2e-78 296.2 461 42.7
Cpa.g.sc37.143 Carica papaya HOM05D006199 ORTHO05D006558 1.0e-76 291.6 270 56.7
Zm00001eb331950 Zea mays HOM05D006199 ORTHO05D006558 5.1e-76 289.3 342 46.2
vmacro02274 Vaccinium macrocarpon HOM05D006199 ORTHO05D006558 4.3e-75 286.2 365 46.8
CSS0017687 Camellia sinensis var. sinensis HOM05D006199 ORTHO05D006558 2.4e-73 280.4 220 66.4
Psat5g002720 Pisum sativum HOM05D006199 ORTHO05D006558 2.6e-72 276.9 445 43.4
FAN11G3400 Fragaria x ananassa HOM05D006199 ORTHO05D006558 2.2e-66 257.3 249 56.6
unitig_37.g12834 Utricularia gibba HOM05D006199 ORTHO05D006558 2.2e-58 230.7 338 43.2
FvH4_3g06660 Fragaria vesca HOM05D006199 ORTHO05D006558 2.6e-56 223.8 196 59.2
Pp3c15_24300 Physcomitrium patens HOM05D006199 ORTHO05D006558 2.4e-49 200.7 432 35.0
Mapoly0068s0001 Marchantia polymorpha HOM05D006199 ORTHO05D006558 6.5e-47 192.6 356 36.5
AagrBONN_evm.TU.Sc2ySwM_362.2501 Anthoceros agrestis HOM05D006199 ORTHO05D006558 1.4e-44 184.9 417 31.4
FAN12G0591 Fragaria x ananassa HOM05D006199 ORTHO05D006558 6.6e-39 166.0 152 58.6
FvH4_1g02330 Fragaria vesca HOM05D006199 ORTHO05D006558 2.5e-38 164.1 140 62.1
Actinidia20510 Actinidia chinensis HOM05D006199 ORTHO05D006558 1.2e-37 161.8 131 64.9
FAN14G5753 Fragaria x ananassa HOM05D006199 ORTHO05D006558 2.1e-37 161.0 140 58.6
FAN06G5031 Fragaria x ananassa HOM05D006199 ORTHO05D006558 6.1e-37 159.5 129 62.0
AUR62027127 Chenopodium quinoa HOM05D006199 ORTHO05D006558 8.0e-37 159.1 195 50.3
CSS0031508 Camellia sinensis var. sinensis HOM05D006199 ORTHO05D006558 6.3e-34 149.4 178 53.4
FvH4_5g37420 Fragaria vesca HOM05D006199 ORTHO05D006558 2.7e-32 144.1 180 50.0
FvH4_4g14930 Fragaria vesca HOM05D006199 ORTHO05D006558 1.4e-28 131.7 129 54.3
SGA_v2.0_scaffold58G20372 Striga asiatica HOM05D006199 ORTHO05D006558 5.2e-28 129.8 166 50.0
BcaB01g02961 Brassica carinata HOM05D006199 ORTHO05D006558 4.9e-26 123.2 185 43.2
MCO03G518 Micromonas commoda HOM05D006199 ORTHO05D006558 3.5e-24 117.1 221 31.7
FAN24G0607 Fragaria x ananassa HOM05D006199 ORTHO05D006558 4.3e-22 110.2 77 64.9
FvH4_2g23470 Fragaria vesca HOM05D006199 ORTHO05D006558 4.0e-20 103.6 69 69.6
FAN14G4166 Fragaria x ananassa HOM05D006199 ORTHO05D006558 2.6e-19 100.9 61 75.4
FAN06G2201 Fragaria x ananassa HOM05D006199 ORTHO05D006558 2.2e-18 97.8 152 45.4
FvH4_7g17270 Fragaria vesca HOM05D006199 ORTHO05D006558 3.7e-18 97.1 81 58.0
RcHm_v2.0_Chr5g0048301 Rosa chinensis HOM05D006199 ORTHO05D006558 4.9e-18 96.7 248 29.4
Cre07.g351400 Chlamydomonas reinhardtii HOM05D006199 ORTHO05D006558 3.9e-15 87.0 315 25.4
CDE02G3657 Ceratophyllum demersum HOM05D006199 ORTHO05D006558 1.4e-12 78.6 102 49.0
CBR_g870 Chara braunii HOM05D006199 ORTHO05D006558 1.5e-11 75.1 324 26.9
HanXRQChr15g0479941 Helianthus annuus HOM05D006199 ORTHO05D006558 3.7e-10 70.5 79 48.1
FvH4_4g05800 Fragaria vesca HOM05D006199 ORTHO05D006558 3.5e-08 63.9 54 57.4
Duzib248G0391 Durio zibethinus HOM05D006199 ORTHO05D006558 5.6e-06 56.6 129 32.6


User provided reference genes

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