Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0006639g0060 Nicotiana tabacum HOM05D004609 ORTHO05D005537 1.6e-61 239.2 117 100.0
Nitab4.5_0000650g0230 Nicotiana tabacum HOM05D004609 ORTHO05D005537 1.5e-51 206.1 118 89.0
Nitab4.5_0004205g0030 Nicotiana tabacum HOM05D004609 ORTHO05D005537 6.3e-50 200.7 118 87.3
PGSC0003DMG400008104 Solanum tuberosum HOM05D004609 ORTHO05D005537 1.1e-49 199.9 118 86.4
Solyc11g069360.2 Solanum lycopersicum HOM05D004609 ORTHO05D005537 1.4e-49 199.5 118 85.6
Sopen11g028080 Solanum pennellii HOM05D004609 ORTHO05D005537 4.1e-49 198.0 117 86.3
CAN.G631.22 Capsicum annuum HOM05D004609 ORTHO05D005537 3.5e-48 194.9 118 84.7
Nitab4.5_0006639g0040 Nicotiana tabacum HOM05D004609 ORTHO05D005537 1.3e-47 193.0 118 83.1
Dinv32752 Davidia involucrata HOM05D004609 ORTHO05D005537 5.5e-46 187.6 116 81.0
Dinv32753 Davidia involucrata HOM05D004609 ORTHO05D005537 5.5e-46 187.6 116 81.0
Nitab4.5_0012973g0010 Nicotiana tabacum HOM05D004609 ORTHO05D005537 4.7e-45 184.5 118 76.3
Lj1A191G19 Lonicera japonica HOM05D004609 ORTHO05D005537 1.2e-43 179.9 114 78.9
Cc01_g11180 Coffea canephora HOM05D004609 ORTHO05D005537 2.0e-43 179.1 116 75.9
MD11G1134900 Malus domestica HOM05D004609 ORTHO05D005537 3.4e-43 178.3 116 76.7
Prupe.6G100900 Prunus persica HOM05D004609 ORTHO05D005537 3.4e-43 178.3 115 78.3
Oeu059598.1 Olea europaea HOM05D004609 ORTHO05D005537 4.4e-43 177.9 116 77.6
COL.COLO4_18340 Corchorus olitorius HOM05D004609 ORTHO05D005537 7.5e-43 177.2 114 78.9
QL01p022329 Quercus lobata HOM05D004609 ORTHO05D005537 1.7e-42 176.0 116 75.9
TWI79G0533 Tripterygium wilfordii HOM05D004609 ORTHO05D005537 1.7e-42 176.0 114 78.9
MD03G1117100 Malus domestica HOM05D004609 ORTHO05D005537 2.2e-42 175.6 116 75.9
Thecc.09G339900 Theobroma cacao HOM05D004609 ORTHO05D005537 2.2e-42 175.6 114 78.1
TAR623G1761 Trochodendron aralioides HOM05D004609 ORTHO05D005537 2.2e-42 175.6 114 78.9
Eucgr.B02494 Eucalyptus grandis HOM05D004609 ORTHO05D005537 2.8e-42 175.3 114 77.2
Gorai.013G266600 Gossypium raimondii HOM05D004609 ORTHO05D005537 3.7e-42 174.9 114 78.9
PGR102G0162 Punica granatum HOM05D004609 ORTHO05D005537 3.7e-42 174.9 113 76.1
Gohir.D13G235900 Gossypium hirsutum HOM05D004609 ORTHO05D005537 4.8e-42 174.5 114 78.9
Gohir.A13G230400 Gossypium hirsutum HOM05D004609 ORTHO05D005537 6.3e-42 174.1 113 79.6
QL03p063529 Quercus lobata HOM05D004609 ORTHO05D005537 8.3e-42 173.7 116 76.7
QL03p063925 Quercus lobata HOM05D004609 ORTHO05D005537 8.3e-42 173.7 116 76.7
Cfa011322 Carpinus fangiana HOM05D004609 ORTHO05D005537 1.1e-41 173.3 116 74.1
Oeu002864.1 Olea europaea HOM05D004609 ORTHO05D005537 1.1e-41 173.3 116 75.9
RcHm_v2.0_Chr5g0059481 Rosa chinensis HOM05D004609 ORTHO05D005537 1.1e-41 173.3 116 75.9
FvH4_3g32470 Fragaria vesca HOM05D004609 ORTHO05D005537 1.4e-41 172.9 115 76.5
FAN11G0836 Fragaria x ananassa HOM05D004609 ORTHO05D005537 1.8e-41 172.6 115 76.5
TAR633G2157 Trochodendron aralioides HOM05D004609 ORTHO05D005537 1.8e-41 172.6 116 75.0
Migut.D02219 Erythranthe guttata HOM05D004609 ORTHO05D005537 2.4e-41 172.2 115 72.2
MSTRG.17807 Avicennia marina HOM05D004609 ORTHO05D005537 3.1e-41 171.8 116 72.4
ECA248G0132 Erigeron canadensis HOM05D004609 ORTHO05D005537 3.1e-41 171.8 115 75.7
FAN21G1816 Fragaria x ananassa HOM05D004609 ORTHO05D005537 4.1e-41 171.4 115 75.7
Nitab4.5_0006639g0090 Nicotiana tabacum HOM05D004609 ORTHO05D005537 4.1e-41 171.4 118 78.0
Actinidia07134 Actinidia chinensis HOM05D004609 ORTHO05D005537 7.0e-41 170.6 114 77.2
HanXRQChr01g0016861 Helianthus annuus HOM05D004609 ORTHO05D005537 7.0e-41 170.6 115 74.8
FAN16G0772 Fragaria x ananassa HOM05D004609 ORTHO05D005537 9.1e-41 170.2 115 74.8
PSO063G6287 Papaver somniferum HOM05D004609 ORTHO05D005537 9.1e-41 170.2 114 77.2
DCAR_006058 Daucus carota HOM05D004609 ORTHO05D005537 2.0e-40 169.1 114 73.7
Duzib168G0882 Durio zibethinus HOM05D004609 ORTHO05D005537 2.0e-40 169.1 114 74.6
PSO339G4039 Papaver somniferum HOM05D004609 ORTHO05D005537 2.0e-40 169.1 114 76.3
Rhsim01G0217400 Rhododendron simsii HOM05D004609 ORTHO05D005537 2.7e-40 168.7 114 75.4
CSS0023307 Camellia sinensis var. sinensis HOM05D004609 ORTHO05D005537 3.5e-40 168.3 117 76.1
Lsat_1_v5_gn_1_65361 Lactuca sativa HOM05D004609 ORTHO05D005537 3.5e-40 168.3 115 71.3
Nn2g13092 Nelumbo nucifera HOM05D004609 ORTHO05D005537 3.5e-40 168.3 116 78.4
arahy.Tifrunner.gnm1.ann1.DB762C Arachis hypogaea HOM05D004609 ORTHO05D005537 4.5e-40 167.9 113 73.5
arahy.Tifrunner.gnm1.ann1.ZK6QPF Arachis hypogaea HOM05D004609 ORTHO05D005537 4.5e-40 167.9 113 73.5
Hma1.2p1_1031F.1_g250010 Hydrangea macrophylla HOM05D004609 ORTHO05D005537 4.5e-40 167.9 114 73.7
arahy.Tifrunner.gnm1.ann1.M55FGE Arachis hypogaea HOM05D004609 ORTHO05D005537 5.9e-40 167.5 113 73.5
CSS0022919 Camellia sinensis var. sinensis HOM05D004609 ORTHO05D005537 5.9e-40 167.5 117 76.1
FAN25G2211 Fragaria x ananassa HOM05D004609 ORTHO05D005537 5.9e-40 167.5 113 74.3
GSVIVG01025180001 Vitis vinifera HOM05D004609 ORTHO05D005537 5.9e-40 167.5 114 73.7
Nitab4.5_0005621g0180 Nicotiana tabacum HOM05D004609 ORTHO05D005537 7.7e-40 167.2 96 87.5
VMungo1127G1456 Vigna mungo HOM05D004609 ORTHO05D005537 7.7e-40 167.2 116 69.8
SalBow3G2420 Salvia bowleyana HOM05D004609 ORTHO05D005537 1.0e-39 166.8 114 71.9
arahy.Tifrunner.gnm1.ann1.GT28YG Arachis hypogaea HOM05D004609 ORTHO05D005537 2.3e-39 165.6 113 73.5
PSO017G0942 Papaver somniferum HOM05D004609 ORTHO05D005537 2.3e-39 165.6 114 74.6
Phvul.011G078800 Phaseolus vulgaris HOM05D004609 ORTHO05D005537 2.3e-39 165.6 113 70.8
Rhsim13G0094100 Rhododendron simsii HOM05D004609 ORTHO05D005537 2.3e-39 165.6 114 73.7
Lj3g0003868 Lotus japonicus HOM05D004609 ORTHO05D005537 2.9e-39 165.2 116 72.4
PSO478G0080 Papaver somniferum HOM05D004609 ORTHO05D005537 3.8e-39 164.9 114 74.6
CiPaw.13G112500 Carya illinoinensis HOM05D004609 ORTHO05D005537 5.0e-39 164.5 116 71.6
Glyma.11G147000 Glycine max HOM05D004609 ORTHO05D005537 5.0e-39 164.5 116 70.7
Lalb_Chr19g0137311 Lupinus albus HOM05D004609 ORTHO05D005537 5.0e-39 164.5 116 72.4
SalBow6G5279 Salvia bowleyana HOM05D004609 ORTHO05D005537 5.0e-39 164.5 114 71.9
ClCG03G002070 Citrullus lanatus HOM05D004609 ORTHO05D005537 8.6e-39 163.7 114 71.9
Ciclev10029204m.g Citrus clementina HOM05D004609 ORTHO05D005537 8.6e-39 163.7 114 71.9
Manes.11G144600 Manihot esculenta HOM05D004609 ORTHO05D005537 1.5e-38 162.9 114 71.1
Peaxi162Scf00270g00828 Petunia axillaris HOM05D004609 ORTHO05D005537 1.9e-38 162.5 96 84.4
Hund02313 Selenicereus undatus HOM05D004609 ORTHO05D005537 1.9e-38 162.5 116 70.7
Nitab4.5_0005621g0170 Nicotiana tabacum HOM05D004609 ORTHO05D005537 2.5e-38 162.2 96 83.3
SGA_v2.0_scaffold80G25763 Striga asiatica HOM05D004609 ORTHO05D005537 2.5e-38 162.2 114 69.3
Cpa.g.sc216.14 Carica papaya HOM05D004609 ORTHO05D005537 4.2e-38 161.4 113 71.7
MBI07_g19316_MAGBIO Magnolia biondii HOM05D004609 ORTHO05D005537 4.2e-38 161.4 108 75.9
Potri.009G025500 Populus trichocarpa HOM05D004609 ORTHO05D005537 4.2e-38 161.4 114 71.1
THA.LOC104799500 Tarenaya hassleriana HOM05D004609 ORTHO05D005537 4.2e-38 161.4 117 66.7
Aa31LG1G12570 Aethionema arabicum HOM05D004609 ORTHO05D005537 5.5e-38 161.0 114 71.1
Hund10347 Selenicereus undatus HOM05D004609 ORTHO05D005537 5.5e-38 161.0 116 70.7
Sed0020077 Sechium edule HOM05D004609 ORTHO05D005537 7.2e-38 160.6 114 71.9
TPR.G15569 Trifolium pratense HOM05D004609 ORTHO05D005537 7.2e-38 160.6 113 72.6
Sc03g0007720 Simmondsia chinensis HOM05D004609 ORTHO05D005537 9.5e-38 160.2 114 71.1
SGA_v2.0_scaffold2G00896 Striga asiatica HOM05D004609 ORTHO05D005537 9.5e-38 160.2 114 71.1
Ah.15g094800 Amaranthus hybridus HOM05D004609 ORTHO05D005537 1.2e-37 159.8 116 69.8
Atru.chr3.3636 Acer truncatum HOM05D004609 ORTHO05D005537 2.1e-37 159.1 102 80.4
EL10Ac7g18241 Beta vulgaris HOM05D004609 ORTHO05D005537 2.1e-37 159.1 116 71.6
Nitab4.5_0005621g0150 Nicotiana tabacum HOM05D004609 ORTHO05D005537 2.8e-37 158.7 96 83.3
unitig_749.g13641 Utricularia gibba HOM05D004609 ORTHO05D005537 2.8e-37 158.7 113 65.5
ATR0115G025 Amborella trichopoda HOM05D004609 ORTHO05D005537 3.6e-37 158.3 111 73.0
Ca_05255_v3 Cicer arietinum L. HOM05D004609 ORTHO05D005537 3.6e-37 158.3 113 69.9
DCAR_013489 Daucus carota HOM05D004609 ORTHO05D005537 3.6e-37 158.3 112 70.5
BraA10t43855Z Brassica rapa HOM05D004609 ORTHO05D005537 4.7e-37 157.9 114 67.5
Aqoxy3G03284 Aquilegia oxysepala HOM05D004609 ORTHO05D005537 6.1e-37 157.5 113 72.6
Lsat_1_v5_gn_5_178620 Lactuca sativa HOM05D004609 ORTHO05D005537 6.1e-37 157.5 114 67.5
Psat1g080680 Pisum sativum HOM05D004609 ORTHO05D005537 6.1e-37 157.5 113 71.7
AUR62001379 Chenopodium quinoa HOM05D004609 ORTHO05D005537 8.0e-37 157.1 116 68.1
Thhalv10014329m.g Eutrema salsugineum HOM05D004609 ORTHO05D005537 8.0e-37 157.1 114 66.7
CsaV3_1G012730 Cucumis sativus L. HOM05D004609 ORTHO05D005537 1.0e-36 156.8 113 67.3
Sp6g22160 Schrenkiella parvula HOM05D004609 ORTHO05D005537 1.0e-36 156.8 114 66.7
Nitab4.5_0006639g0020 Nicotiana tabacum HOM05D004609 ORTHO05D005537 1.4e-36 156.4 95 82.1
Sabra09G0016900 Salix brachista HOM05D004609 ORTHO05D005537 1.4e-36 156.4 114 69.3
BcaB08g36354 Brassica carinata HOM05D004609 ORTHO05D005537 2.3e-36 155.6 114 66.7
CARHR274250 Cardamine hirsuta HOM05D004609 ORTHO05D005537 2.3e-36 155.6 114 65.8
C09p53290 Brassica napus HOM05D004609 ORTHO05D005537 3.0e-36 155.2 114 66.7
BolC9t58203H Brassica oleracea HOM05D004609 ORTHO05D005537 3.0e-36 155.2 114 66.7
A10p17780 Brassica napus HOM05D004609 ORTHO05D005537 5.2e-36 154.5 114 66.7
MELO3C026847.2 Cucumis melo HOM05D004609 ORTHO05D005537 5.2e-36 154.5 113 66.4
AL8G37180 Arabidopsis lyrata HOM05D004609 ORTHO05D005537 8.9e-36 153.7 109 68.8
Carub.0008s2127 Capsella rubella HOM05D004609 ORTHO05D005537 1.5e-35 152.9 111 67.6
Haze_10438 Corylus avellana HOM05D004609 ORTHO05D005537 1.3e-34 149.8 96 77.1
CANSAT54G0849 Cannabis sativa HOM05D004609 ORTHO05D005537 2.2e-34 149.1 97 77.3
HPP92_018599 Vanilla planifolia HOM05D004609 ORTHO05D005537 8.3e-34 147.1 106 67.9
CAN.G604.3 Capsicum annuum HOM05D004609 ORTHO05D005537 4.1e-33 144.8 96 80.2
Zm00001eb007760 Zea mays HOM05D004609 ORTHO05D005537 1.2e-32 143.3 113 63.7
CAN.G1153.4 Capsicum annuum HOM05D004609 ORTHO05D005537 1.3e-31 139.8 105 69.5
CDE09G0954 Ceratophyllum demersum HOM05D004609 ORTHO05D005537 1.3e-31 139.8 107 62.6
BcaC04g19719 Brassica carinata HOM05D004298 ORTHO05D006236 5.0e-31 137.9 97 68.0
Medtr4g059530 Medicago truncatula HOM05D004609 ORTHO05D005537 1.1e-30 136.7 96 72.9
Medtr4g459430 Medicago truncatula HOM05D004609 ORTHO05D005537 1.1e-30 136.7 96 72.9
A03p11090 Brassica napus HOM05D004609 ORTHO05D005537 1.9e-30 136.0 108 59.3
BraA03t10423Z Brassica rapa HOM05D004609 ORTHO05D005537 1.9e-30 136.0 108 59.3
CSS0027878 Camellia sinensis var. sinensis HOM05D004609 ORTHO05D005537 2.5e-30 135.6 97 71.1
SEGI_11191 Sequoiadendron giganteum HOM05D004609 ORTHO05D005537 4.4e-27 124.8 108 55.6
AUR62009522 Chenopodium quinoa HOM05D004609 ORTHO05D005537 5.8e-27 124.4 92 70.7
AUR62025599 Chenopodium quinoa HOM05D004609 ORTHO05D005537 5.8e-27 124.4 92 70.7
AUR62013942 Chenopodium quinoa HOM05D004609 ORTHO05D005537 4.9e-26 121.3 90 67.8
AagrBONN_evm.TU.Sc2ySwM_368.1656 Anthoceros agrestis HOM05D004609 ORTHO05D005537 5.0e-23 111.3 108 49.1
Pp3c1_35360 Physcomitrium patens HOM05D004609 ORTHO05D005537 2.5e-22 109.0 102 49.0
SHI25734 Sapria himalayana HOM05D004609 ORTHO05D005537 7.3e-22 107.5 97 57.7
SMO232G0060 Selaginella moellendorffii HOM05D004609 ORTHO05D005537 7.3e-22 107.5 96 56.2
Mapoly0053s0017 Marchantia polymorpha HOM05D004609 ORTHO05D005537 1.2e-21 106.7 113 48.7
CBR_g32631 Chara braunii HOM05D004609 ORTHO05D005537 2.3e-20 102.4 117 46.2
CBR_g359 Chara braunii HOM05D004609 ORTHO05D005537 2.3e-20 102.4 117 47.0
CSS0039805 Camellia sinensis var. sinensis HOM05D004609 ORTHO05D005537 7.5e-19 97.4 97 55.7
BcaB01g04662 Brassica carinata HOM05D004609 ORTHO05D005537 1.4e-17 93.2 68 63.2
vmacro03196 Vaccinium macrocarpon HOM05D004609 ORTHO05D005537 1.9e-14 82.8 59 72.9
MCO01G111 Micromonas commoda HOM05D004609 ORTHO05D005537 3.3e-14 82.0 101 39.6
PRCOL_00000940 Prasinoderma coloniale HOM05D004609 ORTHO05D005537 8.9e-12 73.9 91 45.1
AL4G25930 Arabidopsis lyrata HOM05D004609 ORTHO05D005537 2.0e-11 72.8 113 39.8
Haze_26358 Corylus avellana HOM05D004609 ORTHO05D005537 2.6e-11 72.4 108 33.3
AUR62017074 Chenopodium quinoa HOM05D004609 ORTHO05D005537 5.4e-09 64.7 92 45.7


User provided reference genes

Program Settings