Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0006630g0030 Nicotiana tabacum HOM05D005454 ORTHO05D006781 1.6e-67 259.2 129 100.0
Nitab4.5_0004200g0060 Nicotiana tabacum HOM05D005454 ORTHO05D006781 1.4e-66 256.1 129 99.2
Peaxi162Scf00286g00452 Petunia axillaris HOM05D005454 ORTHO05D006781 1.1e-63 246.5 128 94.5
PGSC0003DMG400011901 Solanum tuberosum HOM05D005454 ORTHO05D006781 2.1e-62 242.3 128 91.4
Solyc09g098140.4 Solanum lycopersicum HOM05D005454 ORTHO05D006781 1.8e-61 239.2 128 89.8
Sopen09g036090 Solanum pennellii HOM05D005454 ORTHO05D006781 1.8e-61 239.2 128 89.8
CAN.G710.29 Capsicum annuum HOM05D005454 ORTHO05D006781 3.0e-61 238.4 128 89.8
TWI59G0830 Tripterygium wilfordii HOM05D005454 ORTHO05D006781 1.2e-54 216.5 127 80.3
GSVIVG01036708001 Vitis vinifera HOM05D005454 ORTHO05D006781 1.6e-54 216.1 128 78.1
Oeu029453.1 Olea europaea HOM05D005454 ORTHO05D006781 2.1e-54 215.7 128 78.9
Aqoxy1G01376 Aquilegia oxysepala HOM05D005454 ORTHO05D006781 2.7e-54 215.3 128 81.2
Migut.M01498 Erythranthe guttata HOM05D005454 ORTHO05D006781 2.7e-54 215.3 128 82.0
Cc00_g09040 Coffea canephora HOM05D005454 ORTHO05D006781 3.6e-54 214.9 128 80.5
TWI38G1327 Tripterygium wilfordii HOM05D005454 ORTHO05D006781 4.7e-54 214.5 127 78.7
Prupe.4G126700 Prunus persica HOM05D005454 ORTHO05D006781 1.0e-53 213.4 128 78.9
CiPaw.15G112200 Carya illinoinensis HOM05D005454 ORTHO05D006781 1.8e-53 212.6 127 78.7
ClCG02G018790 Citrullus lanatus HOM05D005454 ORTHO05D006781 3.9e-53 211.5 127 79.5
MD10G1217600 Malus domestica HOM05D005454 ORTHO05D006781 3.9e-53 211.5 128 78.1
COL.COLO4_19518 Corchorus olitorius HOM05D005454 ORTHO05D006781 6.7e-53 210.7 127 78.0
TAR626G0894 Trochodendron aralioides HOM05D005454 ORTHO05D006781 6.7e-53 210.7 127 80.3
Ciclev10006210m.g Citrus clementina HOM05D005454 ORTHO05D006781 8.8e-53 210.3 127 76.4
Manes.16G045300 Manihot esculenta HOM05D005454 ORTHO05D006781 1.5e-52 209.5 127 78.0
Sabra08G0060600 Salix brachista HOM05D005454 ORTHO05D006781 2.0e-52 209.1 127 78.0
Eucgr.F04477 Eucalyptus grandis HOM05D005454 ORTHO05D006781 1.3e-51 206.5 130 76.9
Atru.chr1.44 Acer truncatum HOM05D005454 ORTHO05D006781 1.7e-51 206.1 127 76.4
Thecc.02G245200 Theobroma cacao HOM05D005454 ORTHO05D006781 2.2e-51 205.7 130 76.9
Duzib251G0225 Durio zibethinus HOM05D005454 ORTHO05D006781 3.7e-51 204.9 130 75.4
Gohir.A02G014000 Gossypium hirsutum HOM05D005454 ORTHO05D006781 3.7e-51 204.9 123 80.5
Gorai.002G165600 Gossypium raimondii HOM05D005454 ORTHO05D006781 6.3e-51 204.1 123 80.5
QL04p094645 Quercus lobata HOM05D005454 ORTHO05D006781 6.3e-51 204.1 127 77.2
QL04p094846 Quercus lobata HOM05D005454 ORTHO05D006781 6.3e-51 204.1 127 77.2
Nn7g38402 Nelumbo nucifera HOM05D005454 ORTHO05D006781 8.2e-51 203.8 127 74.8
Potri.008G081400 Populus trichocarpa HOM05D005454 ORTHO05D006781 8.2e-51 203.8 126 76.2
SalBow8G4406 Salvia bowleyana HOM05D005454 ORTHO05D006781 8.2e-51 203.8 128 76.6
SGA_v2.0_scaffold186G40175 Striga asiatica HOM05D005454 ORTHO05D006781 1.1e-50 203.4 124 78.2
Gohir.D01G133900 Gossypium hirsutum HOM05D005454 ORTHO05D006781 1.4e-50 203.0 127 76.4
Actinidia00854 Actinidia chinensis HOM05D005454 ORTHO05D006781 1.8e-50 202.6 128 75.8
SalBow8G5040 Salvia bowleyana HOM05D005454 ORTHO05D006781 3.1e-50 201.8 128 75.8
CANSAT56G0738 Cannabis sativa HOM05D005454 ORTHO05D006781 5.3e-50 201.1 119 79.0
CANSAT56G1199 Cannabis sativa HOM05D005454 ORTHO05D006781 5.3e-50 201.1 119 79.0
Sed0024280 Sechium edule HOM05D005454 ORTHO05D006781 5.3e-50 201.1 136 72.1
vmacro09764 Vaccinium macrocarpon HOM05D005454 ORTHO05D006781 7.0e-50 200.7 127 74.8
CsaV3_6G013400 Cucumis sativus L. HOM05D005454 ORTHO05D006781 9.1e-50 200.3 127 75.6
BraA07t31955Z Brassica rapa HOM05D005454 ORTHO05D006781 1.2e-49 199.9 126 76.2
THA.LOC104812391 Tarenaya hassleriana HOM05D005454 ORTHO05D006781 1.6e-49 199.5 121 76.9
Duzib248G0167 Durio zibethinus HOM05D005454 ORTHO05D006781 2.0e-49 199.1 127 77.2
THA.LOC104808143 Tarenaya hassleriana HOM05D005454 ORTHO05D006781 2.0e-49 199.1 121 76.0
CiPaw.15G112600 Carya illinoinensis HOM05D005454 ORTHO05D006781 3.5e-49 198.4 149 67.1
BcaB02g07212 Brassica carinata HOM05D005454 ORTHO05D006781 4.5e-49 198.0 126 75.4
BcaC08g47498 Brassica carinata HOM05D005454 ORTHO05D006781 5.9e-49 197.6 126 75.4
A07p27170 Brassica napus HOM05D005454 ORTHO05D006781 5.9e-49 197.6 126 74.6
C06p53270 Brassica napus HOM05D005454 ORTHO05D006781 5.9e-49 197.6 126 75.4
BolC6t40345H Brassica oleracea HOM05D005454 ORTHO05D006781 5.9e-49 197.6 126 75.4
Cpa.g.sc32.137 Carica papaya HOM05D005454 ORTHO05D006781 5.9e-49 197.6 121 76.9
BcaC08g45360 Brassica carinata HOM05D005454 ORTHO05D006781 7.7e-49 197.2 126 74.6
C06p29920 Brassica napus HOM05D005454 ORTHO05D006781 7.7e-49 197.2 126 74.6
BraA07t30361Z Brassica rapa HOM05D005454 ORTHO05D006781 7.7e-49 197.2 126 74.6
RcHm_v2.0_Chr5g0023201 Rosa chinensis HOM05D005454 ORTHO05D006781 1.3e-48 196.4 128 78.1
BolC6t38153H Brassica oleracea HOM05D005454 ORTHO05D006781 2.2e-48 195.7 126 74.6
Thhalv10019255m.g Eutrema salsugineum HOM05D005454 ORTHO05D006781 3.8e-48 194.9 128 72.7
Lsat_1_v5_gn_5_184081 Lactuca sativa HOM05D005454 ORTHO05D006781 3.8e-48 194.9 113 80.5
Aa31LG4G1640 Aethionema arabicum HOM05D005454 ORTHO05D006781 8.5e-48 193.7 126 71.4
Rhsim04G0003500 Rhododendron simsii HOM05D005454 ORTHO05D006781 8.5e-48 193.7 143 67.1
PSO675G7587 Papaver somniferum HOM05D005454 ORTHO05D006781 1.1e-47 193.4 118 77.1
PGR102G3369 Punica granatum HOM05D005454 ORTHO05D006781 1.1e-47 193.4 116 77.6
unitig_32.g11075 Utricularia gibba HOM05D005454 ORTHO05D006781 1.9e-47 192.6 114 79.8
AT1G79390 Arabidopsis thaliana HOM05D005454 ORTHO05D006781 3.2e-47 191.8 126 71.4
FvH4_3g13970 Fragaria vesca HOM05D005454 ORTHO05D006781 4.2e-47 191.4 128 77.3
FAN11G3450 Fragaria x ananassa HOM05D005454 ORTHO05D006781 4.2e-47 191.4 128 77.3
FAN16G0850 Fragaria x ananassa HOM05D005454 ORTHO05D006781 5.5e-47 191.0 128 76.6
FAN21G1174 Fragaria x ananassa HOM05D005454 ORTHO05D006781 5.5e-47 191.0 128 76.6
HanXRQChr13g0408901 Helianthus annuus HOM05D005454 ORTHO05D006781 5.5e-47 191.0 121 75.2
HanXRQChr13g0408931 Helianthus annuus HOM05D005454 ORTHO05D006781 5.5e-47 191.0 121 75.2
Lj3g0001328 Lotus japonicus HOM05D005454 ORTHO05D006781 9.4e-47 190.3 117 76.1
AL2G40000 Arabidopsis lyrata HOM05D005454 ORTHO05D006781 2.1e-46 189.1 123 72.4
MSTRG.16083 Avicennia marina HOM05D005454 ORTHO05D006781 2.1e-46 189.1 117 76.9
Medtr8g447300 Medicago truncatula HOM05D005454 ORTHO05D006781 2.1e-46 189.1 113 76.1
Carub.0002s2625 Capsella rubella HOM05D005454 ORTHO05D006781 3.6e-46 188.3 126 70.6
Lalb_Chr03g0031911 Lupinus albus HOM05D005454 ORTHO05D006781 3.6e-46 188.3 118 73.7
CiPaw.15G112400 Carya illinoinensis HOM05D005454 ORTHO05D006781 8.0e-46 187.2 141 66.7
Glyma.11G026500 Glycine max HOM05D005454 ORTHO05D006781 1.0e-45 186.8 117 75.2
MD05G1239400 Malus domestica HOM05D005454 ORTHO05D006781 1.0e-45 186.8 118 74.6
Sc18g0003140 Simmondsia chinensis HOM05D005454 ORTHO05D006781 1.4e-45 186.4 119 74.8
Ca_26272_v3 Cicer arietinum L. HOM05D005454 ORTHO05D006781 1.8e-45 186.0 114 76.3
Sabra10G0134500 Salix brachista HOM05D005454 ORTHO05D006781 2.3e-45 185.7 127 72.4
Glyma.01G216400 Glycine max HOM05D005454 ORTHO05D006781 4.0e-45 184.9 117 74.4
Zm00001eb241290 Zea mays HOM05D005454 ORTHO05D006781 4.0e-45 184.9 125 72.8
Hund10936 Selenicereus undatus HOM05D005454 ORTHO05D006781 5.2e-45 184.5 125 72.0
TPR.G8202 Trifolium pratense HOM05D005454 ORTHO05D006781 8.8e-45 183.7 116 76.7
FAN25G3791 Fragaria x ananassa HOM05D005454 ORTHO05D006781 1.2e-44 183.3 127 74.0
ECA240G0828 Erigeron canadensis HOM05D005454 ORTHO05D006781 2.0e-44 182.6 128 69.5
Os02g0495900 Oryza sativa ssp. japonica HOM05D005454 ORTHO05D006781 2.0e-44 182.6 128 71.1
Dinv42456 Davidia involucrata HOM05D005454 ORTHO05D006781 2.6e-44 182.2 118 74.6
Ah.02g115510 Amaranthus hybridus HOM05D005454 ORTHO05D006781 3.3e-44 181.8 125 70.4
MBI13_g09219_MAGBIO Magnolia biondii HOM05D005454 ORTHO05D006781 3.3e-44 181.8 123 74.0
Phvul.002G154100 Phaseolus vulgaris HOM05D005454 ORTHO05D006781 7.5e-44 180.6 117 70.9
VMungo1215G2509 Vigna mungo HOM05D005454 ORTHO05D006781 7.5e-44 180.6 117 72.6
ATR0820G041 Amborella trichopoda HOM05D005454 ORTHO05D006781 2.8e-43 178.7 118 72.9
MELO3C019617.2 Cucumis melo HOM05D005454 ORTHO05D006781 2.8e-43 178.7 147 62.6
Psat4g141200 Pisum sativum HOM05D005454 ORTHO05D006781 2.8e-43 178.7 113 74.3
arahy.Tifrunner.gnm1.ann1.DLUG3E Arachis hypogaea HOM05D005454 ORTHO05D006781 4.8e-43 177.9 122 71.3
EL10Ac5g12502 Beta vulgaris HOM05D005454 ORTHO05D006781 8.2e-43 177.2 125 69.6
arahy.Tifrunner.gnm1.ann1.TLTS2V Arachis hypogaea HOM05D005454 ORTHO05D006781 1.1e-42 176.8 125 69.6
AUR62030518 Chenopodium quinoa HOM05D005454 ORTHO05D006781 2.7e-41 172.2 127 67.7
AUR62030774 Chenopodium quinoa HOM05D005454 ORTHO05D006781 3.5e-41 171.8 127 66.9
SEGI_00588 Sequoiadendron giganteum HOM05D005454 ORTHO05D006781 9.4e-39 163.7 129 63.6
CDE02G1314 Ceratophyllum demersum HOM05D000236 ORTHO05D000192 3.0e-29 132.1 88 75.0
Sp5g34440 Schrenkiella parvula HOM05D005454 ORTHO05D006781 5.7e-28 127.9 83 74.7
Pp3c27_5100 Physcomitrium patens HOM05D005454 ORTHO05D006781 3.7e-27 125.2 112 54.5
AagrBONN_evm.TU.Sc2ySwM_117.1988 Anthoceros agrestis HOM05D005454 ORTHO05D006781 1.0e-24 117.1 112 50.9
Gohir.A03G171875 Gossypium hirsutum HOM05D005454 ORTHO05D006781 1.7e-24 116.3 73 71.2
Mapoly0011s0156 Marchantia polymorpha HOM05D005454 ORTHO05D006781 2.3e-24 115.9 112 51.8
Haze_01788 Corylus avellana HOM05D005454 ORTHO05D006781 1.5e-23 113.2 72 66.7
HPP92_015989 Vanilla planifolia HOM05D005454 ORTHO05D006781 2.5e-23 112.5 73 69.9
Haze_08480 Corylus avellana HOM05D005454 ORTHO05D006781 3.3e-23 112.1 68 72.1
Cfa017755 Carpinus fangiana HOM05D005454 ORTHO05D006781 4.3e-23 111.7 68 70.6
Haze_18487 Corylus avellana HOM05D005454 ORTHO05D006781 5.6e-23 111.3 67 71.6
Hma1.2p1_0151F.1_g066990 Hydrangea macrophylla HOM05D005454 ORTHO05D006781 9.5e-23 110.5 68 70.6
CSS0036802 Camellia sinensis var. sinensis HOM05D005454 ORTHO05D006781 2.1e-22 109.4 67 73.1
A07p44460 Brassica napus HOM05D005454 ORTHO05D006781 3.6e-22 108.6 68 72.1
Nn7g38396 Nelumbo nucifera HOM05D005454 ORTHO05D006781 1.4e-21 106.7 77 61.0
Cfa017757 Carpinus fangiana HOM05D005454 ORTHO05D006781 1.1e-18 97.1 59 81.4
CARHR073050 Cardamine hirsuta HOM05D005454 ORTHO05D006781 2.4e-18 95.9 57 82.5
CBR_g2846 Chara braunii HOM05D005454 ORTHO05D006781 4.1e-18 95.1 114 43.0
QL04p094659 Quercus lobata HOM05D005454 ORTHO05D006781 1.2e-17 93.6 60 80.0
Atru.chr1.31 Acer truncatum HOM05D005454 ORTHO05D006781 1.6e-17 93.2 81 61.7
BolC8t48807H Brassica oleracea HOM05D005454 ORTHO05D006781 2.7e-17 92.4 59 74.6
Potri.010G174700 Populus trichocarpa HOM05D005454 ORTHO05D006781 2.7e-17 92.4 59 78.0
Actinidia03633 Actinidia chinensis HOM05D005454 ORTHO05D012925 3.5e-17 92.0 63 74.6
CDE04G2596 Ceratophyllum demersum HOM05D005454 ORTHO05D006781 5.9e-17 91.3 71 60.6
CARHR073040 Cardamine hirsuta HOM05D005454 ORTHO05D006781 3.9e-16 88.6 58 65.5
C06p00690 Brassica napus HOM05D005454 ORTHO05D006781 6.2e-14 81.3 53 73.6
BolC6t35206H Brassica oleracea HOM05D005454 ORTHO05D006781 6.2e-14 81.3 53 73.6
Cc00_g28770 Coffea canephora HOM05D001769 ORTHO05D001695 6.2e-14 81.3 93 48.4
C03p71170 Brassica napus HOM05D005454 ORTHO05D006781 1.1e-13 80.5 53 73.6
BcaC08g42854 Brassica carinata HOM05D005454 ORTHO05D006781 1.4e-13 80.1 46 80.4
Gohir.A04G138000 Gossypium hirsutum HOM05D005454 ORTHO05D006781 2.3e-13 79.3 57 66.7
SMO367G0923 Selaginella moellendorffii HOM05D005454 ORTHO05D006781 4.0e-13 78.6 121 37.2
DCAR_013713 Daucus carota HOM05D005454 ORTHO05D006781 5.2e-13 78.2 119 41.2
RcHm_v2.0_Chr5g0023191 Rosa chinensis HOM05D005454 ORTHO05D006781 7.5e-12 74.3 69 56.5
SGA_v2.0_scaffold29G12256 Striga asiatica HOM05D005454 ORTHO05D006781 1.1e-07 60.5 44 61.4


User provided reference genes

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