Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0006573g0020 Nicotiana tabacum HOM05D007621 ORTHO05D009631 0.0e+00 1237.6 598 100.0
Nitab4.5_0000190g0070 Nicotiana tabacum HOM05D007621 ORTHO05D009631 0.0e+00 1151.3 589 95.2
CAN.G424.15 Capsicum annuum HOM05D007621 ORTHO05D009631 8.2e-303 1043.1 592 85.8
Peaxi162Scf00083g00022 Petunia axillaris HOM05D007621 ORTHO05D009631 1.5e-280 969.1 598 81.3
PGSC0003DMG400022357 Solanum tuberosum HOM05D007621 ORTHO05D009631 1.7e-268 929.1 537 85.1
Sopen02g023940 Solanum pennellii HOM05D007621 ORTHO05D009631 6.8e-257 890.6 540 81.7
Solyc02g079140.2 Solanum lycopersicum HOM05D007621 ORTHO05D009631 8.8e-257 890.2 540 81.5
CSS0049226 Camellia sinensis var. sinensis HOM05D007621 ORTHO05D009631 7.6e-200 701.0 647 58.3
Nn1g03894 Nelumbo nucifera HOM05D007621 ORTHO05D009631 2.4e-198 696.0 676 56.2
GSVIVG01003190001 Vitis vinifera HOM05D007621 ORTHO05D009631 4.2e-198 695.3 673 56.6
Dinv40478 Davidia involucrata HOM05D007621 ORTHO05D009631 7.4e-195 684.5 615 60.0
TAR624G0533 Trochodendron aralioides HOM05D007621 ORTHO05D009631 2.8e-194 682.6 674 55.6
QL04p018250 Quercus lobata HOM05D007621 ORTHO05D009631 2.4e-193 679.5 666 56.5
Hma1.2p1_1182F.1_g264810 Hydrangea macrophylla HOM05D007621 ORTHO05D009631 1.5e-192 676.8 628 58.9
Rhsim02G0119600 Rhododendron simsii HOM05D007621 ORTHO05D009631 4.2e-190 668.7 627 58.2
Actinidia11809 Actinidia chinensis HOM05D007621 ORTHO05D009631 1.6e-189 666.8 463 71.7
MBI02_g06002_MAGBIO Magnolia biondii HOM05D007621 ORTHO05D009631 2.7e-189 666.0 677 54.5
Cc02_g12430 Coffea canephora HOM05D007621 ORTHO05D009631 1.9e-187 659.8 678 53.7
MSTRG.14678 Avicennia marina HOM05D007621 ORTHO05D009631 1.8e-185 653.3 632 57.0
SGA_v2.0_scaffold49G18280 Striga asiatica HOM05D007621 ORTHO05D009631 1.7e-183 646.7 601 59.4
SalBow7G3398 Salvia bowleyana HOM05D007621 ORTHO05D009631 3.9e-180 635.6 481 67.6
Lj1C1213T4 Lonicera japonica HOM05D007621 ORTHO05D009631 1.9e-179 633.3 613 56.3
SalBow7G0238 Salvia bowleyana HOM05D007621 ORTHO05D009631 1.9e-179 633.3 481 67.4
Manes.16G020600 Manihot esculenta HOM05D007621 ORTHO05D009631 5.7e-179 631.7 646 53.1
ATR0693G363 Amborella trichopoda HOM05D007621 ORTHO05D009631 7.4e-179 631.3 427 70.5
Sed0011037 Sechium edule HOM05D007621 ORTHO05D009631 4.1e-177 625.5 508 61.8
ClCG03G005520 Citrullus lanatus HOM05D007621 ORTHO05D009631 6.9e-177 624.8 427 69.3
Haze_06574 Corylus avellana HOM05D007621 ORTHO05D009631 6.9e-177 624.8 646 55.3
HPP92_005890 Vanilla planifolia HOM05D007621 ORTHO05D009631 5.9e-176 621.7 627 55.2
Sc14g0001480 Simmondsia chinensis HOM05D007621 ORTHO05D009631 2.5e-174 616.3 555 59.5
Eucgr.E03798 Eucalyptus grandis HOM05D007621 ORTHO05D009631 5.5e-174 615.1 632 54.0
FvH4_3g03980 Fragaria vesca HOM05D007621 ORTHO05D009631 5.5e-174 615.1 641 54.1
CDE12G0841 Ceratophyllum demersum HOM05D007621 ORTHO05D009631 2.1e-173 613.2 502 62.2
FAN11G2677 Fragaria x ananassa HOM05D007621 ORTHO05D009631 5.1e-172 608.6 634 53.6
Ciclev10014484m.g Citrus clementina HOM05D007621 ORTHO05D009631 6.7e-172 608.2 654 51.8
ECA248G3190 Erigeron canadensis HOM05D007621 ORTHO05D009631 1.1e-171 607.4 539 58.4
RcHm_v2.0_Chr5g0006311 Rosa chinensis HOM05D007621 ORTHO05D009631 5.7e-171 605.1 642 53.4
Prupe.4G036900 Prunus persica HOM05D007621 ORTHO05D009631 9.7e-171 604.4 620 53.1
TWI38G0795 Tripterygium wilfordii HOM05D007621 ORTHO05D009631 2.8e-170 602.8 648 52.9
Cfa000351 Carpinus fangiana HOM05D007621 ORTHO05D009631 4.8e-170 602.1 626 55.1
CsaV3_1G011790 Cucumis sativus L. HOM05D007621 ORTHO05D009631 9.1e-169 597.8 427 67.0
SEGI_29793 Sequoiadendron giganteum HOM05D007621 ORTHO05D009631 9.1e-169 597.8 427 67.2
Glyma.15G067500 Glycine max HOM05D007621 ORTHO05D009631 3.4e-168 595.9 495 61.2
MELO3C002556.2 Cucumis melo HOM05D007621 ORTHO05D009631 1.0e-167 594.3 608 54.4
AUR62014718 Chenopodium quinoa HOM05D007621 ORTHO05D009631 3.8e-167 592.4 482 63.7
VMungo0540G1980 Vigna mungo HOM05D007621 ORTHO05D009631 8.5e-167 591.3 570 55.8
AUR62016897 Chenopodium quinoa HOM05D007621 ORTHO05D009631 1.4e-166 590.5 500 62.4
CDE01G0329 Ceratophyllum demersum HOM05D007621 ORTHO05D009631 2.5e-166 589.7 424 67.7
Lj6g0025549 Lotus japonicus HOM05D007621 ORTHO05D009631 2.5e-166 589.7 643 52.3
MD05G1325500 Malus domestica HOM05D007621 ORTHO05D009631 3.2e-166 589.3 598 55.2
Os04g0636000 Oryza sativa ssp. japonica HOM05D007621 ORTHO05D009631 6.7e-164 581.6 462 64.1
EL10Ac8g20530 Beta vulgaris HOM05D007621 ORTHO05D009631 1.1e-163 580.9 459 65.6
PGR042G2283 Punica granatum HOM05D007621 ORTHO05D009631 1.7e-162 577.0 616 52.4
Lsat_1_v5_gn_1_126820 Lactuca sativa HOM05D007621 ORTHO05D009631 4.8e-162 575.5 507 59.0
Zm00001eb069260 Zea mays HOM05D007621 ORTHO05D009631 5.3e-161 572.0 438 64.8
HanXRQChr11g0338441 Helianthus annuus HOM05D007621 ORTHO05D009631 1.0e-159 567.8 595 52.9
FAN16G2797 Fragaria x ananassa HOM05D007621 ORTHO05D009631 4.2e-158 562.4 635 51.2
Psat1g208720 Pisum sativum HOM05D007621 ORTHO05D009631 7.2e-158 561.6 439 62.9
arahy.Tifrunner.gnm1.ann1.M1GH8V Arachis hypogaea HOM05D007621 ORTHO05D009631 2.7e-157 559.7 612 52.3
Hund23606 Selenicereus undatus HOM05D007621 ORTHO05D009631 8.0e-157 558.1 589 55.7
Ca_00253_v3 Cicer arietinum L. HOM05D007621 ORTHO05D009631 4.4e-155 552.4 459 60.8
CDE01G0148 Ceratophyllum demersum HOM05D007621 ORTHO05D009631 9.1e-153 544.7 417 64.5
TPR.G36840 Trifolium pratense HOM05D007621 ORTHO05D009631 2.2e-151 540.0 646 49.1
Mapoly0104s0019 Marchantia polymorpha HOM05D007621 ORTHO05D009631 1.9e-150 537.0 416 62.7
arahy.Tifrunner.gnm1.ann1.14L1JV Arachis hypogaea HOM05D007621 ORTHO05D009631 2.5e-150 536.6 612 50.5
Phvul.006G192200 Phaseolus vulgaris HOM05D007621 ORTHO05D009631 1.8e-145 520.4 661 47.4
PGR042G3240 Punica granatum HOM05D007621 ORTHO05D009631 1.1e-137 494.6 477 54.5
Zm00001eb081180 Zea mays HOM05D007621 ORTHO05D009631 1.0e-132 478.0 385 62.6
Thecc.06G199600 Theobroma cacao HOM05D007621 ORTHO05D009631 2.2e-122 443.7 467 51.2
Aqoxy1G02733 Aquilegia oxysepala HOM05D007621 ORTHO05D009631 4.9e-114 416.0 292 68.2
CBR_g725 Chara braunii HOM05D007621 ORTHO05D009631 3.5e-112 409.8 417 49.9
Eucgr.E03700 Eucalyptus grandis HOM05D007621 ORTHO05D009631 2.5e-102 377.1 484 47.3
Zm00001eb274720 Zea mays HOM05D007621 ORTHO05D009631 1.0e-95 355.1 287 64.1
CiPaw.09G157900 Carya illinoinensis HOM05D007621 ORTHO05D009631 4.0e-84 316.6 483 44.3
Oeu050825.1 Olea europaea HOM05D007621 ORTHO05D009631 1.5e-83 314.7 376 52.9
RcHm_v2.0_Chr7g0240451 Rosa chinensis HOM05D007621 ORTHO05D009631 3.4e-75 287.0 364 45.1
Medtr2g011780 Medicago truncatula HOM05D007621 ORTHO05D009631 1.0e-74 285.4 288 53.1
FAN25G1179 Fragaria x ananassa HOM05D007621 ORTHO05D009631 3.5e-72 276.9 387 48.8
arahy.Tifrunner.gnm1.ann1.C857YU Arachis hypogaea HOM05D007621 ORTHO05D009631 2.9e-66 257.3 280 50.0
Psat1g210360 Pisum sativum HOM05D007621 ORTHO05D009631 6.1e-56 223.0 189 58.2
FvH4_6g02023 Fragaria vesca HOM05D007621 ORTHO05D009631 1.0e-39 169.1 133 54.9
Glyma.13G246302 Glycine max HOM05D007621 ORTHO05D009631 1.9e-33 148.3 148 55.4
Atru.chr10.2012 Acer truncatum HOM05D007621 ORTHO05D009631 6.1e-32 143.3 133 55.6
Cre02.g116800 Chlamydomonas reinhardtii HOM05D007621 ORTHO05D009631 1.9e-25 121.7 520 25.8
Potri.004G034301 Populus trichocarpa HOM05D007621 ORTHO05D009631 9.5e-25 119.4 78 64.1
SGA_v2.0_scaffold32G13107 Striga asiatica HOM05D007621 ORTHO05D009631 5.7e-22 110.2 139 47.5
Cpa.g.sc27.127 Carica papaya HOM05D007621 ORTHO05D009631 1.3e-21 109.0 127 51.2
AagrBONN_evm.TU.Sc2ySwM_340.408 Anthoceros agrestis HOM05D007621 ORTHO05D009631 7.5e-14 83.2 86 54.7
MCO11G679 Micromonas commoda HOM05D000032 ORTHO05D028824 7.5e-14 83.2 207 32.4
Atru.chr10.2011 Acer truncatum HOM05D007621 ORTHO05D009631 7.0e-12 76.6 47 66.0
SGA_v2.0_scaffold86G26914 Striga asiatica HOM05D007621 ORTHO05D009631 7.0e-12 76.6 57 61.4
Cre03.g188750 Chlamydomonas reinhardtii HOM05D000032 ORTHO05D028824 8.6e-10 69.7 192 30.2
Sabra04G0020100 Salix brachista HOM05D007621 ORTHO05D009631 1.9e-09 68.6 169 29.0
SGA_v2.0_scaffold26G11386 Striga asiatica HOM05D007621 ORTHO05D009631 3.6e-08 64.3 66 51.5
Haze_26842 Corylus avellana HOM05D000032 ORTHO05D028824 1.4e-07 62.4 149 30.9
EL10Ac8g20531 Beta vulgaris HOM05D007621 ORTHO05D009631 1.2e-06 59.3 280 29.6


User provided reference genes

Program Settings