Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0006570g0030 Nicotiana tabacum HOM05D002237 ORTHO05D002213 6.1e-98 361.3 256 100.0
Peaxi162Scf00259g00111 Petunia axillaris HOM05D002237 ORTHO05D002213 1.1e-43 181.0 257 68.9
Nitab4.5_0000095g0170 Nicotiana tabacum HOM05D002237 ORTHO05D002213 4.8e-34 149.1 254 50.8
PGSC0003DMG400017835 Solanum tuberosum HOM05D002237 ORTHO05D002213 1.8e-33 147.1 257 47.1
Nitab4.5_0003648g0010 Nicotiana tabacum HOM05D002237 ORTHO05D002213 9.9e-32 141.4 255 49.4
Peaxi162Scf01461g00029 Petunia axillaris HOM05D002237 ORTHO05D002213 5.5e-30 135.6 252 45.2
Sopen07g018730 Solanum pennellii HOM05D002237 ORTHO05D002213 5.6e-27 125.6 257 45.5
Solyc07g039380.3 Solanum lycopersicum HOM05D002237 ORTHO05D002213 3.0e-20 103.2 261 36.0
Dinv36772 Davidia involucrata HOM05D002237 ORTHO05D002213 1.1e-19 101.3 244 33.6
PGSC0003DMG400021389 Solanum tuberosum HOM05D002237 ORTHO05D002213 1.9e-19 100.5 252 39.7
Oeu041234.1 Olea europaea HOM05D002237 ORTHO05D002213 1.3e-18 97.8 253 34.4
Hma1.2p1_0482F.1_g162400 Hydrangea macrophylla HOM05D002237 ORTHO05D002213 1.4e-17 94.4 272 30.9
Aqoxy7G01205 Aquilegia oxysepala HOM05D002237 ORTHO05D002213 4.1e-17 92.8 255 32.2
Cc06_g11460 Coffea canephora HOM05D002237 ORTHO05D002213 3.4e-16 89.7 263 30.8
Solyc05g018820.1 Solanum lycopersicum HOM05D002237 ORTHO05D002213 3.4e-16 89.7 252 35.7
Sopen05g016140 Solanum pennellii HOM05D002237 ORTHO05D002213 3.4e-16 89.7 252 35.7
Actinidia25249 Actinidia chinensis HOM05D002237 ORTHO05D002213 1.7e-15 87.4 277 33.2
MSTRG.14057 Avicennia marina HOM05D002237 ORTHO05D002213 1.1e-14 84.7 276 28.6
PSO210G3168 Papaver somniferum HOM05D002237 ORTHO05D002213 1.1e-14 84.7 259 30.5
Gohir.D06G086900 Gossypium hirsutum HOM05D002237 ORTHO05D002213 1.4e-14 84.3 292 29.8
PSO210G1183 Papaver somniferum HOM05D002237 ORTHO05D002213 1.4e-14 84.3 259 30.1
Phvul.001G036100 Phaseolus vulgaris HOM05D002237 ORTHO05D002213 2.5e-14 83.6 304 28.3
Gorai.010G100300 Gossypium raimondii HOM05D002237 ORTHO05D002213 3.2e-14 83.2 289 29.8
PSO210G0663 Papaver somniferum HOM05D002237 ORTHO05D002213 3.2e-14 83.2 259 29.7
CANSAT25G0876 Cannabis sativa HOM05D002237 ORTHO05D002213 5.5e-14 82.4 275 34.5
Rhsim05G0020400 Rhododendron simsii HOM05D002237 ORTHO05D002213 7.2e-14 82.0 280 44.6
DCAR_000797 Daucus carota HOM05D002237 ORTHO05D002213 9.4e-14 81.6 259 35.1
Dinv27989 Davidia involucrata HOM05D002237 ORTHO05D002213 1.2e-13 81.3 253 28.9
Gohir.A06G087500 Gossypium hirsutum HOM05D002237 ORTHO05D002213 1.2e-13 81.3 289 30.8
HanXRQChr03g0060491 Helianthus annuus HOM05D002237 ORTHO05D002213 1.2e-13 81.3 285 34.4
THA.LOC104803728 Tarenaya hassleriana HOM05D002237 ORTHO05D002213 2.7e-13 80.1 286 30.1
Cfa017959 Carpinus fangiana HOM05D002237 ORTHO05D002213 3.6e-13 79.7 292 35.6
Dinv22895 Davidia involucrata HOM05D002237 ORTHO05D002213 3.6e-13 79.7 268 34.7
MD15G1059100 Malus domestica HOM05D002237 ORTHO05D002213 7.9e-13 78.6 299 30.4
MSTRG.6063 Avicennia marina HOM05D002237 ORTHO05D002213 1.0e-12 78.2 254 30.3
vmacro17244 Vaccinium macrocarpon HOM05D002237 ORTHO05D002213 1.0e-12 78.2 271 46.5
VMungo0647G2239 Vigna mungo HOM05D002237 ORTHO05D002213 1.0e-12 78.2 299 32.4
Actinidia26073 Actinidia chinensis HOM05D002237 ORTHO05D002213 1.8e-12 77.4 264 29.5
DCAR_004423 Daucus carota HOM05D002237 ORTHO05D002213 2.3e-12 77.0 284 32.0
Nn8g38853 Nelumbo nucifera HOM05D002237 ORTHO05D002213 3.0e-12 76.6 250 30.0
Oeu041228.1 Olea europaea HOM05D002237 ORTHO05D002213 3.9e-12 76.3 259 30.1
MSTRG.19510 Avicennia marina HOM05D002237 ORTHO05D002213 5.1e-12 75.9 244 31.6
CARHR114840 Cardamine hirsuta HOM05D002237 ORTHO05D002213 5.1e-12 75.9 282 31.2
THA.LOC104803792 Tarenaya hassleriana HOM05D002237 ORTHO05D002213 6.7e-12 75.5 290 27.6
A09p47750 Brassica napus HOM05D002237 ORTHO05D002213 8.8e-12 75.1 263 34.2
FAN24G2308 Fragaria x ananassa HOM05D002237 ORTHO05D002213 8.8e-12 75.1 298 34.9
CSS0012916 Camellia sinensis var. sinensis HOM05D002237 ORTHO05D002213 1.5e-11 74.3 260 31.5
CSS0026514 Camellia sinensis var. sinensis HOM05D002237 ORTHO05D002213 2.0e-11 73.9 260 29.6
CAN.G352.21 Capsicum annuum HOM05D002237 ORTHO05D002213 2.0e-11 73.9 308 27.3
Aa31LG5G9660 Aethionema arabicum HOM05D002237 ORTHO05D002213 3.3e-11 73.2 294 34.0
Hma1.2p1_1051F.1_g252130 Hydrangea macrophylla HOM05D002237 ORTHO05D002213 3.3e-11 73.2 61 67.2
CSS0010318 Camellia sinensis var. sinensis HOM05D002237 ORTHO05D002213 4.3e-11 72.8 305 45.9
AL4G18280 Arabidopsis lyrata HOM05D002237 ORTHO05D002213 5.7e-11 72.4 280 28.6
Glyma.14G095300 Glycine max HOM05D002237 ORTHO05D002213 5.7e-11 72.4 306 33.3
Nn6g35487 Nelumbo nucifera HOM05D002237 ORTHO05D002213 5.7e-11 72.4 263 31.9
FAN15G1416 Fragaria x ananassa HOM05D002237 ORTHO05D002213 7.4e-11 72.0 286 34.3
Lsat_1_v5_gn_6_13421 Lactuca sativa HOM05D002237 ORTHO05D002213 7.4e-11 72.0 318 28.6
Lj7A676T37 Lonicera japonica HOM05D002237 ORTHO05D002213 7.4e-11 72.0 58 63.8
AT2G26110 Arabidopsis thaliana HOM05D002237 ORTHO05D002213 9.7e-11 71.6 284 29.6
TWI63G0889 Tripterygium wilfordii HOM05D002237 ORTHO05D002213 9.7e-11 71.6 281 31.7
BraA09t40233Z Brassica rapa HOM05D002237 ORTHO05D002213 1.3e-10 71.2 264 34.1
FAN20G2042 Fragaria x ananassa HOM05D002237 ORTHO05D002213 1.3e-10 71.2 291 34.0
RcHm_v2.0_Chr6g0310991 Rosa chinensis HOM05D002237 ORTHO05D002213 1.3e-10 71.2 289 30.1
Manes.16G080900 Manihot esculenta HOM05D002237 ORTHO05D002213 1.7e-10 70.9 295 26.1
Oeu041232.1 Olea europaea HOM05D002237 ORTHO05D002213 1.7e-10 70.9 251 30.3
FvH4_2g31830 Fragaria vesca HOM05D002237 ORTHO05D002213 2.2e-10 70.5 298 33.6
Duzib150G1021 Durio zibethinus HOM05D002237 ORTHO05D002213 2.8e-10 70.1 296 29.7
FAN27G2230 Fragaria x ananassa HOM05D002237 ORTHO05D002213 3.7e-10 69.7 291 35.4
MD08G1062500 Malus domestica HOM05D002237 ORTHO05D002213 3.7e-10 69.7 277 29.2
Medtr1g016100 Medicago truncatula HOM05D002237 ORTHO05D002213 4.8e-10 69.3 299 32.4
Prupe.1G411600 Prunus persica HOM05D002237 ORTHO05D002213 4.8e-10 69.3 302 28.5
MSTRG.1684 Avicennia marina HOM05D002237 ORTHO05D002213 6.3e-10 68.9 285 28.8
BcaC07g39780 Brassica carinata HOM05D002237 ORTHO05D002213 6.3e-10 68.9 260 36.5
C08p29980 Brassica napus HOM05D002237 ORTHO05D002213 6.3e-10 68.9 260 36.5
BolC8t50607H Brassica oleracea HOM05D002237 ORTHO05D002213 6.3e-10 68.9 260 36.5
Oeu041233.1 Olea europaea HOM05D002237 ORTHO05D002213 6.3e-10 68.9 247 30.0
Thecc.09G054200 Theobroma cacao HOM05D002237 ORTHO05D002213 8.2e-10 68.6 305 28.2
TWI34G0810 Tripterygium wilfordii HOM05D002237 ORTHO05D002213 8.2e-10 68.6 278 28.8
Cpa.g.sc7.182 Carica papaya HOM05D002237 ORTHO05D002213 1.1e-09 68.2 307 26.7
Ciclev10008860m.g Citrus clementina HOM05D002237 ORTHO05D002213 1.1e-09 68.2 322 28.3
HanXRQChr07g0192621 Helianthus annuus HOM05D002237 ORTHO05D002213 1.1e-09 68.2 58 60.3
Actinidia39713 Actinidia chinensis HOM05D002237 ORTHO05D002213 1.4e-09 67.8 272 34.9
MD15G1207800 Malus domestica HOM05D002237 ORTHO05D002213 1.4e-09 67.8 310 31.9
Prupe.7G209100 Prunus persica HOM05D002237 ORTHO05D002213 1.4e-09 67.8 248 36.7
Sp4g05990 Schrenkiella parvula HOM05D002237 ORTHO05D002213 1.4e-09 67.8 272 28.7
TAR626G0565 Trochodendron aralioides HOM05D001162 ORTHO05D001218 1.8e-09 67.4 159 33.3
SalBow4G0805 Salvia bowleyana HOM05D002237 ORTHO05D002213 4.1e-09 66.2 261 29.9
CiPaw.15G038600 Carya illinoinensis HOM05D002237 ORTHO05D002213 5.3e-09 65.9 58 58.6
SGA_v2.0_scaffold163G38027 Striga asiatica HOM05D002237 ORTHO05D002213 5.3e-09 65.9 309 26.9
Thhalv10002336m.g Eutrema salsugineum HOM05D002237 ORTHO05D002213 6.9e-09 65.5 279 30.5
Manes.03G034300 Manihot esculenta HOM05D002237 ORTHO05D002213 9.1e-09 65.1 249 34.5
Oeu041231.1 Olea europaea HOM05D002237 ORTHO05D002213 9.1e-09 65.1 248 30.2
PGR031G2556 Punica granatum HOM05D002237 ORTHO05D002213 9.1e-09 65.1 320 25.3
TPR.G13085 Trifolium pratense HOM05D002237 ORTHO05D002213 9.1e-09 65.1 301 31.6
MBI04_g31165_MAGBIO Magnolia biondii HOM05D002237 ORTHO05D002213 1.2e-08 64.7 58 55.2
Oeu016763.1 Olea europaea HOM05D002237 ORTHO05D002213 1.2e-08 64.7 110 42.7
Sopen08g018730 Solanum pennellii HOM05D002237 ORTHO05D002213 1.2e-08 64.7 335 25.7
Gohir.A07G022100 Gossypium hirsutum HOM05D002237 ORTHO05D002213 1.5e-08 64.3 298 26.5
Migut.E01567 Erythranthe guttata HOM05D002237 ORTHO05D002213 2.0e-08 63.9 297 30.3
Sed0018033 Sechium edule HOM05D002237 ORTHO05D002213 2.0e-08 63.9 58 62.1
TAR624G1451 Trochodendron aralioides HOM05D002237 ORTHO05D002213 2.0e-08 63.9 58 56.9
ECA240G0667 Erigeron canadensis HOM05D002237 ORTHO05D002213 2.6e-08 63.5 297 29.6
Oeu006001.1 Olea europaea HOM05D002237 ORTHO05D002213 3.4e-08 63.2 59 61.0
Gohir.D07G022000 Gossypium hirsutum HOM05D002237 ORTHO05D002213 4.5e-08 62.8 282 27.3
Hma1.2p1_0163F.1_g073030 Hydrangea macrophylla HOM05D002237 ORTHO05D002213 4.5e-08 62.8 61 60.7
Hma1.2p1_2410F.1_g321555 Hydrangea macrophylla HOM05D002237 ORTHO05D002213 4.5e-08 62.8 61 60.7
Actinidia39714 Actinidia chinensis HOM05D002237 ORTHO05D002213 7.7e-08 62.0 261 34.9
Ca_13160_v3 Cicer arietinum L. HOM05D002237 ORTHO05D002213 7.7e-08 62.0 305 31.1
Gorai.001G022700 Gossypium raimondii HOM05D002237 ORTHO05D002213 7.7e-08 62.0 282 27.0
Lj5g0000472 Lotus japonicus HOM05D002237 ORTHO05D002213 7.7e-08 62.0 58 55.2
MBI04_g31173_MAGBIO Magnolia biondii HOM05D002237 ORTHO05D002213 7.7e-08 62.0 302 27.2
Sabra18G0048700 Salix brachista HOM05D002237 ORTHO05D002213 7.7e-08 62.0 305 26.2
SGA_v2.0_scaffold169G38695 Striga asiatica HOM05D002237 ORTHO05D002213 7.7e-08 62.0 301 23.6
GSVIVG01023189001 Vitis vinifera HOM05D000101 ORTHO05D002559 7.7e-08 62.0 56 55.4
COL.COLO4_21062 Corchorus olitorius HOM05D002237 ORTHO05D002213 1.0e-07 61.6 249 29.7
MBI04_g31169_MAGBIO Magnolia biondii HOM05D002237 ORTHO05D002213 1.0e-07 61.6 302 27.5
MBI04_g31168_MAGBIO Magnolia biondii HOM05D002237 ORTHO05D002213 1.3e-07 61.2 58 60.3
SalBow6G1974 Salvia bowleyana HOM05D002237 ORTHO05D002213 1.3e-07 61.2 59 62.7
TAR636G2243 Trochodendron aralioides HOM05D002237 ORTHO05D002213 1.3e-07 61.2 62 54.8
vmacro00140 Vaccinium macrocarpon HOM05D002237 ORTHO05D002213 1.3e-07 61.2 58 60.3
ClCG05G017870 Citrullus lanatus HOM05D002237 ORTHO05D002213 1.7e-07 60.8 58 58.6
Lalb_Chr22g0356091 Lupinus albus HOM05D002237 ORTHO05D002213 1.7e-07 60.8 305 27.2
Haze_18179 Corylus avellana HOM05D002237 ORTHO05D002213 2.2e-07 60.5 293 32.4
ECA233G4745 Erigeron canadensis HOM05D002237 ORTHO05D002213 2.2e-07 60.5 336 26.5
Hma1.2p1_0798F.1_g219880 Hydrangea macrophylla HOM05D002237 ORTHO05D002213 2.2e-07 60.5 81 44.4
Lj7P270T5 Lonicera japonica HOM05D002237 ORTHO05D002213 2.2e-07 60.5 57 56.1
Solyc08g065150.1 Solanum lycopersicum HOM05D002237 ORTHO05D002213 2.2e-07 60.5 334 25.4
Hma1.2p1_0798F.1_g219850 Hydrangea macrophylla HOM05D002237 ORTHO05D002213 2.9e-07 60.1 271 28.4
MBI01_g16600_MAGBIO Magnolia biondii HOM05D000250 ORTHO05D000625 2.9e-07 60.1 261 34.1
Cpa.g.sc61.39 Carica papaya HOM05D002237 ORTHO05D002213 3.8e-07 59.7 56 60.7
Haze_18186 Corylus avellana HOM05D002237 ORTHO05D002213 3.8e-07 59.7 295 32.2
PGSC0003DMG400035559 Solanum tuberosum HOM05D002237 ORTHO05D002213 3.8e-07 59.7 347 24.8
ATR0749G108 Amborella trichopoda HOM05D002237 ORTHO05D002213 6.5e-07 58.9 265 26.0
CsaV3_4G035640 Cucumis sativus L. HOM05D002237 ORTHO05D002213 6.5e-07 58.9 58 53.4
Eucgr.C00651 Eucalyptus grandis HOM05D002237 ORTHO05D002213 6.5e-07 58.9 326 28.5
Rhsim11G0044000 Rhododendron simsii HOM05D002237 ORTHO05D002213 6.5e-07 58.9 312 31.7
Thecc.09G088400 Theobroma cacao HOM05D002237 ORTHO05D002213 6.5e-07 58.9 56 58.9
Gohir.A07G011600 Gossypium hirsutum HOM05D002237 ORTHO05D002213 1.1e-06 58.2 270 43.3
Cc08_g10640 Coffea canephora HOM05D002237 ORTHO05D002213 1.4e-06 57.8 72 48.6
MELO3C016871.2 Cucumis melo HOM05D002237 ORTHO05D002213 1.4e-06 57.8 58 55.2
Nitab4.5_0003939g0020 Nicotiana tabacum HOM05D002237 ORTHO05D002213 1.9e-06 57.4 55 60.0
Peaxi162Scf01444g00003 Petunia axillaris HOM05D002237 ORTHO05D002213 1.9e-06 57.4 339 35.4
Sabra06G0120500 Salix brachista HOM05D002237 ORTHO05D002213 1.9e-06 57.4 246 33.7
SGA_v2.0_scaffold62G21613 Striga asiatica HOM05D002237 ORTHO05D002213 1.9e-06 57.4 296 31.1
CDE05G2600 Ceratophyllum demersum HOM05D002237 ORTHO05D002213 2.5e-06 57.0 256 35.5
Potri.018G053000 Populus trichocarpa HOM05D002237 ORTHO05D002213 2.5e-06 57.0 311 29.9
HanXRQChr03g0079531 Helianthus annuus HOM05D002237 ORTHO05D002213 3.2e-06 56.6 58 51.7
Nitab4.5_0001367g0050 Nicotiana tabacum HOM05D002237 ORTHO05D002213 3.2e-06 56.6 345 33.3
PGR142G4283 Punica granatum HOM05D002237 ORTHO05D002213 3.2e-06 56.6 339 31.9
QL02p001128 Quercus lobata HOM05D002237 ORTHO05D002213 3.2e-06 56.6 298 29.9
Migut.A00134 Erythranthe guttata HOM05D002237 ORTHO05D002213 4.2e-06 56.2 271 28.4
FAN26G0211 Fragaria x ananassa HOM05D002237 ORTHO05D002213 4.2e-06 56.2 42 66.7
Gohir.D07G011400 Gossypium hirsutum HOM05D002237 ORTHO05D002213 4.2e-06 56.2 259 41.7
Gorai.001G012100 Gossypium raimondii HOM05D002237 ORTHO05D002213 4.2e-06 56.2 259 41.7
Potri.006G228800 Populus trichocarpa HOM05D002237 ORTHO05D002213 4.2e-06 56.2 58 53.4
BolC9t57710H Brassica oleracea HOM05D002237 ORTHO05D002213 5.5e-06 55.8 309 24.9
Carub.0004s0595 Capsella rubella HOM05D002237 ORTHO05D002213 5.5e-06 55.8 295 25.1
FvH4_1g07560 Fragaria vesca HOM05D002237 ORTHO05D002213 5.5e-06 55.8 56 57.1
FAN19G3195 Fragaria x ananassa HOM05D002237 ORTHO05D002213 5.5e-06 55.8 56 57.1
FAN26G2487 Fragaria x ananassa HOM05D002237 ORTHO05D002213 5.5e-06 55.8 56 57.1
Sabra06G0177200 Salix brachista HOM05D002237 ORTHO05D002213 5.5e-06 55.8 58 51.7
AL52U10060 Arabidopsis lyrata HOM05D002237 ORTHO05D002213 7.2e-06 55.5 56 58.9
AL8G32850 Arabidopsis lyrata HOM05D002237 ORTHO05D002213 7.2e-06 55.5 56 58.9
AT5G56980 Arabidopsis thaliana HOM05D002237 ORTHO05D002213 7.2e-06 55.5 56 58.9
BcaC03g14188 Brassica carinata HOM05D002237 ORTHO05D002213 7.2e-06 55.5 56 58.9
A02p08820 Brassica napus HOM05D002237 ORTHO05D002213 7.2e-06 55.5 56 58.9
C02p14710 Brassica napus HOM05D002237 ORTHO05D002213 7.2e-06 55.5 56 58.9
BolC2t07596H Brassica oleracea HOM05D002237 ORTHO05D002213 7.2e-06 55.5 56 58.9
BraA02t05949Z Brassica rapa HOM05D002237 ORTHO05D002213 7.2e-06 55.5 56 58.9
ClCG03G015520 Citrullus lanatus HOM05D002237 ORTHO05D002213 7.2e-06 55.5 277 25.3
Os05g0540900 Oryza sativa ssp. japonica HOM05D002237 ORTHO05D002213 7.2e-06 55.5 40 62.5
Sp6g18690 Schrenkiella parvula HOM05D002237 ORTHO05D002213 7.2e-06 55.5 56 58.9
Carub.0008s1746 Capsella rubella HOM05D002237 ORTHO05D002213 9.4e-06 55.1 56 58.9
Lsat_1_v5_gn_5_47580 Lactuca sativa HOM05D002237 ORTHO05D002213 9.4e-06 55.1 311 28.3


User provided reference genes

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