Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0006562g0010 Nicotiana tabacum HOM05D003263 ORTHO05D004801 0.0e+00 1350.1 674 100.0
Nitab4.5_0011135g0010 Nicotiana tabacum HOM05D003263 ORTHO05D004801 0.0e+00 1309.7 659 98.9
Peaxi162Scf00464g00325 Petunia axillaris HOM05D003263 ORTHO05D004801 0.0e+00 1248.8 661 94.4
Sopen11g006260 Solanum pennellii HOM05D003263 ORTHO05D004801 0.0e+00 1246.1 662 94.0
PGSC0003DMG400013309 Solanum tuberosum HOM05D003263 ORTHO05D004801 0.0e+00 1244.6 662 93.8
Solyc11g011470.2 Solanum lycopersicum HOM05D003263 ORTHO05D004801 0.0e+00 1242.3 664 93.7
CAN.G222.62 Capsicum annuum HOM05D003263 ORTHO05D004801 0.0e+00 1234.9 662 92.7
Actinidia35722 Actinidia chinensis HOM05D003263 ORTHO05D004801 0.0e+00 1175.6 665 87.4
CSS0018871 Camellia sinensis var. sinensis HOM05D003263 ORTHO05D004801 0.0e+00 1171.4 663 87.5
Dinv19049 Davidia involucrata HOM05D003263 ORTHO05D004801 0.0e+00 1169.1 666 86.3
SGA_v2.0_scaffold2G00947 Striga asiatica HOM05D003263 ORTHO05D004801 0.0e+00 1168.7 666 86.8
CiPaw.03G074100 Carya illinoinensis HOM05D003263 ORTHO05D004801 0.0e+00 1160.2 666 85.9
arahy.Tifrunner.gnm1.ann1.AUXW6G Arachis hypogaea HOM05D003263 ORTHO05D004801 0.0e+00 1159.4 662 85.6
Oeu030292.1 Olea europaea HOM05D003263 ORTHO05D004801 0.0e+00 1158.3 698 83.4
TAR629G0765 Trochodendron aralioides HOM05D003263 ORTHO05D004801 0.0e+00 1155.6 667 86.4
Atru.chr1.2038 Acer truncatum HOM05D003263 ORTHO05D004801 0.0e+00 1154.8 664 86.4
Ciclev10019002m.g Citrus clementina HOM05D003263 ORTHO05D004801 0.0e+00 1154.8 667 86.1
Manes.02G078500 Manihot esculenta HOM05D003263 ORTHO05D004801 0.0e+00 1152.5 663 86.6
SalBow5G3125 Salvia bowleyana HOM05D003263 ORTHO05D004801 0.0e+00 1151.0 663 86.4
MSTRG.3699 Avicennia marina HOM05D003263 ORTHO05D004801 0.0e+00 1150.6 662 86.1
Cpa.g.sc116.77 Carica papaya HOM05D003263 ORTHO05D004801 0.0e+00 1150.6 664 85.2
Migut.K00926 Erythranthe guttata HOM05D003263 ORTHO05D004801 0.0e+00 1149.8 661 86.1
Lj6g0025109 Lotus japonicus HOM05D003263 ORTHO05D004801 0.0e+00 1148.3 665 85.0
Rhsim08G0019700 Rhododendron simsii HOM05D003263 ORTHO05D004801 0.0e+00 1146.0 717 80.5
Potri.004G082800 Populus trichocarpa HOM05D003263 ORTHO05D004801 0.0e+00 1144.4 659 84.8
ClCG05G010610 Citrullus lanatus HOM05D003263 ORTHO05D004801 0.0e+00 1144.0 666 85.0
Eucgr.J01621 Eucalyptus grandis HOM05D003263 ORTHO05D004801 0.0e+00 1144.0 665 84.7
Potri.017G136133 Populus trichocarpa HOM05D003263 ORTHO05D004801 0.0e+00 1144.0 661 84.9
VMungo1383G2082 Vigna mungo HOM05D003263 ORTHO05D004801 0.0e+00 1143.6 666 85.1
Glyma.18G041700 Glycine max HOM05D003263 ORTHO05D004801 0.0e+00 1142.9 666 84.4
Ca_17086_v3 Cicer arietinum L. HOM05D003263 ORTHO05D004801 0.0e+00 1142.1 665 85.1
TWI77G0544 Tripterygium wilfordii HOM05D003263 ORTHO05D004801 0.0e+00 1141.3 666 84.2
MSTRG.15657 Avicennia marina HOM05D003263 ORTHO05D004801 0.0e+00 1140.6 663 84.8
Glyma.11G214800 Glycine max HOM05D003263 ORTHO05D004801 0.0e+00 1140.6 666 84.7
TWI74G0116 Tripterygium wilfordii HOM05D003263 ORTHO05D004801 0.0e+00 1140.2 666 84.2
CsaV3_3G017880 Cucumis sativus L. HOM05D003263 ORTHO05D004801 0.0e+00 1138.6 668 84.3
HanXRQChr07g0191741 Helianthus annuus HOM05D003263 ORTHO05D004801 0.0e+00 1138.6 663 84.9
TPR.G23206 Trifolium pratense HOM05D003263 ORTHO05D004801 0.0e+00 1138.6 665 84.2
ECA238G3173 Erigeron canadensis HOM05D003263 ORTHO05D004801 0.0e+00 1137.1 664 84.5
Phvul.001G229000 Phaseolus vulgaris HOM05D003263 ORTHO05D004801 0.0e+00 1137.1 666 84.7
Aqoxy3G04075 Aquilegia oxysepala HOM05D003263 ORTHO05D004801 0.0e+00 1136.3 679 83.8
Haze_14285 Corylus avellana HOM05D003263 ORTHO05D004801 0.0e+00 1135.9 662 85.0
MELO3C020331.2 Cucumis melo HOM05D003263 ORTHO05D004801 0.0e+00 1135.9 668 84.0
Prupe.3G165400 Prunus persica HOM05D003263 ORTHO05D004801 0.0e+00 1135.9 667 84.7
MD09G1268900 Malus domestica HOM05D003263 ORTHO05D004801 0.0e+00 1135.2 668 84.3
HanXRQChr14g0444641 Helianthus annuus HOM05D003263 ORTHO05D004801 0.0e+00 1133.2 662 84.4
MD17G1267300 Malus domestica HOM05D003263 ORTHO05D004801 0.0e+00 1133.2 668 83.5
Cfa007786 Carpinus fangiana HOM05D003263 ORTHO05D004801 0.0e+00 1132.5 663 84.8
PSO017G4553 Papaver somniferum HOM05D003263 ORTHO05D004801 0.0e+00 1132.1 674 83.1
Sed0005557 Sechium edule HOM05D003263 ORTHO05D004801 0.0e+00 1131.7 664 84.0
CANSAT56G4352 Cannabis sativa HOM05D003263 ORTHO05D004801 0.0e+00 1130.9 666 84.1
Psat5g119880 Pisum sativum HOM05D003263 ORTHO05D004801 0.0e+00 1130.2 667 83.4
DCAR_014159 Daucus carota HOM05D003263 ORTHO05D004801 0.0e+00 1129.8 662 83.8
Sed0016313 Sechium edule HOM05D003263 ORTHO05D004801 0.0e+00 1129.0 664 84.3
Gohir.D07G183900 Gossypium hirsutum HOM05D003263 ORTHO05D004801 0.0e+00 1128.6 663 84.5
PSO478G1645 Papaver somniferum HOM05D003263 ORTHO05D004801 0.0e+00 1127.5 675 82.8
Gorai.001G204300 Gossypium raimondii HOM05D003263 ORTHO05D004801 0.0e+00 1127.1 664 84.3
COL.COLO4_13315 Corchorus olitorius HOM05D003263 ORTHO05D004801 0.0e+00 1126.7 662 84.6
PGR042G3530 Punica granatum HOM05D003263 ORTHO05D004801 0.0e+00 1126.3 673 82.3
Duzib138G0925 Durio zibethinus HOM05D003263 ORTHO05D004801 0.0e+00 1125.5 663 84.0
Gorai.001G197100 Gossypium raimondii HOM05D003263 ORTHO05D004801 0.0e+00 1125.5 664 83.3
RcHm_v2.0_Chr3g0491991 Rosa chinensis HOM05D003263 ORTHO05D004801 0.0e+00 1124.8 663 83.9
unitig_748.g8633 Utricularia gibba HOM05D003263 ORTHO05D004801 0.0e+00 1124.4 668 83.7
QL02p059434 Quercus lobata HOM05D003263 ORTHO05D004801 0.0e+00 1124.0 664 83.0
FAN23G0774 Fragaria x ananassa HOM05D003263 ORTHO05D004801 0.0e+00 1122.8 661 83.8
EL10Ac2g03207 Beta vulgaris HOM05D003263 ORTHO05D004801 0.0e+00 1121.3 667 83.1
Duzib133G1400 Durio zibethinus HOM05D003263 ORTHO05D004801 0.0e+00 1120.9 664 84.0
Migut.H02232 Erythranthe guttata HOM05D003263 ORTHO05D004801 0.0e+00 1120.5 663 84.2
FAN26G0816 Fragaria x ananassa HOM05D003263 ORTHO05D004801 0.0e+00 1119.4 661 83.4
Lalb_Chr18g0053541 Lupinus albus HOM05D003263 ORTHO05D004801 0.0e+00 1119.0 665 82.7
Gohir.A07G176600 Gossypium hirsutum HOM05D003263 ORTHO05D004801 0.0e+00 1118.6 664 83.6
THA.LOC104805635 Tarenaya hassleriana HOM05D003263 ORTHO05D004801 0.0e+00 1117.4 664 83.1
AUR62037782 Chenopodium quinoa HOM05D003263 ORTHO05D004801 0.0e+00 1115.1 667 82.6
Medtr3g065130 Medicago truncatula HOM05D003263 ORTHO05D004801 0.0e+00 1114.8 665 82.9
Thecc.04G063600 Theobroma cacao HOM05D003263 ORTHO05D004801 0.0e+00 1114.8 663 84.0
FvH4_1g30070 Fragaria vesca HOM05D003263 ORTHO05D004801 0.0e+00 1114.4 660 83.9
Lsat_1_v5_gn_3_63961 Lactuca sativa HOM05D003263 ORTHO05D004801 0.0e+00 1113.6 663 82.4
Ah.10g032470 Amaranthus hybridus HOM05D003263 ORTHO05D004801 0.0e+00 1112.8 662 82.5
Hund13092 Selenicereus undatus HOM05D003263 ORTHO05D004801 0.0e+00 1108.2 615 86.7
FAN19G0316 Fragaria x ananassa HOM05D003263 ORTHO05D004801 0.0e+00 1105.5 632 85.3
THA.LOC104822242 Tarenaya hassleriana HOM05D003263 ORTHO05D004801 0.0e+00 1105.5 664 81.6
BcaB06g27086 Brassica carinata HOM05D003263 ORTHO05D004801 0.0e+00 1105.1 665 81.7
C04p44380 Brassica napus HOM05D003263 ORTHO05D004801 0.0e+00 1104.4 665 81.8
BraA04t16733Z Brassica rapa HOM05D003263 ORTHO05D004801 0.0e+00 1104.4 665 81.7
Sc14g0006900 Simmondsia chinensis HOM05D003263 ORTHO05D004801 0.0e+00 1103.6 663 81.9
A04p10660 Brassica napus HOM05D003263 ORTHO05D004801 0.0e+00 1102.4 665 81.5
arahy.Tifrunner.gnm1.ann1.ZZ0CH2 Arachis hypogaea HOM05D003263 ORTHO05D004801 0.0e+00 1101.7 759 74.2
Manes.01G120700 Manihot esculenta HOM05D003263 ORTHO05D004801 0.0e+00 1101.7 662 83.4
Thhalv10027640m.g Eutrema salsugineum HOM05D003263 ORTHO05D004801 0.0e+00 1101.3 665 81.7
Ah.10g032480 Amaranthus hybridus HOM05D003263 ORTHO05D004801 0.0e+00 1100.1 662 81.6
BcaC02g09578 Brassica carinata HOM05D003263 ORTHO05D004801 0.0e+00 1099.0 665 81.4
BolC4t26009H Brassica oleracea HOM05D003263 ORTHO05D004801 0.0e+00 1099.0 665 81.4
Aa31LG9G17530 Aethionema arabicum HOM05D003263 ORTHO05D004801 0.0e+00 1098.2 664 81.5
Zm00001eb216210 Zea mays HOM05D003263 ORTHO05D004801 0.0e+00 1097.4 658 82.4
CARHR215400 Cardamine hirsuta HOM05D003263 ORTHO05D004801 0.0e+00 1096.6 664 80.7
AL1G43210 Arabidopsis lyrata HOM05D003263 ORTHO05D004801 0.0e+00 1094.0 663 80.8
Zm00001eb055050 Zea mays HOM05D003263 ORTHO05D004801 0.0e+00 1094.0 641 83.5
AT5G37510 Arabidopsis thaliana HOM05D003263 ORTHO05D004801 0.0e+00 1093.6 664 80.6
Os03g0713400 Oryza sativa ssp. japonica HOM05D003263 ORTHO05D004801 0.0e+00 1090.5 641 83.2
Aa31LG9G17520 Aethionema arabicum HOM05D003263 ORTHO05D004801 0.0e+00 1088.6 670 80.4
Carub.0007s3268 Capsella rubella HOM05D003263 ORTHO05D004801 0.0e+00 1088.2 664 80.0
SGA_v2.0_scaffold108G30966 Striga asiatica HOM05D003263 ORTHO05D004801 4.6e-312 1073.9 666 80.2
AL7G46270 Arabidopsis lyrata HOM05D003263 ORTHO05D004801 3.2e-311 1071.2 697 76.5
HPP92_020298 Vanilla planifolia HOM05D003263 ORTHO05D004801 5.5e-311 1070.5 657 79.8
Cc07_g13220 Coffea canephora HOM05D003263 ORTHO05D004801 1.1e-308 1062.8 576 89.1
Lalb_Chr15g0085021 Lupinus albus HOM05D003263 ORTHO05D004801 4.3e-308 1060.8 663 79.6
Nn4g24447 Nelumbo nucifera HOM05D003263 ORTHO05D004801 9.5e-308 1059.7 623 84.9
AUR62042225 Chenopodium quinoa HOM05D003263 ORTHO05D004801 4.0e-306 1054.3 667 79.3
CDE05G1320 Ceratophyllum demersum HOM05D003263 ORTHO05D004801 6.8e-306 1053.5 654 79.5
SHI30113 Sapria himalayana HOM05D003263 ORTHO05D004801 3.9e-301 1037.7 661 77.9
Gohir.D07G176300 Gossypium hirsutum HOM05D003263 ORTHO05D004801 1.6e-299 1032.3 576 86.6
Gohir.A07G170100 Gossypium hirsutum HOM05D003263 ORTHO05D004801 2.8e-299 1031.6 576 86.6
ATR0118G003 Amborella trichopoda HOM05D003263 ORTHO05D004801 3.1e-298 1028.1 689 74.6
vmacro18524 Vaccinium macrocarpon HOM05D003263 ORTHO05D004801 2.0e-297 1025.4 664 78.3
GSVIVG01030914001 Vitis vinifera HOM05D003263 ORTHO05D004801 1.3e-288 996.1 576 84.9
MBI19_g09384_MAGBIO Magnolia biondii HOM05D003263 ORTHO05D004801 3.2e-287 991.5 975 56.7
CDE05G1041 Ceratophyllum demersum HOM05D003263 ORTHO05D004801 5.4e-287 990.7 654 75.2
Dinv28178 Davidia involucrata HOM05D003263 ORTHO05D004801 4.0e-274 948.0 666 73.9
Pp3c1_34100 Physcomitrium patens HOM05D003263 ORTHO05D004801 8.7e-261 903.7 593 72.8
Pp3c1_34110 Physcomitrium patens HOM05D003263 ORTHO05D004801 8.7e-261 903.7 593 72.8
Pp3c1_34140 Physcomitrium patens HOM05D003263 ORTHO05D004801 4.3e-260 901.4 593 72.7
Pp3c19_19270 Physcomitrium patens HOM05D003263 ORTHO05D004801 3.7e-259 898.3 593 72.5
SMO331G0029 Selaginella moellendorffii HOM05D003263 ORTHO05D004801 2.6e-257 892.1 597 70.5
AagrBONN_evm.TU.Sc2ySwM_228.2430 Anthoceros agrestis HOM05D003263 ORTHO05D004801 2.1e-254 882.5 597 70.7
Mapoly0153s0030 Marchantia polymorpha HOM05D003263 ORTHO05D004801 5.1e-253 877.9 599 70.3
arahy.Tifrunner.gnm1.ann1.5H82NF Arachis hypogaea HOM05D003263 ORTHO05D004801 6.5e-248 860.9 576 75.3
arahy.Tifrunner.gnm1.ann1.RIP12T Arachis hypogaea HOM05D003263 ORTHO05D004801 3.3e-244 848.6 576 74.8
CBR_g6354 Chara braunii HOM05D003263 ORTHO05D004801 3.2e-231 805.4 595 64.5
Cre12.g535950 Chlamydomonas reinhardtii HOM05D003263 ORTHO05D004801 5.3e-218 761.5 597 61.8
MCO08G340 Micromonas commoda HOM05D003263 ORTHO05D004801 5.2e-205 718.4 610 59.5
TAR371G0371 Trochodendron aralioides HOM05D003263 ORTHO05D004801 5.2e-205 718.4 672 60.3
PRCOL_00000346 Prasinoderma coloniale HOM05D003263 ORTHO05D004801 9.5e-199 697.6 599 60.1
Cfa025667 Carpinus fangiana HOM05D003263 ORTHO05D004801 7.0e-186 654.8 591 55.2
Haze_26802 Corylus avellana HOM05D003263 ORTHO05D004801 5.4e-162 575.5 616 49.2
Oeu062704.1 Olea europaea HOM05D003263 ORTHO05D004801 5.1e-160 568.9 319 90.3
SpUN1596_0010 Schrenkiella parvula HOM05D003263 ORTHO05D004801 3.4e-156 556.2 305 86.6
arahy.Tifrunner.gnm1.ann1.HY7M04 Arachis hypogaea HOM05D000164 ORTHO05D004801 9.3e-154 548.1 344 77.3
Thecc.K0008100 Theobroma cacao HOM05D003263 ORTHO05D004801 8.2e-142 508.4 298 85.9
arahy.Tifrunner.gnm1.ann1.Z93KCA Arachis hypogaea HOM05D003263 ORTHO05D004801 4.5e-132 476.1 301 79.4
Potri.017G136950 Populus trichocarpa HOM05D003263 ORTHO05D004801 1.7e-107 394.4 237 81.0
Oeu062706.1 Olea europaea HOM05D003263 ORTHO05D004801 5.0e-99 366.3 230 76.5
Sabra17G0054900 Salix brachista HOM05D003263 ORTHO05D004801 2.7e-97 360.5 241 74.3
Thecc.K0008200 Theobroma cacao HOM05D003263 ORTHO05D004801 1.2e-92 345.1 219 79.0
Eucgr.J01637 Eucalyptus grandis HOM05D003263 ORTHO05D004801 8.0e-89 332.4 221 77.4
SpUn1854_0010 Schrenkiella parvula HOM05D003263 ORTHO05D004801 3.4e-87 327.0 212 74.1
Oeu039332.1 Olea europaea HOM05D003263 ORTHO05D004801 3.6e-73 280.4 172 76.2
Actinidia28797 Actinidia chinensis HOM05D003263 ORTHO05D004801 5.1e-67 260.0 391 45.8
arahy.Tifrunner.gnm1.ann1.VKQW11 Arachis hypogaea HOM05D003263 ORTHO05D004801 2.5e-66 257.7 126 96.0
CSS0049015 Camellia sinensis var. sinensis HOM05D003263 ORTHO05D004801 1.5e-63 248.4 216 64.8
SEGI_21193 Sequoiadendron giganteum HOM05D003263 ORTHO05D004801 5.8e-63 246.5 150 79.3
CSS0039899 Camellia sinensis var. sinensis HOM05D003263 ORTHO05D004801 3.2e-61 240.7 215 62.3
arahy.Tifrunner.gnm1.ann1.SN393R Arachis hypogaea HOM05D003263 ORTHO05D004801 3.0e-59 234.2 114 95.6
MD16G1264300 Malus domestica HOM05D003263 ORTHO05D004801 3.9e-59 233.8 260 52.3
Haze_27240 Corylus avellana HOM05D003263 ORTHO05D004801 7.6e-55 219.5 288 42.4
HanXRQChr17g0559491 Helianthus annuus HOM05D003263 ORTHO05D004801 5.1e-51 206.8 138 78.3
SEGI_05320 Sequoiadendron giganteum HOM05D003263 ORTHO05D004801 2.4e-45 188.0 117 77.8
SEGI_04560 Sequoiadendron giganteum HOM05D003263 ORTHO05D004801 3.3e-42 177.6 154 61.0
Sabra17G0112400 Salix brachista HOM05D003263 ORTHO05D003497 3.8e-38 164.1 122 69.7
QL04p097132 Quercus lobata HOM05D003263 ORTHO05D000041 1.3e-35 155.6 91 82.4
Migut.M00197 Erythranthe guttata HOM05D003263 ORTHO05D004801 2.9e-30 137.9 113 68.1
Ca_19082_v3 Cicer arietinum L. HOM05D003263 ORTHO05D004801 3.8e-30 137.5 83 80.7
Cc04_g05630 Coffea canephora HOM05D003263 ORTHO05D004801 9.3e-29 132.9 136 57.4
Hund13091 Selenicereus undatus HOM05D003263 ORTHO05D004801 1.8e-27 128.6 105 61.0
VMungo0647G1524 Vigna mungo HOM05D003263 ORTHO05D004801 3.9e-27 127.5 73 75.3
MD16G1264400 Malus domestica HOM05D003263 ORTHO05D004801 4.3e-26 124.0 61 93.4
Hma1.2p1_1425F.1_g282850 Hydrangea macrophylla HOM05D003263 ORTHO05D004801 2.6e-23 114.8 99 61.6
CBR_g26339 Chara braunii HOM05D004987 ORTHO05D005960 4.5e-23 114.0 220 30.9
CSS0022568 Camellia sinensis var. sinensis HOM05D003263 ORTHO05D004801 5.8e-23 113.6 136 53.7
QL08p053439 Quercus lobata HOM05D003263 ORTHO05D004801 1.5e-15 89.0 50 80.0
CBR_g44347 Chara braunii HOM05D003263 ORTHO05D004801 3.4e-15 87.8 58 69.0
TPR.G18971 Trifolium pratense HOM05D003263 ORTHO05D004801 6.5e-14 83.6 56 73.2
SEGI_40032 Sequoiadendron giganteum HOM05D003263 ORTHO05D024792 1.0e-11 76.3 42 85.7
TPR.G11234 Trifolium pratense HOM05D003263 ORTHO05D004801 3.0e-11 74.7 42 85.7
Cc00_g06720 Coffea canephora HOM05D003263 ORTHO05D004801 2.0e-10 72.0 38 89.5


User provided reference genes

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