Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0006524g0010 Nicotiana tabacum HOM05D002873 ORTHO05D002978 8.3e-29 129.8 71 100.0
Migut.H00555 Erythranthe guttata HOM05D002873 ORTHO05D002978 9.9e-14 79.7 71 63.4
Cfa020560 Carpinus fangiana HOM05D002873 ORTHO05D002978 2.4e-12 75.1 69 65.2
Haze_17643 Corylus avellana HOM05D002873 ORTHO05D002978 4.1e-12 74.3 69 65.2
Prupe.3G244200 Prunus persica HOM05D002873 ORTHO05D002978 2.1e-11 72.0 70 61.4
Prupe.3G244300 Prunus persica HOM05D002873 ORTHO05D002978 2.1e-11 72.0 70 61.4
Lalb_Chr04g0258251 Lupinus albus HOM05D002873 ORTHO05D002978 2.7e-11 71.6 70 60.0
Prupe.3G244600 Prunus persica HOM05D002873 ORTHO05D002978 3.5e-11 71.2 70 61.4
Prupe.3G244100 Prunus persica HOM05D002873 ORTHO05D002978 4.6e-11 70.9 70 60.0
THA.LOC109117084 Tarenaya hassleriana HOM05D002873 ORTHO05D002978 4.6e-11 70.9 70 61.4
BcaC09g47705 Brassica carinata HOM05D002873 ORTHO05D002978 6.0e-11 70.5 69 60.9
BNapus_Darmor_BZH_scaffold_208p00010 Brassica napus HOM05D002873 ORTHO05D002978 6.0e-11 70.5 69 60.9
BolC1t05901H Brassica oleracea HOM05D002873 ORTHO05D002978 6.0e-11 70.5 69 60.9
BraSC141t45633Z Brassica rapa HOM05D002873 ORTHO05D002978 6.0e-11 70.5 69 60.9
Prupe.3G244500 Prunus persica HOM05D002873 ORTHO05D002978 6.0e-11 70.5 70 60.0
TWI34G1371 Tripterygium wilfordii HOM05D002873 ORTHO05D002978 6.0e-11 70.5 70 58.6
BNapus_Darmor_BZH_scaffold_122p00010 Brassica napus HOM05D002873 ORTHO05D002978 1.7e-10 68.9 69 59.4
BNapus_Darmor_BZH_scaffold_99p00020 Brassica napus HOM05D002873 ORTHO05D002978 1.7e-10 68.9 69 59.4
BolC1t05900H Brassica oleracea HOM05D002873 ORTHO05D002978 1.7e-10 68.9 69 59.4
Prupe.3G244400 Prunus persica HOM05D002873 ORTHO05D002978 1.7e-10 68.9 70 58.6
Ca_06717_v3 Cicer arietinum L. HOM05D002873 ORTHO05D002978 2.3e-10 68.6 70 57.1
Dinv38615 Davidia involucrata HOM05D002873 ORTHO05D002978 2.3e-10 68.6 69 59.4
RcHm_v2.0_Chr2g0163991 Rosa chinensis HOM05D002873 ORTHO05D002978 2.3e-10 68.6 70 60.0
Nitab4.5_0000612g0030 Nicotiana tabacum HOM05D002873 ORTHO05D002978 3.0e-10 68.2 71 64.8
Carub.0003s0158 Capsella rubella HOM05D002873 ORTHO05D002978 5.1e-10 67.4 69 58.0
Sed0011149 Sechium edule HOM05D002873 ORTHO05D002978 5.1e-10 67.4 70 58.6
Peaxi162Scf00479g00427 Petunia axillaris HOM05D002873 ORTHO05D002978 6.6e-10 67.0 69 62.3
Sopen02g034300 Solanum pennellii HOM05D002873 ORTHO05D002978 6.6e-10 67.0 70 57.1
Haze_14075 Corylus avellana HOM05D002873 ORTHO05D002978 8.6e-10 66.6 70 58.6
Sed0008680 Sechium edule HOM05D002873 ORTHO05D002978 1.1e-09 66.2 70 58.6
A02p10830 Brassica napus HOM05D002873 ORTHO05D002978 1.5e-09 65.9 70 54.3
BraA02t06145Z Brassica rapa HOM05D002873 ORTHO05D002978 1.5e-09 65.9 70 54.3
CsaV3_5G004620 Cucumis sativus L. HOM05D002873 ORTHO05D002978 1.5e-09 65.9 70 60.0
Dinv33894 Davidia involucrata HOM05D002873 ORTHO05D002978 1.5e-09 65.9 69 56.5
arahy.Tifrunner.gnm1.ann1.4T36CH Arachis hypogaea HOM05D002873 ORTHO05D002978 1.9e-09 65.5 71 54.9
arahy.Tifrunner.gnm1.ann1.JTM1YJ Arachis hypogaea HOM05D002873 ORTHO05D002978 1.9e-09 65.5 71 54.9
AL3G11800 Arabidopsis lyrata HOM05D002873 ORTHO05D002978 2.5e-09 65.1 69 56.5
AT3G02480 Arabidopsis thaliana HOM05D002873 ORTHO05D002978 3.3e-09 64.7 69 56.5
BcaC03g14385 Brassica carinata HOM05D002873 ORTHO05D002978 4.3e-09 64.3 70 52.9
C02p17950 Brassica napus HOM05D002873 ORTHO05D002978 4.3e-09 64.3 70 52.9
BolC2t07926H Brassica oleracea HOM05D002873 ORTHO05D002978 4.3e-09 64.3 70 52.9
CsaV3_5G004610 Cucumis sativus L. HOM05D002873 ORTHO05D002978 4.3e-09 64.3 70 58.6
Dinv36852 Davidia involucrata HOM05D002873 ORTHO05D002978 7.3e-09 63.5 68 55.9
GSVIVG01036492001 Vitis vinifera HOM05D002873 ORTHO05D002978 7.3e-09 63.5 69 55.1
Cpa.g.sc188.26 Carica papaya HOM05D002873 ORTHO05D002978 9.5e-09 63.2 68 57.4
Lsat_1_v5_gn_2_86260 Lactuca sativa HOM05D002873 ORTHO05D002978 9.5e-09 63.2 69 55.1
Prupe.3G244700 Prunus persica HOM05D002873 ORTHO05D002978 9.5e-09 63.2 69 55.1
FAN02G0494 Fragaria x ananassa HOM05D002873 ORTHO05D002978 1.2e-08 62.8 69 56.5
Phvul.004G047300 Phaseolus vulgaris HOM05D002873 ORTHO05D002978 3.6e-08 61.2 69 52.2
Aa31LG5G10000 Aethionema arabicum HOM05D002873 ORTHO05D002978 8.1e-08 60.1 69 52.2
Dinv34873 Davidia involucrata HOM05D002873 ORTHO05D002978 8.1e-08 60.1 65 58.5
Eucgr.J01446 Eucalyptus grandis HOM05D002873 ORTHO05D002978 8.1e-08 60.1 120 39.2
MD09G1079600 Malus domestica HOM05D002873 ORTHO05D002978 1.4e-07 59.3 70 54.3
MELO3C022078.2 Cucumis melo HOM05D002873 ORTHO05D002978 1.8e-07 58.9 69 56.5
THA.LOC109116088 Tarenaya hassleriana HOM05D002873 ORTHO05D002978 2.4e-07 58.5 70 54.3
HanXRQChr14g0448071 Helianthus annuus HOM05D002873 ORTHO05D002978 3.1e-07 58.2 71 47.9
Sc11g0008050 Simmondsia chinensis HOM05D002873 ORTHO05D002978 3.1e-07 58.2 70 52.9
Nitab4.5_0006224g0060 Nicotiana tabacum HOM05D002873 ORTHO05D002978 4.0e-07 57.8 66 56.1
Sed0026183 Sechium edule HOM05D002873 ORTHO05D002978 4.0e-07 57.8 70 52.9
Hund13793 Selenicereus undatus HOM05D002873 ORTHO05D002978 4.0e-07 57.8 68 55.9
CsaV3_5G038880 Cucumis sativus L. HOM05D002873 ORTHO05D002978 5.2e-07 57.4 69 52.2
Dinv33895 Davidia involucrata HOM05D002873 ORTHO05D002978 5.2e-07 57.4 69 52.2
Medtr7g019290 Medicago truncatula HOM05D002873 ORTHO05D002978 5.2e-07 57.4 69 56.5
Peaxi162Scf00479g00055 Petunia axillaris HOM05D002873 ORTHO05D002978 5.2e-07 57.4 69 52.2
GSVIVG01036482001 Vitis vinifera HOM05D002873 ORTHO05D002978 6.8e-07 57.0 71 50.7
BcaC01g04444 Brassica carinata HOM05D002873 ORTHO05D002978 8.9e-07 56.6 69 52.2
C03p40070 Brassica napus HOM05D002873 ORTHO05D002978 8.9e-07 56.6 69 52.2
BolC3t16273H Brassica oleracea HOM05D002873 ORTHO05D002978 8.9e-07 56.6 69 52.2
CARHR288730 Cardamine hirsuta HOM05D002873 ORTHO05D002978 8.9e-07 56.6 65 53.8
A03p32950 Brassica napus HOM05D002873 ORTHO05D002978 1.5e-06 55.8 69 52.2
BraA03t12463Z Brassica rapa HOM05D002873 ORTHO05D002978 1.5e-06 55.8 69 52.2
Medtr7g020780 Medicago truncatula HOM05D002873 ORTHO05D002978 1.5e-06 55.8 69 55.1
Potri.004G106350 Populus trichocarpa HOM05D002873 ORTHO05D002978 1.5e-06 55.8 71 50.7
RcHm_v2.0_Chr2g0164011 Rosa chinensis HOM05D002873 ORTHO05D002978 1.5e-06 55.8 70 52.9
Aqoxy6G02621 Aquilegia oxysepala HOM05D002873 ORTHO05D002978 2.6e-06 55.1 69 50.7
FAN05G4367 Fragaria x ananassa HOM05D002873 ORTHO05D002978 4.4e-06 54.3 70 51.4
Actinidia26314 Actinidia chinensis HOM05D002873 ORTHO05D002978 5.8e-06 53.9 69 50.7
Sabra04G0075800 Salix brachista HOM05D002873 ORTHO05D002978 5.8e-06 53.9 93 43.0
Sopen03g009840 Solanum pennellii HOM05D002873 ORTHO05D002978 5.8e-06 53.9 69 55.1
Duzib133G0796 Durio zibethinus HOM05D020367 ORTHO05D002978 7.6e-06 53.5 69 52.2
Duzib133G0848 Durio zibethinus HOM05D020367 ORTHO05D002978 7.6e-06 53.5 69 52.2
Solyc03g046320.4 Solanum lycopersicum HOM05D002873 ORTHO05D002978 7.6e-06 53.5 69 55.1
MELO3C005500.2 Cucumis melo HOM05D002873 ORTHO05D002978 9.9e-06 53.1 70 51.4
Sc11g0008060 Simmondsia chinensis HOM05D002873 ORTHO05D002978 9.9e-06 53.1 69 52.2


User provided reference genes

Program Settings