Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0006520g0020 Nicotiana tabacum HOM05D000203 ORTHO05D000135 1.9e-37 158.7 80 100.0
Nitab4.5_0002207g0020 Nicotiana tabacum HOM05D000203 ORTHO05D000135 3.1e-16 88.2 102 51.0
PGSC0003DMG400042442 Solanum tuberosum HOM05D000203 ORTHO05D000135 1.5e-13 79.3 118 44.1
Nitab4.5_0000622g0100 Nicotiana tabacum HOM05D000203 ORTHO05D000135 7.2e-13 77.0 119 40.3
CAN.G377.22 Capsicum annuum HOM05D000203 ORTHO05D000135 9.4e-13 76.6 117 40.2
CAN.G478.14 Capsicum annuum HOM05D000203 ORTHO05D000135 3.6e-12 74.7 117 38.5
Nitab4.5_0002860g0020 Nicotiana tabacum HOM05D000203 ORTHO05D000135 8.0e-12 73.6 115 40.9
Nitab4.5_0010230g0020 Nicotiana tabacum HOM05D000203 ORTHO05D000135 8.0e-12 73.6 49 73.5
Peaxi162Scf00104g01011 Petunia axillaris HOM05D000203 ORTHO05D000135 1.0e-11 73.2 49 73.5
Nitab4.5_0000622g0180 Nicotiana tabacum HOM05D000203 ORTHO05D000135 1.4e-11 72.8 119 39.5
CAN.G478.9 Capsicum annuum HOM05D000203 ORTHO05D000135 1.8e-11 72.4 49 73.5
Peaxi162Scf00104g00193 Petunia axillaris HOM05D000203 ORTHO05D000135 1.8e-11 72.4 49 73.5
Nitab4.5_0000592g0440 Nicotiana tabacum HOM05D000203 ORTHO05D000135 3.0e-11 71.6 115 40.0
CAN.G713.15 Capsicum annuum HOM05D000203 ORTHO05D000135 6.7e-11 70.5 116 37.9
Nitab4.5_0009635g0020 Nicotiana tabacum HOM05D000203 ORTHO05D000135 2.0e-10 68.9 119 37.0
Sopen04g025630 Solanum pennellii HOM05D000203 ORTHO05D000135 2.0e-10 68.9 49 71.4
PGSC0003DMG400037384 Solanum tuberosum HOM05D000203 ORTHO05D015565 2.0e-10 68.9 119 38.7
PGSC0003DMG400040848 Solanum tuberosum HOM05D000203 ORTHO05D000135 2.0e-10 68.9 115 37.4
Solyc01g097850.1 Solanum lycopersicum HOM05D000203 ORTHO05D000135 2.6e-10 68.6 49 71.4
PGSC0003DMG400040999 Solanum tuberosum HOM05D000203 ORTHO05D000135 2.6e-10 68.6 49 69.4
PGSC0003DMG400044761 Solanum tuberosum HOM05D000203 ORTHO05D000135 2.6e-10 68.6 115 39.1
Nitab4.5_0002210g0020 Nicotiana tabacum HOM05D000203 ORTHO05D000135 3.3e-10 68.2 100 43.0
PGSC0003DMG400044457 Solanum tuberosum HOM05D000203 ORTHO05D000135 3.3e-10 68.2 49 69.4
CAN.G1843.5 Capsicum annuum HOM05D000203 ORTHO05D000135 4.4e-10 67.8 106 39.6
CAN.G866.37 Capsicum annuum HOM05D000203 ORTHO05D000135 4.4e-10 67.8 116 37.1
Peaxi162Scf01553g00012 Petunia axillaris HOM05D000203 ORTHO05D000135 4.4e-10 67.8 104 39.4
PGSC0003DMG400043614 Solanum tuberosum HOM05D000203 ORTHO05D000135 4.4e-10 67.8 82 48.8
CAN.G2092.1 Capsicum annuum HOM05D000203 ORTHO05D000135 7.5e-10 67.0 49 69.4
CAN.G478.11 Capsicum annuum HOM05D000203 ORTHO05D000135 7.5e-10 67.0 49 67.3
Peaxi162Scf00047g02018 Petunia axillaris HOM05D000203 ORTHO05D000135 9.7e-10 66.6 116 36.2
CAN.G866.34 Capsicum annuum HOM05D000203 ORTHO05D000135 1.3e-09 66.2 109 38.5
PGSC0003DMG400042688 Solanum tuberosum HOM05D000203 ORTHO05D000135 1.3e-09 66.2 49 69.4
Nitab4.5_0000586g0030 Nicotiana tabacum HOM05D000203 ORTHO05D000135 1.7e-09 65.9 65 52.3
Solyc04g056740.1 Solanum lycopersicum HOM05D000203 ORTHO05D000135 1.7e-09 65.9 49 69.4
Sopen10g007120 Solanum pennellii HOM05D000203 ORTHO05D000135 1.7e-09 65.9 49 67.3
Sopen10g007160 Solanum pennellii HOM05D002655 ORTHO05D002558 2.2e-09 65.5 49 69.4
Nitab4.5_0002207g0010 Nicotiana tabacum HOM05D000203 ORTHO05D000135 2.8e-09 65.1 87 44.8
Solyc10g018070.1 Solanum lycopersicum HOM05D000203 ORTHO05D000135 2.8e-09 65.1 49 69.4
CAN.G638.39 Capsicum annuum HOM05D000203 ORTHO05D000135 4.8e-09 64.3 49 69.4
Peaxi162Scf00920g00027 Petunia axillaris HOM05D000203 ORTHO05D000135 4.8e-09 64.3 49 61.2
QL05p059069 Quercus lobata HOM05D000203 ORTHO05D000135 4.8e-09 64.3 49 65.3
Solyc04g056550.1 Solanum lycopersicum HOM05D000203 ORTHO05D000135 6.3e-09 63.9 49 65.3
PGSC0003DMG400045528 Solanum tuberosum HOM05D000203 ORTHO05D000135 6.3e-09 63.9 49 61.2
Peaxi162Scf00118g01710 Petunia axillaris HOM05D000203 ORTHO05D000135 8.2e-09 63.5 102 38.2
Cc09_g04710 Coffea canephora HOM05D000203 ORTHO05D000135 1.1e-08 63.2 49 63.3
Sopen01g026420 Solanum pennellii HOM05D000203 ORTHO05D000135 1.4e-08 62.8 49 65.3
Solyc10g018110.1 Solanum lycopersicum HOM05D000203 ORTHO05D000135 1.8e-08 62.4 47 70.2
Solyc06g059780.1 Solanum lycopersicum HOM05D000203 ORTHO05D000135 2.4e-08 62.0 49 65.3
PGSC0003DMG400039537 Solanum tuberosum HOM05D000203 ORTHO05D000135 2.4e-08 62.0 49 61.2
CAN.G713.23 Capsicum annuum HOM05D000203 ORTHO05D000135 3.1e-08 61.6 116 33.6
CAN.G866.36 Capsicum annuum HOM05D000203 ORTHO05D000135 3.1e-08 61.6 112 36.6
Sabra04G0086800 Salix brachista HOM05D000203 ORTHO05D000135 3.1e-08 61.6 50 60.0
Potri.004G130900 Populus trichocarpa HOM05D000203 ORTHO05D000135 4.1e-08 61.2 50 60.0
Thecc.06G153600 Theobroma cacao HOM05D000203 ORTHO05D000135 4.1e-08 61.2 48 64.6
Nitab4.5_0000592g0400 Nicotiana tabacum HOM05D000203 ORTHO05D000135 5.3e-08 60.8 49 57.1
Duzib192G0595 Durio zibethinus HOM05D000203 ORTHO05D000135 7.0e-08 60.5 48 62.5
CAN.G713.14 Capsicum annuum HOM05D000203 ORTHO05D000135 1.2e-07 59.7 47 63.8
Cfa000970 Carpinus fangiana HOM05D000203 ORTHO05D000135 1.2e-07 59.7 50 60.0
Solyc06g054680.2 Solanum lycopersicum HOM05D000203 ORTHO05D000135 1.2e-07 59.7 49 61.2
CiPaw.09G126300 Carya illinoinensis HOM05D000203 ORTHO05D000135 1.6e-07 59.3 49 59.2
Prupe.1G087700 Prunus persica HOM05D000203 ORTHO05D000135 1.6e-07 59.3 49 57.1
PGSC0003DMG400045551 Solanum tuberosum HOM05D000203 ORTHO05D000135 1.6e-07 59.3 49 65.3
THA.LOC104814288 Tarenaya hassleriana HOM05D000203 ORTHO05D000135 1.6e-07 59.3 50 62.0
THA.LOC104820689 Tarenaya hassleriana HOM05D000203 ORTHO05D000135 1.6e-07 59.3 49 57.1
Solyc04g025970.1 Solanum lycopersicum HOM05D000203 ORTHO05D000135 2.0e-07 58.9 49 65.3
Sopen10g022550 Solanum pennellii HOM05D000203 ORTHO05D000135 2.0e-07 58.9 49 63.3
Sopen10g022580 Solanum pennellii HOM05D000203 ORTHO05D000135 2.0e-07 58.9 49 63.3
Solyc10g018080.1 Solanum lycopersicum HOM05D000203 ORTHO05D000135 2.7e-07 58.5 49 65.3
PGSC0003DMG400042890 Solanum tuberosum HOM05D000203 ORTHO05D000135 2.7e-07 58.5 49 65.3
Peaxi162Scf00658g00627 Petunia axillaris HOM05D000203 ORTHO05D000135 3.5e-07 58.2 40 75.0
AT3G04100 Arabidopsis thaliana HOM05D000203 ORTHO05D000135 4.5e-07 57.8 49 53.1
Migut.A00406 Erythranthe guttata HOM05D000203 ORTHO05D000135 5.9e-07 57.4 49 59.2
Migut.A00408 Erythranthe guttata HOM05D000203 ORTHO05D000135 5.9e-07 57.4 49 59.2
Migut.K00930 Erythranthe guttata HOM05D000203 ORTHO05D000135 5.9e-07 57.4 49 59.2
MD05G1287200 Malus domestica HOM05D000203 ORTHO05D000135 5.9e-07 57.4 49 57.1
Manes.05G112000 Manihot esculenta HOM05D000203 ORTHO05D000135 5.9e-07 57.4 50 58.0
Prupe.5G243900 Prunus persica HOM05D000203 ORTHO05D000135 5.9e-07 57.4 49 55.1
PGR004G0067 Punica granatum HOM05D000203 ORTHO05D000135 5.9e-07 57.4 46 58.7
Solyc10g050900.1 Solanum lycopersicum HOM05D000203 ORTHO05D000135 5.9e-07 57.4 49 61.2
SGA_v2.0_scaffold111G31438 Striga asiatica HOM05D000203 ORTHO05D000135 5.9e-07 57.4 49 59.2
CAN.G866.40 Capsicum annuum HOM05D000203 ORTHO05D000135 7.7e-07 57.0 49 61.2
QL05p059080 Quercus lobata HOM05D000203 ORTHO05D000135 1.0e-06 56.6 49 61.2
THA.LOC104820690 Tarenaya hassleriana HOM05D000203 ORTHO05D000135 1.0e-06 56.6 78 42.3
Ciclev10007010m.g Citrus clementina HOM05D000203 ORTHO05D000135 1.3e-06 56.2 42 69.0
Sabra09G0033000 Salix brachista HOM05D000203 ORTHO05D000135 1.3e-06 56.2 50 56.0
PGSC0003DMG400038182 Solanum tuberosum HOM05D000203 ORTHO05D000135 1.3e-06 56.2 36 75.0
PGSC0003DMG400043218 Solanum tuberosum HOM05D000203 ORTHO05D000135 1.3e-06 56.2 36 75.0
Ciclev10007104m.g Citrus clementina HOM05D000203 ORTHO05D000135 1.7e-06 55.8 42 69.0
Manes.15G119500 Manihot esculenta HOM05D000203 ORTHO05D000135 1.7e-06 55.8 48 56.2
Sed0027724 Sechium edule HOM05D000203 ORTHO05D000135 1.7e-06 55.8 49 57.1
Solyc03g033880.1 Solanum lycopersicum HOM05D000203 ORTHO05D015565 1.7e-06 55.8 49 55.1
PGSC0003DMG400040226 Solanum tuberosum HOM05D000203 ORTHO05D000135 1.7e-06 55.8 49 63.3
THA.LOC104820644 Tarenaya hassleriana HOM05D000203 ORTHO05D000135 1.7e-06 55.8 46 56.5
CAN.G1038.24 Capsicum annuum HOM05D000203 ORTHO05D000135 2.2e-06 55.5 87 41.4
Dinv32276 Davidia involucrata HOM05D000203 ORTHO05D000135 2.9e-06 55.1 50 56.0
PGSC0003DMG400039674 Solanum tuberosum HOM05D000203 ORTHO05D000135 2.9e-06 55.1 49 59.2
CSS0008388 Camellia sinensis var. sinensis HOM05D000203 ORTHO05D000135 3.8e-06 54.7 47 57.4
Ciclev10006708m.g Citrus clementina HOM05D000203 ORTHO05D000135 3.8e-06 54.7 41 68.3
Glyma.10G083200 Glycine max HOM05D000203 ORTHO05D000135 3.8e-06 54.7 47 59.6
Peaxi162Scf00382g00087 Petunia axillaris HOM05D000203 ORTHO05D000135 3.8e-06 54.7 49 55.1
Sp6g22010 Schrenkiella parvula HOM05D000203 ORTHO05D000135 3.8e-06 54.7 47 57.4
Solyc10g050950.1 Solanum lycopersicum HOM05D000203 ORTHO05D000135 3.8e-06 54.7 49 57.1
Sopen03g006640 Solanum pennellii HOM05D000203 ORTHO05D015565 3.8e-06 54.7 49 55.1
Ah.01g017420 Amaranthus hybridus HOM05D000203 ORTHO05D000135 5.0e-06 54.3 46 56.5
Cfa000969 Carpinus fangiana HOM05D000203 ORTHO05D000135 5.0e-06 54.3 49 57.1
Duzib235G1529 Durio zibethinus HOM05D000203 ORTHO05D000135 5.0e-06 54.3 47 55.3
PGR042G2396 Punica granatum HOM05D000203 ORTHO05D000135 5.0e-06 54.3 46 56.5
Sed0007340 Sechium edule HOM05D000203 ORTHO05D000135 5.0e-06 54.3 48 54.2
Solyc03g033900.1 Solanum lycopersicum HOM05D000203 ORTHO05D015565 5.0e-06 54.3 49 55.1
BcaB07g32580 Brassica carinata HOM05D000203 ORTHO05D000135 6.5e-06 53.9 49 53.1
BcaB07g32581 Brassica carinata HOM05D000203 ORTHO05D000135 6.5e-06 53.9 49 53.1
BcaB07g32582 Brassica carinata HOM05D000203 ORTHO05D000135 6.5e-06 53.9 49 53.1
Medtr2g030740 Medicago truncatula HOM05D000203 ORTHO05D000135 6.5e-06 53.9 48 56.2
Potri.001G251400 Populus trichocarpa HOM05D000203 ORTHO05D000135 6.5e-06 53.9 52 53.8
Solyc03g033940.1 Solanum lycopersicum HOM05D000203 ORTHO05D015565 6.5e-06 53.9 49 53.1
SGA_v2.0_scaffold27G11644 Striga asiatica HOM05D000203 ORTHO05D000135 6.5e-06 53.9 47 55.3
Dinv40404 Davidia involucrata HOM05D000203 ORTHO05D000135 8.5e-06 53.5 50 58.0
Nitab4.5_0000592g0390 Nicotiana tabacum HOM05D000203 ORTHO05D000135 8.5e-06 53.5 115 35.7
RcHm_v2.0_Chr3g0477441 Rosa chinensis HOM05D000203 ORTHO05D000135 8.5e-06 53.5 49 51.0
Solyc03g033890.1 Solanum lycopersicum HOM05D000203 ORTHO05D015565 8.5e-06 53.5 49 53.1
Solyc10g050940.1 Solanum lycopersicum HOM05D000203 ORTHO05D000135 8.5e-06 53.5 49 57.1


User provided reference genes

Program Settings