Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0006512g0040 Nicotiana tabacum HOM05D010623 ORTHO05D012718 2.3e-246 855.5 569 100.0
Nitab4.5_0000507g0020 Nicotiana tabacum HOM05D010623 ORTHO05D012718 5.2e-182 641.7 571 65.5
CAN.G1918.1 Capsicum annuum HOM05D010623 ORTHO05D012718 9.7e-128 461.5 538 64.9
Peaxi162Scf01343g00112 Petunia axillaris HOM05D010623 ORTHO05D012718 1.7e-119 434.1 555 64.7
PGSC0003DMG400025202 Solanum tuberosum HOM05D010623 ORTHO05D012718 6.7e-113 412.1 558 58.6
Sopen08g013570 Solanum pennellii HOM05D010623 ORTHO05D012718 2.3e-105 387.1 528 58.0
Solyc08g044390.1 Solanum lycopersicum HOM05D010623 ORTHO05D012718 9.7e-104 381.7 530 57.5
Oeu060696.1 Olea europaea HOM05D010623 ORTHO05D012718 1.3e-87 328.2 329 56.2
Migut.B01424 Erythranthe guttata HOM05D010623 ORTHO05D012718 2.5e-75 287.3 344 51.5
vmacro13591 Vaccinium macrocarpon HOM05D010623 ORTHO05D012718 1.1e-70 271.9 322 50.6
SGA_v2.0_scaffold98G29380 Striga asiatica HOM05D010623 ORTHO05D012718 1.2e-69 268.5 315 50.8
Dinv43969 Davidia involucrata HOM05D010623 ORTHO05D012718 8.9e-65 252.3 239 52.7
Rhsim07G0046900 Rhododendron simsii HOM05D010623 ORTHO05D012718 8.9e-65 252.3 321 50.5
DCAR_025007 Daucus carota HOM05D010623 ORTHO05D012718 1.2e-64 251.9 322 46.0
Lj7P559T50 Lonicera japonica HOM05D010623 ORTHO05D012718 1.6e-61 241.5 261 49.4
Nn1g09223 Nelumbo nucifera HOM05D010623 ORTHO05D012718 9.2e-54 215.7 368 40.2
Nn3g19189 Nelumbo nucifera HOM05D010623 ORTHO05D012718 4.3e-51 206.8 347 37.5
Actinidia31739 Actinidia chinensis HOM05D010623 ORTHO05D012718 5.4e-30 136.7 141 52.5
Actinidia10538 Actinidia chinensis HOM05D010623 ORTHO05D012718 1.1e-25 122.5 211 37.0
Actinidia24189 Actinidia chinensis HOM05D006072 ORTHO05D007363 2.6e-16 91.3 289 31.1
Peaxi162Scf00641g00039 Petunia axillaris HOM05D006072 ORTHO05D007363 2.9e-15 87.8 286 29.0
Duzib147G1157 Durio zibethinus HOM05D006072 ORTHO05D007363 3.8e-15 87.4 285 27.0
Sc18g0004880 Simmondsia chinensis HOM05D006072 ORTHO05D007363 8.4e-15 86.3 275 28.0
Thecc.01G107000 Theobroma cacao HOM05D006072 ORTHO05D007363 1.1e-14 85.9 285 28.1
Ah.14g079240 Amaranthus hybridus HOM05D006072 ORTHO05D007363 4.2e-14 84.0 255 26.3
Cc01_g19360 Coffea canephora HOM05D006072 ORTHO05D007363 4.2e-14 84.0 296 27.7
Rhsim09G0083400 Rhododendron simsii HOM05D006072 ORTHO05D007363 4.2e-14 84.0 282 30.1
TAR622G0191 Trochodendron aralioides HOM05D006072 ORTHO05D007363 4.2e-14 84.0 300 28.7
PGSC0003DMG400019330 Solanum tuberosum HOM05D006072 ORTHO05D007363 5.5e-14 83.6 291 29.2
Nn3g16463 Nelumbo nucifera HOM05D002727 ORTHO05D002856 1.2e-13 82.4 292 30.1
DCAR_023269 Daucus carota HOM05D006072 ORTHO05D007363 2.7e-13 81.3 314 26.8
Oeu042642.1 Olea europaea HOM05D000154 ORTHO05D000092 2.7e-13 81.3 83 55.4
Eucgr.H00590 Eucalyptus grandis HOM05D006072 ORTHO05D007363 4.6e-13 80.5 300 26.7
Psat7g053120 Pisum sativum HOM05D006072 ORTHO05D007363 4.6e-13 80.5 300 28.0
GSVIVG01011570001 Vitis vinifera HOM05D006072 ORTHO05D007363 6.0e-13 80.1 273 26.4
Nitab4.5_0004318g0070 Nicotiana tabacum HOM05D006072 ORTHO05D007363 1.0e-12 79.3 288 28.1
Phvul.002G262300 Phaseolus vulgaris HOM05D006072 ORTHO05D007363 1.8e-12 78.6 306 27.5
Ah.09g224330 Amaranthus hybridus HOM05D006072 ORTHO05D007363 3.0e-12 77.8 225 26.2
EL10Ac1g00741 Beta vulgaris HOM05D006072 ORTHO05D007363 3.0e-12 77.8 232 27.6
Sabra07G0072700 Salix brachista HOM05D006072 ORTHO05D007363 3.0e-12 77.8 289 29.8
Atru.chr4.239 Acer truncatum HOM05D006072 ORTHO05D007363 5.1e-12 77.0 299 29.1
Gohir.A11G199500 Gossypium hirsutum HOM05D006072 ORTHO05D007363 5.1e-12 77.0 286 26.6
Ciclev10025690m.g Citrus clementina HOM05D006072 ORTHO05D007363 6.7e-12 76.6 302 26.2
Ah.14g079100 Amaranthus hybridus HOM05D006072 ORTHO05D007363 8.7e-12 76.3 242 25.6
AUR62003481 Chenopodium quinoa HOM05D006072 ORTHO05D007363 8.7e-12 76.3 197 27.4
Gohir.D11G224600 Gossypium hirsutum HOM05D006072 ORTHO05D007363 8.7e-12 76.3 285 26.3
TAR629G3443 Trochodendron aralioides HOM05D006072 ORTHO05D007363 8.7e-12 76.3 291 26.1
GSVIVG01011561001 Vitis vinifera HOM05D006072 ORTHO05D007363 8.7e-12 76.3 295 27.1
Cc02_g18000 Coffea canephora HOM05D006072 ORTHO05D007363 1.1e-11 75.9 292 27.7
Glyma.08G139000 Glycine max HOM05D006072 ORTHO05D007363 1.1e-11 75.9 301 26.2
Nn3g18504 Nelumbo nucifera HOM05D006072 ORTHO05D007363 1.1e-11 75.9 295 27.8
Gorai.007G241900 Gossypium raimondii HOM05D006072 ORTHO05D007363 1.5e-11 75.5 285 26.0
Lsat_1_v5_gn_3_92501 Lactuca sativa HOM05D006072 ORTHO05D007363 1.5e-11 75.5 284 26.1
Hma1.2p1_0523F.1_g172190 Hydrangea macrophylla HOM05D006072 ORTHO05D007363 1.9e-11 75.1 290 27.2
Medtr8g092370 Medicago truncatula HOM05D006072 ORTHO05D007363 1.9e-11 75.1 298 27.2
Medtr8g092700 Medicago truncatula HOM05D006072 ORTHO05D007363 1.9e-11 75.1 298 27.2
Lsat_1_v5_gn_5_36701 Lactuca sativa HOM05D006072 ORTHO05D007363 2.5e-11 74.7 271 27.7
Lj4g0019082 Lotus japonicus HOM05D006072 ORTHO05D007363 2.5e-11 74.7 293 27.6
Nitab4.5_0006309g0060 Nicotiana tabacum HOM05D006072 ORTHO05D007363 2.5e-11 74.7 288 27.1
Oeu025733.1 Olea europaea HOM05D006072 ORTHO05D007363 2.5e-11 74.7 305 27.2
AUR62015493 Chenopodium quinoa HOM05D006072 ORTHO05D007363 3.3e-11 74.3 234 25.6
Rhsim13G0107200 Rhododendron simsii HOM05D006072 ORTHO05D007363 3.3e-11 74.3 318 30.2
Sopen09g027060 Solanum pennellii HOM05D006072 ORTHO05D007363 3.3e-11 74.3 293 28.7
vmacro10627 Vaccinium macrocarpon HOM05D002727 ORTHO05D002856 3.3e-11 74.3 323 27.2
Ca_17713_v3 Cicer arietinum L. HOM05D006072 ORTHO05D007363 4.3e-11 73.9 304 26.0
Gohir.D12G095100 Gossypium hirsutum HOM05D006072 ORTHO05D007363 5.7e-11 73.6 300 26.7
Medtr8g091400 Medicago truncatula HOM05D006072 ORTHO05D007363 5.7e-11 73.6 298 27.5
Potri.005G079500 Populus trichocarpa HOM05D006072 ORTHO05D007363 5.7e-11 73.6 311 28.6
Cpa.g.sc131.23 Carica papaya HOM05D006072 ORTHO05D007363 7.4e-11 73.2 292 28.1
CSS0004323 Camellia sinensis var. sinensis HOM05D006072 ORTHO05D007363 9.7e-11 72.8 253 29.6
Cfa002714 Carpinus fangiana HOM05D006072 ORTHO05D007363 9.7e-11 72.8 260 25.0
DCAR_007283 Daucus carota HOM05D002727 ORTHO05D002856 9.7e-11 72.8 289 27.3
Migut.N01215 Erythranthe guttata HOM05D006072 ORTHO05D007363 9.7e-11 72.8 296 27.0
GSVIVG01011560001 Vitis vinifera HOM05D006072 ORTHO05D007363 1.3e-10 72.4 290 26.9
CAN.G3.7 Capsicum annuum HOM05D006072 ORTHO05D007363 1.6e-10 72.0 375 25.3
Duzib187G0709 Durio zibethinus HOM05D006072 ORTHO05D007363 1.6e-10 72.0 286 25.5
Glyma.05G181300 Glycine max HOM05D006072 ORTHO05D007363 1.6e-10 72.0 301 26.2
Lalb_Chr07g0184981 Lupinus albus HOM05D006072 ORTHO05D007363 1.6e-10 72.0 304 24.7
Medtr4g075230 Medicago truncatula HOM05D006072 ORTHO05D007363 1.6e-10 72.0 291 26.8
Peaxi162Scf00003g00145 Petunia axillaris HOM05D006072 ORTHO05D007363 2.2e-10 71.6 339 26.0
TPR.G2161 Trifolium pratense HOM05D006072 ORTHO05D007363 2.2e-10 71.6 292 26.4
Gohir.A12G093200 Gossypium hirsutum HOM05D006072 ORTHO05D007363 2.8e-10 71.2 283 26.5
Gorai.008G103500 Gossypium raimondii HOM05D006072 ORTHO05D007363 2.8e-10 71.2 300 26.3
ATR0598G294 Amborella trichopoda HOM05D006072 ORTHO05D007363 3.7e-10 70.9 251 27.1
Haze_24990 Corylus avellana HOM05D006072 ORTHO05D007363 3.7e-10 70.9 291 24.4
PGR102G0802 Punica granatum HOM05D002727 ORTHO05D002856 4.8e-10 70.5 345 25.5
AUR62002207 Chenopodium quinoa HOM05D006072 ORTHO05D007363 6.3e-10 70.1 254 25.2
FAN05G5197 Fragaria x ananassa HOM05D002727 ORTHO05D002856 6.3e-10 70.1 338 27.5
CANSAT01G0770 Cannabis sativa HOM05D006072 ORTHO05D007363 8.2e-10 69.7 253 26.9
Peaxi162Scf00003g00149 Petunia axillaris HOM05D006072 ORTHO05D007363 1.1e-09 69.3 345 24.9
Rhsim09G0083300 Rhododendron simsii HOM05D006072 ORTHO05D007363 1.1e-09 69.3 294 27.9
ECA246G2885 Erigeron canadensis HOM05D006072 ORTHO05D007363 1.4e-09 68.9 292 24.7
QL01p002288 Quercus lobata HOM05D002727 ORTHO05D002856 1.8e-09 68.6 281 27.8
Manes.12G138600 Manihot esculenta HOM05D006072 ORTHO05D007363 2.4e-09 68.2 289 25.6
SalBow3G0772 Salvia bowleyana HOM05D006072 ORTHO05D007363 2.4e-09 68.2 265 27.2
ATR0598G256 Amborella trichopoda HOM05D006072 ORTHO05D007363 3.1e-09 67.8 270 27.4
FAN14G2593 Fragaria x ananassa HOM05D002727 ORTHO05D002856 3.1e-09 67.8 335 27.8
SGA_v2.0_scaffold55G19813 Striga asiatica HOM05D006072 ORTHO05D007363 4.1e-09 67.4 292 26.4
CiPaw.03G138500 Carya illinoinensis HOM05D006072 ORTHO05D007363 5.3e-09 67.0 285 25.6
Lalb_Chr12g0203671 Lupinus albus HOM05D006072 ORTHO05D007363 5.3e-09 67.0 295 25.1
FAN05G5380 Fragaria x ananassa HOM05D002727 ORTHO05D002856 6.9e-09 66.6 335 27.8
Sed0024961 Sechium edule HOM05D002727 ORTHO05D002856 6.9e-09 66.6 287 24.7
Lj1C912T6 Lonicera japonica HOM05D010623 ORTHO05D012718 9.0e-09 66.2 106 32.1
QL06p050421 Quercus lobata HOM05D006072 ORTHO05D007363 9.0e-09 66.2 293 25.3
ClCG05G022230 Citrullus lanatus HOM05D002727 ORTHO05D002856 2.0e-08 65.1 317 26.8
FAN06G2836 Fragaria x ananassa HOM05D002727 ORTHO05D002856 3.4e-08 64.3 294 27.6
SGA_v2.0_scaffold10G05347 Striga asiatica HOM05D007205 ORTHO05D009175 3.4e-08 64.3 260 27.3
Dinv12556 Davidia involucrata HOM05D006072 ORTHO05D007363 1.7e-07 62.0 153 30.1
Cpa.g.sc72.34 Carica papaya HOM05D005305 ORTHO05D006394 2.2e-07 61.6 142 32.4
SalBow4G0595 Salvia bowleyana HOM05D006072 ORTHO05D007363 2.2e-07 61.6 272 25.7
Medtr2g007870 Medicago truncatula HOM05D005305 ORTHO05D006394 2.9e-07 61.2 173 28.9
THA.LOC104826759 Tarenaya hassleriana HOM05D007205 ORTHO05D009175 3.8e-07 60.8 276 25.7
Manes.12G149900 Manihot esculenta HOM05D005305 ORTHO05D006394 5.0e-07 60.5 144 32.6
FAN09G3462 Fragaria x ananassa HOM05D002727 ORTHO05D002856 1.1e-06 59.3 242 28.9
MD09G1127600 Malus domestica HOM05D007205 ORTHO05D009175 1.9e-06 58.5 315 24.1
EL10Ac6g14255 Beta vulgaris HOM05D002727 ORTHO05D002856 7.2e-06 56.6 298 27.9
Manes.13G081800 Manihot esculenta HOM05D005305 ORTHO05D006394 9.4e-06 56.2 168 30.4


User provided reference genes

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