Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0006504g0010 Nicotiana tabacum HOM05D009073 ORTHO05D011334 7.7e-61 236.9 114 100.0
Nitab4.5_0012476g0020 Nicotiana tabacum HOM05D009073 ORTHO05D011334 5.6e-27 124.4 63 84.1
Nitab4.5_0004408g0010 Nicotiana tabacum HOM05D009073 ORTHO05D011334 2.9e-23 112.1 54 88.9
Nitab4.5_0001343g0020 Nicotiana tabacum HOM05D009073 ORTHO05D011334 9.3e-22 107.1 52 86.5
Nitab4.5_0027002g0010 Nicotiana tabacum HOM05D009073 ORTHO05D011334 2.1e-21 105.9 51 88.2
Nitab4.5_0003923g0030 Nicotiana tabacum HOM05D009073 ORTHO05D011334 1.3e-20 103.2 51 84.3
Nitab4.5_0005821g0030 Nicotiana tabacum HOM05D009073 ORTHO05D011334 1.3e-20 103.2 51 88.2
Nitab4.5_0001618g0060 Nicotiana tabacum HOM05D009073 ORTHO05D011334 1.1e-19 100.1 52 82.7
Nitab4.5_0002942g0060 Nicotiana tabacum HOM05D009073 ORTHO05D011334 4.3e-19 98.2 51 82.4
Nitab4.5_0008108g0010 Nicotiana tabacum HOM05D009073 ORTHO05D011334 3.6e-18 95.1 55 72.7
Nitab4.5_0011284g0010 Nicotiana tabacum HOM05D009073 ORTHO05D011334 3.6e-18 95.1 49 83.7
Nitab4.5_0002381g0090 Nicotiana tabacum HOM05D009073 ORTHO05D011334 8.1e-18 94.0 55 69.1
Sopen06g005030 Solanum pennellii HOM05D008695 ORTHO05D001422 1.8e-17 92.8 113 39.8
Sopen06g011080 Solanum pennellii HOM05D008695 ORTHO05D001422 2.4e-17 92.4 113 39.8
Sopen01g015000 Solanum pennellii HOM05D008695 ORTHO05D001422 5.3e-17 91.3 113 38.9
Sopen07g009220 Solanum pennellii HOM05D008695 ORTHO05D001422 5.3e-17 91.3 113 38.9
Sopen10g008400 Solanum pennellii HOM05D000047 ORTHO05D000044 5.3e-17 91.3 113 38.9
Sopen02g008890 Solanum pennellii HOM05D008695 ORTHO05D001422 9.0e-17 90.5 113 38.1
Sopen03g011960 Solanum pennellii HOM05D008695 ORTHO05D001422 9.0e-17 90.5 113 38.9
Sopen01g013960 Solanum pennellii HOM05D008695 ORTHO05D001422 2.6e-16 89.0 113 38.1
Nitab4.5_0003865g0160 Nicotiana tabacum HOM05D009073 ORTHO05D011334 3.4e-16 88.6 45 84.4
Nitab4.5_0011234g0010 Nicotiana tabacum HOM05D009073 ORTHO05D011334 4.5e-16 88.2 45 84.4
Nitab4.5_0002213g0010 Nicotiana tabacum HOM05D009073 ORTHO05D011334 5.8e-16 87.8 41 87.8
Sopen04g013010 Solanum pennellii HOM05D008695 ORTHO05D001422 7.6e-16 87.4 113 38.1
Sopen05g021760 Solanum pennellii HOM05D008695 ORTHO05D001422 7.6e-16 87.4 113 38.1
Sopen12g021750 Solanum pennellii HOM05D000047 ORTHO05D000044 7.6e-16 87.4 113 38.9
Sopen11g014810 Solanum pennellii HOM05D008695 ORTHO05D001422 1.3e-15 86.7 113 37.2
Sopen08g015910 Solanum pennellii HOM05D000047 ORTHO05D000044 2.2e-15 85.9 102 42.2
Nitab4.5_0001980g0030 Nicotiana tabacum HOM05D009073 ORTHO05D011334 2.9e-15 85.5 45 82.2
Nitab4.5_0001017g0100 Nicotiana tabacum HOM05D009073 ORTHO05D011334 6.4e-15 84.3 46 76.1
Sopen11g013600 Solanum pennellii HOM05D008695 ORTHO05D001422 8.4e-15 84.0 113 37.2
Nitab4.5_0007893g0020 Nicotiana tabacum HOM05D009073 ORTHO05D011334 1.4e-14 83.2 46 78.3
Nitab4.5_0001705g0070 Nicotiana tabacum HOM05D009073 ORTHO05D011334 2.4e-14 82.4 43 81.4
Nitab4.5_0002554g0010 Nicotiana tabacum HOM05D009073 ORTHO05D011334 2.4e-14 82.4 46 76.1
Nitab4.5_0006193g0050 Nicotiana tabacum HOM05D009073 ORTHO05D011334 2.4e-14 82.4 45 80.0
Nitab4.5_0000652g0010 Nicotiana tabacum HOM05D008440 ORTHO05D001422 3.2e-14 82.0 86 45.3
Nitab4.5_0002880g0070 Nicotiana tabacum HOM05D009073 ORTHO05D011334 3.2e-14 82.0 44 79.5
Nitab4.5_0022368g0010 Nicotiana tabacum HOM05D009073 ORTHO05D011334 3.2e-14 82.0 45 77.8
Nitab4.5_0017199g0010 Nicotiana tabacum HOM05D009073 ORTHO05D011334 5.4e-14 81.3 43 79.1
Nitab4.5_0006877g0020 Nicotiana tabacum HOM05D009073 ORTHO05D011334 7.1e-14 80.9 45 77.8
Nitab4.5_0005061g0030 Nicotiana tabacum HOM05D008440 ORTHO05D001422 1.2e-13 80.1 86 44.2
Nitab4.5_0026237g0010 Nicotiana tabacum HOM05D008440 ORTHO05D001422 1.6e-13 79.7 86 44.2
Nitab4.5_0002851g0010 Nicotiana tabacum HOM05D008440 ORTHO05D011334 4.6e-13 78.2 97 38.1
Nitab4.5_0004952g0010 Nicotiana tabacum HOM05D008440 ORTHO05D001422 2.3e-12 75.9 86 43.0
Sopen03g009300 Solanum pennellii HOM05D004926 ORTHO05D013907 3.0e-12 75.5 106 36.8
Nitab4.5_0002702g0010 Nicotiana tabacum HOM05D008695 ORTHO05D011334 6.7e-12 74.3 59 61.0
Sopen03g019140 Solanum pennellii HOM05D000047 ORTHO05D000044 1.1e-11 73.6 106 35.8
Sopen03g015690 Solanum pennellii HOM05D008695 ORTHO05D001422 2.5e-11 72.4 106 37.7
Sopen08g011480 Solanum pennellii HOM05D008695 ORTHO05D001422 3.3e-11 72.0 106 36.8
CAN.G1452.1 Capsicum annuum HOM05D008695 ORTHO05D006375 4.3e-11 71.6 103 35.9
Nitab4.5_0024891g0010 Nicotiana tabacum HOM05D008440 ORTHO05D006375 4.3e-11 71.6 80 42.5
Nitab4.5_0004056g0050 Nicotiana tabacum HOM05D009073 ORTHO05D011334 5.6e-11 71.2 69 47.8
Sopen01g029360 Solanum pennellii HOM05D000047 ORTHO05D000589 7.4e-11 70.9 106 34.9
Sopen01g027720 Solanum pennellii HOM05D008695 ORTHO05D001422 9.6e-11 70.5 102 38.2
Nitab4.5_0000199g0080 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.6e-10 69.7 105 36.2
Nitab4.5_0000235g0090 Nicotiana tabacum HOM05D008440 ORTHO05D006375 2.1e-10 69.3 80 42.5
Nitab4.5_0000773g0020 Nicotiana tabacum HOM05D009073 ORTHO05D011334 2.1e-10 69.3 45 71.1
Nitab4.5_0000324g0260 Nicotiana tabacum HOM05D004926 ORTHO05D006375 3.6e-10 68.6 105 36.2
Sopen10g027680 Solanum pennellii HOM05D004926 ORTHO05D013907 3.6e-10 68.6 101 34.7
Nitab4.5_0000235g0100 Nicotiana tabacum HOM05D008440 ORTHO05D006375 4.8e-10 68.2 80 41.2
Nitab4.5_0009741g0030 Nicotiana tabacum HOM05D004926 ORTHO05D006375 4.8e-10 68.2 100 37.0
Sopen09g011950 Solanum pennellii HOM05D000047 ORTHO05D000044 6.2e-10 67.8 93 35.5
Nitab4.5_0000157g0030 Nicotiana tabacum HOM05D008440 ORTHO05D011334 8.1e-10 67.4 80 40.0
Nitab4.5_0001832g0060 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.1e-09 67.0 105 35.2
Nitab4.5_0000643g0040 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.4e-09 66.6 105 35.2
Sopen01g011600 Solanum pennellii HOM05D008695 ORTHO05D001422 1.4e-09 66.6 102 37.3
Sopen01g018140 Solanum pennellii HOM05D008695 ORTHO05D001422 1.8e-09 66.2 102 37.3
Sopen04g011230 Solanum pennellii HOM05D000014 ORTHO05D000589 1.8e-09 66.2 111 32.4
Nitab4.5_0000342g0240 Nicotiana tabacum HOM05D008440 ORTHO05D001422 3.1e-09 65.5 86 37.2
Nitab4.5_0003555g0010 Nicotiana tabacum HOM05D004926 ORTHO05D006375 5.3e-09 64.7 102 34.3
Sopen07g013820 Solanum pennellii HOM05D000047 ORTHO05D001422 6.9e-09 64.3 91 34.1
Nitab4.5_0000775g0180 Nicotiana tabacum HOM05D004926 ORTHO05D006375 9.0e-09 63.9 104 33.7
Nitab4.5_0001850g0050 Nicotiana tabacum HOM05D008440 ORTHO05D006375 9.0e-09 63.9 99 34.3
Nitab4.5_0015285g0010 Nicotiana tabacum HOM05D008440 ORTHO05D006375 9.0e-09 63.9 88 37.5
Nitab4.5_0000587g0030 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.5e-08 63.2 105 32.4
Nitab4.5_0012379g0020 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.5e-08 63.2 105 36.2
Sopen05g011410 Solanum pennellii HOM05D004926 ORTHO05D013907 1.5e-08 63.2 96 37.5
Nitab4.5_0002799g0020 Nicotiana tabacum HOM05D009073 ORTHO05D011334 2.0e-08 62.8 72 50.0
Nitab4.5_0001239g0190 Nicotiana tabacum HOM05D008440 ORTHO05D006375 2.6e-08 62.4 74 43.2
Nitab4.5_0001338g0120 Nicotiana tabacum HOM05D004926 ORTHO05D006375 3.4e-08 62.0 105 32.4
Sopen01g010260 Solanum pennellii HOM05D000047 ORTHO05D000044 4.5e-08 61.6 93 34.4
Nitab4.5_0000073g0430 Nicotiana tabacum HOM05D004926 ORTHO05D006375 5.8e-08 61.2 102 32.4
Nitab4.5_0000396g0210 Nicotiana tabacum HOM05D004926 ORTHO05D006375 5.8e-08 61.2 96 34.4
Sopen05g019090 Solanum pennellii HOM05D008695 ORTHO05D001422 5.8e-08 61.2 102 35.3
Nitab4.5_0008949g0010 Nicotiana tabacum HOM05D008440 ORTHO05D006375 7.6e-08 60.8 95 31.6
Nitab4.5_0022142g0010 Nicotiana tabacum HOM05D009073 ORTHO05D011334 7.6e-08 60.8 42 69.0
Nitab4.5_0000053g0110 Nicotiana tabacum HOM05D004926 ORTHO05D006375 9.9e-08 60.5 100 35.0
Nitab4.5_0000157g0050 Nicotiana tabacum HOM05D004926 ORTHO05D006375 9.9e-08 60.5 105 32.4
Nitab4.5_0000389g0030 Nicotiana tabacum HOM05D009073 ORTHO05D011334 9.9e-08 60.5 40 57.5
Nitab4.5_0019913g0010 Nicotiana tabacum HOM05D002047 ORTHO05D001422 9.9e-08 60.5 88 36.4
Nitab4.5_0028204g0010 Nicotiana tabacum HOM05D004926 ORTHO05D006375 2.2e-07 59.3 91 35.2
Sopen04g023930 Solanum pennellii HOM05D004926 ORTHO05D013907 2.9e-07 58.9 88 36.4
Nitab4.5_0000462g0030 Nicotiana tabacum HOM05D004926 ORTHO05D006375 3.8e-07 58.5 105 32.4
Nitab4.5_0000109g0590 Nicotiana tabacum HOM05D004926 ORTHO05D006375 4.9e-07 58.2 88 31.8
Nitab4.5_0001785g0010 Nicotiana tabacum HOM05D002047 ORTHO05D001422 4.9e-07 58.2 88 35.2
Nitab4.5_0001843g0010 Nicotiana tabacum HOM05D004926 ORTHO05D006375 4.9e-07 58.2 105 33.3
Nitab4.5_0002662g0010 Nicotiana tabacum HOM05D002047 ORTHO05D001422 4.9e-07 58.2 88 34.1
Nitab4.5_0007494g0050 Nicotiana tabacum HOM05D002047 ORTHO05D001422 4.9e-07 58.2 87 35.6
Nitab4.5_0013909g0010 Nicotiana tabacum HOM05D002047 ORTHO05D001422 4.9e-07 58.2 88 34.1
Nitab4.5_0001560g0010 Nicotiana tabacum HOM05D002047 ORTHO05D001422 6.4e-07 57.8 88 34.1
Nitab4.5_0011116g0010 Nicotiana tabacum HOM05D002047 ORTHO05D001422 6.4e-07 57.8 88 34.1
Nitab4.5_0002149g0070 Nicotiana tabacum HOM05D002047 ORTHO05D001422 8.4e-07 57.4 88 34.1
Nitab4.5_0004532g0050 Nicotiana tabacum HOM05D004926 ORTHO05D006375 8.4e-07 57.4 94 34.0
Sopen11g018120 Solanum pennellii HOM05D008695 ORTHO05D001422 1.1e-06 57.0 113 31.0
Nitab4.5_0005138g0020 Nicotiana tabacum HOM05D004926 ORTHO05D006375 1.9e-06 56.2 90 33.3
Nitab4.5_0000340g0110 Nicotiana tabacum HOM05D002047 ORTHO05D001422 2.4e-06 55.8 86 33.7
PGSC0003DMG400014865 Solanum tuberosum HOM05D008695 ORTHO05D001422 2.4e-06 55.8 59 45.8
Nitab4.5_0001617g0090 Nicotiana tabacum HOM05D009073 ORTHO05D011334 3.2e-06 55.5 28 82.1
Sopen06g012970 Solanum pennellii HOM05D007487 ORTHO05D008561 3.2e-06 55.5 85 32.9
Sopen02g001670 Solanum pennellii HOM05D007487 ORTHO05D008561 4.2e-06 55.1 85 32.9
Nitab4.5_0001155g0110 Nicotiana tabacum HOM05D002047 ORTHO05D001422 5.5e-06 54.7 88 31.8
Nitab4.5_0005994g0090 Nicotiana tabacum HOM05D002047 ORTHO05D001422 5.5e-06 54.7 88 31.8
Nitab4.5_0009372g0010 Nicotiana tabacum HOM05D002047 ORTHO05D001422 5.5e-06 54.7 78 37.2
Sopen00g004230 Solanum pennellii HOM05D000047 ORTHO05D000589 5.5e-06 54.7 83 31.3
Nitab4.5_0003148g0040 Nicotiana tabacum HOM05D002047 ORTHO05D001422 7.1e-06 54.3 88 33.0
Nitab4.5_0007649g0030 Nicotiana tabacum HOM05D002047 ORTHO05D001422 7.1e-06 54.3 88 31.8
Sopen01g015240 Solanum pennellii HOM05D007487 ORTHO05D008561 7.1e-06 54.3 85 32.9
Sopen03g024880 Solanum pennellii HOM05D007487 ORTHO05D008561 7.1e-06 54.3 82 34.1
Sopen03g025980 Solanum pennellii HOM05D010031 ORTHO05D012898 7.1e-06 54.3 86 38.4
Nitab4.5_0000468g0160 Nicotiana tabacum HOM05D002047 ORTHO05D001422 9.3e-06 53.9 88 33.0
Sopen06g007780 Solanum pennellii HOM05D009746 ORTHO05D008561 9.3e-06 53.9 98 34.7


User provided reference genes

Program Settings