Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0006502g0080 Nicotiana tabacum HOM05D001966 ORTHO05D010986 1.6e-31 138.7 65 100.0
Nitab4.5_0007400g0150 Nicotiana tabacum HOM05D001966 ORTHO05D010986 7.1e-27 123.2 65 89.2
ClCG02G009760 Citrullus lanatus HOM05D001966 ORTHO05D000002 9.6e-24 112.8 61 85.2
Nitab4.5_0001170g0070 Nicotiana tabacum HOM05D008037 ORTHO05D004271 8.4e-20 99.8 64 75.0
SHI36395 Sapria himalayana HOM05D001966 ORTHO05D010986 6.0e-18 93.6 61 75.4
Sopen10g016570 Solanum pennellii HOM05D008037 ORTHO05D004271 8.7e-17 89.7 69 66.7
Peaxi162Scf00994g00002 Petunia axillaris HOM05D001966 ORTHO05D010986 2.1e-15 85.1 54 77.8
arahy.Tifrunner.gnm1.ann1.DY3820 Arachis hypogaea HOM05D000445 ORTHO05D010986 2.8e-15 84.7 61 70.5
arahy.Tifrunner.gnm1.ann1.WI2XKB Arachis hypogaea HOM05D001966 ORTHO05D007227 2.8e-15 84.7 61 70.5
arahy.Tifrunner.gnm1.ann1.ZMH4QB Arachis hypogaea HOM05D001966 ORTHO05D010986 2.8e-15 84.7 61 70.5
arahy.Tifrunner.gnm1.ann1.MCF6CI Arachis hypogaea HOM05D001966 ORTHO05D010986 8.2e-15 83.2 61 68.9
Nitab4.5_0001986g0110 Nicotiana tabacum HOM05D001966 ORTHO05D010986 1.8e-14 82.0 69 65.2
Nitab4.5_0004137g0080 Nicotiana tabacum HOM05D001966 ORTHO05D010986 5.3e-14 80.5 54 75.9
Nitab4.5_0012234g0090 Nicotiana tabacum HOM05D001966 ORTHO05D010986 9.0e-14 79.7 64 65.6
FAN26G1474 Fragaria x ananassa HOM05D001966 ORTHO05D010986 2.0e-13 78.6 60 70.0
Nitab4.5_0001761g0140 Nicotiana tabacum HOM05D001966 ORTHO05D010986 2.0e-13 78.6 41 87.8
Peaxi162Scf01600g00007 Petunia axillaris HOM05D001966 ORTHO05D010986 3.4e-13 77.8 53 73.6
CARHR282380 Cardamine hirsuta HOM05D001966 ORTHO05D010986 4.5e-13 77.4 61 67.2
CARHR282500 Cardamine hirsuta HOM05D001966 ORTHO05D010986 4.5e-13 77.4 61 67.2
Hma1.2p1_0594F.1_g185800 Hydrangea macrophylla HOM05D001966 ORTHO05D010986 5.9e-13 77.0 60 70.0
Sc25g0002010 Simmondsia chinensis HOM05D001966 ORTHO05D007227 5.9e-13 77.0 51 74.5
Aqoxy38s012 Aquilegia oxysepala HOM05D001966 ORTHO05D010986 1.0e-12 76.3 51 74.5
Aqoxy4G02030 Aquilegia oxysepala HOM05D001966 ORTHO05D010986 1.0e-12 76.3 51 74.5
arahy.Tifrunner.gnm1.ann1.8D90VP Arachis hypogaea HOM05D001966 ORTHO05D007227 1.0e-12 76.3 61 65.6
Cpa.g.sc23.86 Carica papaya HOM05D001966 ORTHO05D010986 1.0e-12 76.3 51 74.5
CsaV3_UNG196500 Cucumis sativus L. HOM05D001966 ORTHO05D010986 1.0e-12 76.3 51 74.5
FAN01G2668 Fragaria x ananassa HOM05D001966 ORTHO05D007227 1.0e-12 76.3 53 69.8
Sed0001789 Sechium edule HOM05D001966 ORTHO05D010986 1.0e-12 76.3 51 74.5
Sed0007694 Sechium edule HOM05D001966 ORTHO05D010986 1.0e-12 76.3 51 74.5
Sed0023467 Sechium edule HOM05D001966 ORTHO05D010986 1.0e-12 76.3 51 74.5
Sed0025793 Sechium edule HOM05D001966 ORTHO05D010986 1.0e-12 76.3 51 74.5
Nitab4.5_0009355g0010 Nicotiana tabacum HOM05D001966 ORTHO05D010986 2.2e-12 75.1 38 92.1
Lsat_1_v5_gn_2_20521 Lactuca sativa HOM05D001966 ORTHO05D007227 2.9e-12 74.7 61 67.2
Lsat_1_v5_gn_3_110440 Lactuca sativa HOM05D001966 ORTHO05D007227 2.9e-12 74.7 61 67.2
Lsat_1_v5_gn_5_181880 Lactuca sativa HOM05D001966 ORTHO05D007227 2.9e-12 74.7 61 67.2
Lsat_1_v5_gn_6_94301 Lactuca sativa HOM05D001966 ORTHO05D007227 2.9e-12 74.7 61 67.2
Lsat_1_v5_gn_9_39281 Lactuca sativa HOM05D001966 ORTHO05D007227 5.0e-12 73.9 51 72.5
Cfa023005 Carpinus fangiana HOM05D001966 ORTHO05D010986 6.5e-12 73.6 51 72.5
Sc05g0004140 Simmondsia chinensis HOM05D001966 ORTHO05D011119 6.5e-12 73.6 51 70.6
Oeu041412.1 Olea europaea HOM05D001966 ORTHO05D010986 1.9e-11 72.0 54 68.5
COL.COLO4_03213 Corchorus olitorius HOM05D001966 ORTHO05D010986 2.5e-11 71.6 45 77.8
ClCG09G021430 Citrullus lanatus HOM05D001966 ORTHO05D010986 7.2e-11 70.1 51 70.6
Nitab4.5_0000002g0300 Nicotiana tabacum HOM05D001966 ORTHO05D010055 3.5e-10 67.8 41 73.2
SHI27036 Sapria himalayana HOM05D001966 ORTHO05D010986 1.3e-09 65.9 55 61.8
arahy.Tifrunner.gnm1.ann1.LY649L Arachis hypogaea HOM05D001966 ORTHO05D010986 1.8e-09 65.5 53 60.4
SHI26755 Sapria himalayana HOM05D001966 ORTHO05D010986 1.8e-09 65.5 39 74.4
AL9U11930 Arabidopsis lyrata HOM05D001966 ORTHO05D007227 3.9e-09 64.3 32 90.6
BcaB02g11353 Brassica carinata HOM05D007952 ORTHO05D009823 3.9e-09 64.3 32 90.6
BcaNung07085 Brassica carinata HOM05D001966 ORTHO05D010449 3.9e-09 64.3 32 90.6
BolSC29t60538H Brassica oleracea HOM05D008016 ORTHO05D010986 3.9e-09 64.3 32 90.6
BolSC49t61132H Brassica oleracea HOM05D001966 ORTHO05D010986 3.9e-09 64.3 32 90.6
arahy.Tifrunner.gnm1.ann1.92D98S Arachis hypogaea HOM05D000533 ORTHO05D006151 5.1e-09 63.9 31 90.3
arahy.Tifrunner.gnm1.ann1.FN06MZ Arachis hypogaea HOM05D000533 ORTHO05D006151 5.1e-09 63.9 31 90.3
arahy.Tifrunner.gnm1.ann1.JR5HFJ Arachis hypogaea HOM05D000533 ORTHO05D006151 5.1e-09 63.9 31 90.3
EL10As10g23965 Beta vulgaris HOM05D001966 ORTHO05D007227 1.9e-08 62.0 31 90.3
Peaxi162Scf00080g00518 Petunia axillaris HOM05D001966 ORTHO05D007227 3.3e-08 61.2 35 82.9
Sed0008904 Sechium edule HOM05D001966 ORTHO05D007227 1.3e-07 59.3 31 87.1
arahy.Tifrunner.gnm1.ann1.X4EL03 Arachis hypogaea HOM05D001966 ORTHO05D010986 1.6e-07 58.9 31 87.1
VMungo1233G0001 Vigna mungo HOM05D001966 ORTHO05D010986 3.7e-07 57.8 31 80.6
CSS0015594 Camellia sinensis var. sinensis HOM05D001966 ORTHO05D010986 4.8e-07 57.4 43 67.4
Psat7g093280 Pisum sativum HOM05D001966 ORTHO05D010986 1.4e-06 55.8 55 58.2
Lsat_1_v5_gn_3_13340 Lactuca sativa HOM05D001966 ORTHO05D007227 5.3e-06 53.9 43 62.8


User provided reference genes

Program Settings