Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0006502g0070 Nicotiana tabacum HOM05D008037 ORTHO05D004271 1.8e-50 202.2 95 100.0
MBI08_g48225_MAGBIO Magnolia biondii HOM05D008037 ORTHO05D004271 8.2e-40 166.8 94 84.0
Nitab4.5_0001727g0130 Nicotiana tabacum HOM05D008037 ORTHO05D004271 5.3e-39 164.1 94 83.0
EL10As10g23963 Beta vulgaris HOM05D008037 ORTHO05D004271 2.2e-37 158.7 90 84.4
arahy.Tifrunner.gnm1.ann1.20TFSQ Arachis hypogaea HOM05D008037 ORTHO05D004271 2.9e-37 158.3 94 81.9
arahy.Tifrunner.gnm1.ann1.P2FSG5 Arachis hypogaea HOM05D008037 ORTHO05D004271 2.9e-37 158.3 94 81.9
Hund25912 Selenicereus undatus HOM05D008037 ORTHO05D004271 5.5e-36 154.1 90 82.2
Hund27633 Selenicereus undatus HOM05D008037 ORTHO05D004271 5.5e-36 154.1 90 82.2
Hund27757 Selenicereus undatus HOM05D008037 ORTHO05D004271 5.5e-36 154.1 90 82.2
Hund27833 Selenicereus undatus HOM05D008037 ORTHO05D004271 5.5e-36 154.1 90 82.2
Hund28332 Selenicereus undatus HOM05D008037 ORTHO05D004271 5.5e-36 154.1 90 82.2
Hund28440 Selenicereus undatus HOM05D008037 ORTHO05D004271 5.5e-36 154.1 90 82.2
Hund28538 Selenicereus undatus HOM05D008037 ORTHO05D004271 5.5e-36 154.1 90 82.2
Hund28614 Selenicereus undatus HOM05D008037 ORTHO05D004271 5.5e-36 154.1 90 82.2
Hund28956 Selenicereus undatus HOM05D008037 ORTHO05D004271 5.5e-36 154.1 90 82.2
Hund28981 Selenicereus undatus HOM05D008037 ORTHO05D004271 5.5e-36 154.1 90 82.2
Hund29028 Selenicereus undatus HOM05D008037 ORTHO05D004271 5.5e-36 154.1 90 82.2
Hund29091 Selenicereus undatus HOM05D008037 ORTHO05D004271 5.5e-36 154.1 90 82.2
Hund29181 Selenicereus undatus HOM05D008037 ORTHO05D004271 5.5e-36 154.1 90 82.2
Hund29249 Selenicereus undatus HOM05D008037 ORTHO05D004271 5.5e-36 154.1 90 82.2
Hund29256 Selenicereus undatus HOM05D008037 ORTHO05D004271 5.5e-36 154.1 90 82.2
Hund29263 Selenicereus undatus HOM05D008037 ORTHO05D004271 5.5e-36 154.1 90 82.2
Hund29290 Selenicereus undatus HOM05D008037 ORTHO05D004271 5.5e-36 154.1 90 82.2
Hund29318 Selenicereus undatus HOM05D008037 ORTHO05D004271 5.5e-36 154.1 90 82.2
Hund29436 Selenicereus undatus HOM05D008037 ORTHO05D004271 5.5e-36 154.1 90 82.2
Hund29853 Selenicereus undatus HOM05D008037 ORTHO05D004271 5.5e-36 154.1 90 82.2
Hund30002 Selenicereus undatus HOM05D008037 ORTHO05D004271 5.5e-36 154.1 90 82.2
Hund30263 Selenicereus undatus HOM05D008037 ORTHO05D004271 5.5e-36 154.1 90 82.2
Hund30448 Selenicereus undatus HOM05D008037 ORTHO05D004271 5.5e-36 154.1 90 82.2
Hund30632 Selenicereus undatus HOM05D008037 ORTHO05D004271 5.5e-36 154.1 90 82.2
Hund30993 Selenicereus undatus HOM05D008037 ORTHO05D004271 5.5e-36 154.1 90 82.2
SHI36397 Sapria himalayana HOM05D008037 ORTHO05D004271 1.8e-34 149.1 94 79.8
Sopen02g009090 Solanum pennellii HOM05D008037 ORTHO05D004271 6.7e-34 147.1 91 79.1
Medtr4g006040 Medicago truncatula HOM05D008037 ORTHO05D009823 1.1e-33 146.4 94 76.6
arahy.Tifrunner.gnm1.ann1.ASR258 Arachis hypogaea HOM05D008037 ORTHO05D004271 1.3e-32 142.9 94 77.7
Solyc00g500344.1 Solanum lycopersicum HOM05D008037 ORTHO05D004271 1.9e-28 129.0 75 82.7
CAN.G593.3 Capsicum annuum HOM05D001966 ORTHO05D004271 1.1e-23 113.2 60 86.7
Nitab4.5_0000066g0170 Nicotiana tabacum HOM05D008037 ORTHO05D004271 5.3e-23 110.9 98 61.2
Nitab4.5_0012234g0010 Nicotiana tabacum HOM05D008037 ORTHO05D004271 1.3e-21 106.3 94 61.7
Nitab4.5_0008665g0060 Nicotiana tabacum HOM05D008037 ORTHO05D004271 2.9e-21 105.1 98 59.2
arahy.Tifrunner.gnm1.ann1.LBLK2X Arachis hypogaea HOM05D008037 ORTHO05D004271 5.0e-21 104.4 94 58.5
Nitab4.5_0001170g0070 Nicotiana tabacum HOM05D008037 ORTHO05D004271 1.1e-20 103.2 58 79.3
Sopen10g016570 Solanum pennellii HOM05D008037 ORTHO05D004271 7.2e-20 100.5 66 74.2
Zm00001eb441600 Zea mays HOM05D008037 ORTHO05D004271 2.1e-19 99.0 58 81.0
Sed0000516 Sechium edule HOM05D008037 ORTHO05D004271 1.1e-15 86.7 65 69.2
Nitab4.5_0004841g0080 Nicotiana tabacum HOM05D008037 ORTHO05D004271 1.8e-15 85.9 54 72.2
arahy.Tifrunner.gnm1.ann1.54SFA9 Arachis hypogaea HOM05D008037 ORTHO05D004271 7.0e-15 84.0 60 71.7
EL10Ac6g13942 Beta vulgaris HOM05D008037 ORTHO05D004271 5.9e-14 80.9 48 81.2
Nitab4.5_0001986g0120 Nicotiana tabacum HOM05D008037 ORTHO05D004271 1.0e-13 80.1 88 53.4
arahy.Tifrunner.gnm1.ann1.KSIE27 Arachis hypogaea HOM05D008037 ORTHO05D004271 1.7e-13 79.3 57 66.7
arahy.Tifrunner.gnm1.ann1.WFJR7S Arachis hypogaea HOM05D008037 ORTHO05D004271 2.1e-11 72.4 94 47.9
BcaC05g27379 Brassica carinata HOM05D008016 ORTHO05D021751 1.0e-10 70.1 91 51.6
BolSC45t60899H Brassica oleracea HOM05D008016 ORTHO05D004271 1.0e-10 70.1 52 73.1
Solyc03g058260.1 Solanum lycopersicum HOM05D008037 ORTHO05D004271 1.8e-10 69.3 64 54.7
Nitab4.5_0004137g0070 Nicotiana tabacum HOM05D008037 ORTHO05D004271 1.2e-09 66.6 60 63.3
CDE02G0533 Ceratophyllum demersum HOM05D008037 ORTHO05D004271 3.4e-09 65.1 68 54.4
Solyc03g150126.1 Solanum lycopersicum HOM05D008037 ORTHO05D004271 7.5e-09 63.9 99 44.4
Peaxi162Scf00080g00520 Petunia axillaris HOM05D008037 ORTHO05D004271 2.2e-08 62.4 36 83.3
Lalb_Chr20g0115041 Lupinus albus HOM05D008016 ORTHO05D004271 1.1e-07 60.1 51 60.8
EL10Ac9g22450 Beta vulgaris HOM05D008037 ORTHO05D004271 2.4e-07 58.9 29 89.7
Nitab4.5_0001761g0150 Nicotiana tabacum HOM05D008037 ORTHO05D004271 3.5e-06 55.1 30 80.0
arahy.Tifrunner.gnm1.ann1.JURL6Q Arachis hypogaea HOM05D001966 ORTHO05D007227 4.5e-06 54.7 78 43.6
arahy.Tifrunner.gnm1.ann1.KJ09M7 Arachis hypogaea HOM05D008037 ORTHO05D004271 4.5e-06 54.7 78 43.6
Phvul.009G203800 Phaseolus vulgaris HOM05D008037 ORTHO05D004271 4.5e-06 54.7 30 86.7
RhsimPtG0005300 Rhododendron simsii HOM05D001966 ORTHO05D007227 4.5e-06 54.7 51 58.8
Manes.07G046200 Manihot esculenta HOM05D008037 ORTHO05D004271 5.9e-06 54.3 37 67.6
AL9U11930 Arabidopsis lyrata HOM05D001966 ORTHO05D007227 7.8e-06 53.9 30 80.0
BcaB02g11353 Brassica carinata HOM05D007952 ORTHO05D009823 7.8e-06 53.9 30 80.0
Lsat_1_v5_gn_4_63021 Lactuca sativa HOM05D007952 ORTHO05D009823 7.8e-06 53.9 30 80.0
Solyc09g011150.1 Solanum lycopersicum HOM05D008037 ORTHO05D004271 7.8e-06 53.9 30 80.0


User provided reference genes

Program Settings