Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0006502g0060 Nicotiana tabacum HOM05D001070 ORTHO05D005132 2.5e-56 221.9 110 100.0
Solyc00g500042.1 Solanum lycopersicum HOM05D001070 ORTHO05D005132 1.6e-26 122.9 204 40.7
Solyc00g500125.1 Solanum lycopersicum HOM05D001070 ORTHO05D005132 1.6e-26 122.9 204 40.7
Peaxi162Scf00030g02113 Petunia axillaris HOM05D001070 ORTHO05D005132 1.1e-24 116.7 66 87.9
Peaxi162Scf01305g00038 Petunia axillaris HOM05D001070 ORTHO05D005132 1.5e-24 116.3 70 84.3
Solyc11g021260.1 Solanum lycopersicum HOM05D001070 ORTHO05D005132 3.8e-20 101.7 61 78.7
Nitab4.5_0007104g0080 Nicotiana tabacum HOM05D001070 ORTHO05D005132 5.4e-19 97.8 52 86.5
Migut.D01247 Erythranthe guttata HOM05D001070 ORTHO05D005132 3.5e-18 95.1 152 37.5
Hma1.2p1_0096F.1_g047620 Hydrangea macrophylla HOM05D001070 ORTHO05D005132 3.5e-18 95.1 201 31.8
GSVIVG01005309001 Vitis vinifera HOM05D001070 ORTHO05D005132 2.8e-15 85.5 122 45.9
RcHm_v2.0_Chr7g0212321 Rosa chinensis HOM05D001070 ORTHO05D005132 1.4e-14 83.2 203 31.5
DCAR_032544 Daucus carota HOM05D001070 ORTHO05D002096 3.4e-13 78.6 64 56.2
EL10Ac1g01959 Beta vulgaris HOM05D001070 ORTHO05D005132 1.7e-12 76.3 188 29.3
EL10As1g23055 Beta vulgaris HOM05D001070 ORTHO05D005132 1.7e-12 76.3 188 29.3
PGR111G0057 Punica granatum HOM05D001070 ORTHO05D002096 4.9e-12 74.7 108 40.7
Solyc07g041680.2 Solanum lycopersicum HOM05D001070 ORTHO05D005132 3.2e-11 72.0 40 82.5
Nn1g08629 Nelumbo nucifera HOM05D001070 ORTHO05D005132 5.4e-11 71.2 67 55.2
PSO357G0618 Papaver somniferum HOM05D001070 ORTHO05D005132 1.6e-10 69.7 75 49.3
PSO548G0067 Papaver somniferum HOM05D001070 ORTHO05D002096 1.6e-10 69.7 75 49.3
Peaxi162Scf00080g00521 Petunia axillaris HOM05D001070 ORTHO05D005132 4.6e-10 68.2 34 85.3
Nitab4.5_0012234g0050 Nicotiana tabacum HOM05D001070 ORTHO05D005132 3.9e-09 65.1 75 50.7
Gorai.011G078900 Gossypium raimondii HOM05D001070 ORTHO05D005132 1.1e-08 63.5 53 52.8
Gohir.A13G086425 Gossypium hirsutum HOM05D001070 ORTHO05D005132 7.3e-08 60.8 53 52.8
Gorai.002G064200 Gossypium raimondii HOM05D001070 ORTHO05D005132 1.3e-07 60.1 82 46.3
CAN.G1139.17 Capsicum annuum HOM05D001070 ORTHO05D005132 1.6e-07 59.7 111 36.9
Gohir.A09G045792 Gossypium hirsutum HOM05D001070 ORTHO05D005132 3.6e-07 58.5 53 50.9
Nn029s41577 Nelumbo nucifera HOM05D001070 ORTHO05D005132 1.1e-06 57.0 37 70.3
Nn304s46233 Nelumbo nucifera HOM05D001070 ORTHO05D002096 1.8e-06 56.2 91 39.6
arahy.Tifrunner.gnm1.ann1.B1X1LX Arachis hypogaea HOM05D001070 ORTHO05D005132 4.0e-06 55.1 44 59.1
Nitab4.5_0004137g0040 Nicotiana tabacum HOM05D001070 ORTHO05D010233 4.0e-06 55.1 74 47.3
HanXRQChr00c0336g0573711 Helianthus annuus HOM05D001070 ORTHO05D005132 9.0e-06 53.9 99 36.4
HanXRQChr02g0059751 Helianthus annuus HOM05D001070 ORTHO05D005132 9.0e-06 53.9 99 36.4
HanXRQChr03g0087621 Helianthus annuus HOM05D001070 ORTHO05D005132 9.0e-06 53.9 99 36.4
HanXRQChr09g0258471 Helianthus annuus HOM05D001070 ORTHO05D005132 9.0e-06 53.9 99 36.4
HanXRQChr15g0465411 Helianthus annuus HOM05D001070 ORTHO05D005132 9.0e-06 53.9 99 36.4
HanXRQChr15g0465481 Helianthus annuus HOM05D001070 ORTHO05D005132 9.0e-06 53.9 99 36.4
HanXRQChr17g0569701 Helianthus annuus HOM05D001070 ORTHO05D005132 9.0e-06 53.9 99 36.4
HanXRQCPg0580321 Helianthus annuus HOM05D001070 ORTHO05D005132 9.0e-06 53.9 99 36.4


User provided reference genes

Program Settings