Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0006502g0020 Nicotiana tabacum HOM05D001966 ORTHO05D010055 4.6e-64 247.7 119 100.0
Peaxi162Scf00687g00611 Petunia axillaris HOM05D001966 ORTHO05D010055 5.1e-47 191.0 123 76.4
EL10As10g23964 Beta vulgaris HOM05D001966 ORTHO05D010055 3.6e-45 184.9 122 77.9
Lsat_1_v5_gn_4_68181 Lactuca sativa HOM05D008016 ORTHO05D010055 1.7e-34 149.4 141 59.6
vmacro22417 Vaccinium macrocarpon HOM05D008354 ORTHO05D010055 1.2e-32 143.3 119 63.9
Hma1.2p1_0594F.1_g185800 Hydrangea macrophylla HOM05D001966 ORTHO05D010986 1.3e-31 139.8 118 65.3
FAN26G1474 Fragaria x ananassa HOM05D001966 ORTHO05D010986 3.0e-31 138.7 115 64.3
Nitab4.5_0003101g0110 Nicotiana tabacum HOM05D008354 ORTHO05D010055 1.1e-30 136.7 116 62.1
Nitab4.5_0008665g0040 Nicotiana tabacum HOM05D001070 ORTHO05D002096 3.3e-30 135.2 116 62.1
ClCG02G009760 Citrullus lanatus HOM05D001966 ORTHO05D000002 6.2e-29 131.0 122 61.5
Nitab4.5_0001170g0070 Nicotiana tabacum HOM05D008037 ORTHO05D004271 3.1e-28 128.6 114 59.6
Nitab4.5_0000002g0300 Nicotiana tabacum HOM05D001966 ORTHO05D010055 2.2e-26 122.5 115 58.3
Nitab4.5_0012234g0020 Nicotiana tabacum HOM05D008016 ORTHO05D010055 6.5e-26 120.9 133 54.1
Nitab4.5_0004137g0030 Nicotiana tabacum HOM05D008354 ORTHO05D010055 5.1e-23 111.3 119 56.3
CAN.G386.21 Capsicum annuum HOM05D001966 ORTHO05D010055 1.1e-22 110.2 101 61.4
Nitab4.5_0004841g0090 Nicotiana tabacum HOM05D008354 ORTHO05D010055 7.4e-22 107.5 96 62.5
vmacro22395 Vaccinium macrocarpon HOM05D008016 ORTHO05D004271 4.1e-20 101.7 54 87.0
vmacro22420 Vaccinium macrocarpon HOM05D008016 ORTHO05D010055 4.1e-20 101.7 54 87.0
Nitab4.5_0001727g0120 Nicotiana tabacum HOM05D008016 ORTHO05D010055 6.9e-20 100.9 117 53.0
CAN.G134.6 Capsicum annuum HOM05D008037 ORTHO05D004271 5.9e-19 97.8 53 84.9
Nitab4.5_0001761g0150 Nicotiana tabacum HOM05D008037 ORTHO05D004271 1.9e-17 92.8 52 78.8
Peaxi162Scf00080g00519 Petunia axillaris HOM05D001966 ORTHO05D010055 1.9e-17 92.8 111 47.7
DCAR_001145 Daucus carota HOM05D001966 ORTHO05D010055 4.2e-17 91.7 48 85.4
Solyc11g021160.1 Solanum lycopersicum HOM05D001966 ORTHO05D010055 4.2e-17 91.7 49 83.7
Nitab4.5_0004841g0100 Nicotiana tabacum HOM05D008016 ORTHO05D010055 9.4e-17 90.5 67 71.6
Sopen10g016570 Solanum pennellii HOM05D008037 ORTHO05D004271 9.4e-17 90.5 55 78.2
CAN.G1298.21 Capsicum annuum HOM05D000445 ORTHO05D000314 4.6e-16 88.2 53 77.4
arahy.Tifrunner.gnm1.ann1.FTZ997 Arachis hypogaea HOM05D000445 ORTHO05D000314 1.7e-13 79.7 66 66.7
QL93p0968_0000 Quercus lobata HOM05D008259 ORTHO05D010055 1.7e-13 79.7 62 66.1
CAN.G1185.5 Capsicum annuum HOM05D001070 ORTHO05D010055 6.9e-12 74.3 48 70.8
SHI27036 Sapria himalayana HOM05D001966 ORTHO05D010986 1.2e-11 73.6 40 80.0
Lsat_1_v5_gn_2_20541 Lactuca sativa HOM05D008354 ORTHO05D010055 4.5e-11 71.6 43 83.7
Lsat_1_v5_gn_3_108780 Lactuca sativa HOM05D008354 ORTHO05D010055 4.5e-11 71.6 43 83.7
Lsat_1_v5_gn_3_110420 Lactuca sativa HOM05D008354 ORTHO05D010055 4.5e-11 71.6 43 83.7
Lsat_1_v5_gn_4_147820 Lactuca sativa HOM05D008354 ORTHO05D010055 4.5e-11 71.6 43 83.7
Lsat_1_v5_gn_5_181860 Lactuca sativa HOM05D008354 ORTHO05D010055 4.5e-11 71.6 43 83.7
Nitab4.5_0002404g0010 Nicotiana tabacum HOM05D008354 ORTHO05D010055 4.5e-11 71.6 43 83.7
PGSC0003DMG400029000 Solanum tuberosum HOM05D008354 ORTHO05D010055 4.5e-11 71.6 43 83.7
PGSC0003DMG401008784 Solanum tuberosum HOM05D008354 ORTHO05D010055 4.5e-11 71.6 43 83.7
Migut.D01398 Erythranthe guttata HOM05D008354 ORTHO05D010055 5.9e-11 71.2 37 91.9
Oeu040832.1 Olea europaea HOM05D008354 ORTHO05D010055 5.9e-11 71.2 41 85.4
Sc02g0004570 Simmondsia chinensis HOM05D008037 ORTHO05D004271 7.7e-11 70.9 44 72.7
Potri.013G092500 Populus trichocarpa HOM05D008354 ORTHO05D010055 1.7e-10 69.7 43 81.4
HPP92_028386 Vanilla planifolia HOM05D009726 ORTHO05D010055 2.9e-10 68.9 38 81.6
BcaB02g11353 Brassica carinata HOM05D007952 ORTHO05D009823 5.0e-10 68.2 83 50.6
BcaNung07085 Brassica carinata HOM05D001966 ORTHO05D010449 5.0e-10 68.2 83 50.6
BolSC35t60714H Brassica oleracea HOM05D008016 ORTHO05D004271 5.0e-10 68.2 84 47.6
BraSC103t45496Z Brassica rapa HOM05D008016 ORTHO05D004271 5.0e-10 68.2 84 47.6
CAN.G82.6 Capsicum annuum HOM05D000011 ORTHO05D000018 5.0e-10 68.2 36 86.1
arahy.Tifrunner.gnm1.ann1.V91BB6 Arachis hypogaea HOM05D008354 ORTHO05D010055 6.5e-10 67.8 41 80.5
Sed0006309 Sechium edule HOM05D010190 ORTHO05D009823 6.5e-10 67.8 38 78.9
arahy.Tifrunner.gnm1.ann1.CV8HTS Arachis hypogaea HOM05D008354 ORTHO05D010055 8.5e-10 67.4 46 73.9
Aqoxy38s013 Aquilegia oxysepala HOM05D008354 ORTHO05D010055 1.4e-09 66.6 36 88.9
arahy.Tifrunner.gnm1.ann1.9FU6Q4 Arachis hypogaea HOM05D009726 ORTHO05D010588 1.4e-09 66.6 85 37.6
arahy.Tifrunner.gnm1.ann1.7D98FQ Arachis hypogaea HOM05D000963 ORTHO05D004715 1.9e-09 66.2 38 76.3
arahy.Tifrunner.gnm1.ann1.U095GY Arachis hypogaea HOM05D000963 ORTHO05D004715 1.9e-09 66.2 38 76.3
Oeu022559.1 Olea europaea HOM05D001966 ORTHO05D011119 2.5e-09 65.9 78 47.4
DCAR_024575 Daucus carota HOM05D008354 ORTHO05D010055 3.2e-09 65.5 40 80.0
DCAR_031655 Daucus carota HOM05D008354 ORTHO05D010055 3.2e-09 65.5 40 80.0
BolSC44t60832H Brassica oleracea HOM05D008016 ORTHO05D010588 5.5e-09 64.7 88 44.3
arahy.Tifrunner.gnm1.ann1.FN06MZ Arachis hypogaea HOM05D000533 ORTHO05D006151 7.2e-09 64.3 36 77.8
CAN.G947.16 Capsicum annuum HOM05D001697 ORTHO05D001905 1.6e-08 63.2 40 80.0
arahy.Tifrunner.gnm1.ann1.M1FG7L Arachis hypogaea HOM05D008354 ORTHO05D010055 2.1e-08 62.8 46 65.2
arahy.Tifrunner.gnm1.ann1.PRQI1Y Arachis hypogaea HOM05D008016 ORTHO05D010588 3.6e-08 62.0 78 46.2
ClCG11G009640 Citrullus lanatus HOM05D008354 ORTHO05D010055 3.6e-08 62.0 39 79.5
MELO3C028020.2 Cucumis melo HOM05D008354 ORTHO05D010055 3.6e-08 62.0 39 79.5
Sed0000469 Sechium edule HOM05D010190 ORTHO05D009823 3.6e-08 62.0 39 74.4
Glyma.14G158500 Glycine max HOM05D008354 ORTHO05D010055 4.7e-08 61.6 46 67.4
LjContig00315g0013064 Lotus japonicus HOM05D008354 ORTHO05D010055 7.9e-08 60.8 41 75.6
LjContig00439g0006222 Lotus japonicus HOM05D008354 ORTHO05D010055 7.9e-08 60.8 41 75.6
LjContig00446g0002728 Lotus japonicus HOM05D008354 ORTHO05D010055 7.9e-08 60.8 41 75.6
Nitab4.5_0007400g0100 Nicotiana tabacum HOM05D008016 ORTHO05D004271 1.4e-07 60.1 30 83.3
Psat5g119000 Pisum sativum HOM05D009726 ORTHO05D010588 1.4e-07 60.1 41 65.9
LjContig00489g0002748 Lotus japonicus HOM05D008354 ORTHO05D010055 1.8e-07 59.7 29 93.1
vmacro12501 Vaccinium macrocarpon HOM05D001824 ORTHO05D010055 1.8e-07 59.7 34 79.4
VMungo1233G0001 Vigna mungo HOM05D001966 ORTHO05D010986 1.8e-07 59.7 35 85.7
arahy.Tifrunner.gnm1.ann1.CK4XFX Arachis hypogaea HOM05D009726 ORTHO05D010055 2.3e-07 59.3 32 81.2
EL10Ac6g14593 Beta vulgaris HOM05D001966 ORTHO05D010055 2.3e-07 59.3 29 86.2
arahy.Tifrunner.gnm1.ann1.R58SNE Arachis hypogaea HOM05D008016 ORTHO05D010055 3.0e-07 58.9 54 57.4
Migut.D01380 Erythranthe guttata HOM05D008354 ORTHO05D010055 3.0e-07 58.9 60 51.7
Nitab4.5_0005831g0120 Nicotiana tabacum HOM05D008354 ORTHO05D010055 1.1e-06 57.0 38 73.7
arahy.Tifrunner.gnm1.ann1.V4KXIX Arachis hypogaea HOM05D009726 ORTHO05D010588 1.5e-06 56.6 38 65.8
EL10Ac5g12141 Beta vulgaris HOM05D001716 ORTHO05D004234 1.5e-06 56.6 28 85.7
Nitab4.5_0005831g0030 Nicotiana tabacum HOM05D001090 ORTHO05D006167 1.5e-06 56.6 44 61.4
arahy.Tifrunner.gnm1.ann1.JWI1UU Arachis hypogaea HOM05D009726 ORTHO05D010588 2.6e-06 55.8 41 61.0
BolSC49t61153H Brassica oleracea HOM05D008016 ORTHO05D010588 2.6e-06 55.8 84 42.9
MELO3C000043.2 Cucumis melo HOM05D008354 ORTHO05D010055 2.6e-06 55.8 32 84.4
Thhalv10029308m.g Eutrema salsugineum HOM05D008354 ORTHO05D010055 5.7e-06 54.7 43 69.8


User provided reference genes

Program Settings