Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0006476g0030 Nicotiana tabacum HOM05D008490 ORTHO05D010725 7.2e-55 216.9 99 100.0
Peaxi162Scf00477g00823 Petunia axillaris HOM05D008490 ORTHO05D010725 8.8e-45 183.3 96 89.6
Lsat_1_v5_gn_5_16200 Lactuca sativa HOM05D005210 ORTHO05D010286 5.0e-40 167.5 100 80.0
ECA039G0024 Erigeron canadensis HOM05D008490 ORTHO05D010725 3.6e-38 161.4 92 84.8
Lsat_1_v5_gn_5_16680 Lactuca sativa HOM05D008490 ORTHO05D010725 4.9e-35 151.0 74 91.9
MBI05_g05344_MAGBIO Magnolia biondii HOM05D008490 ORTHO05D010725 4.9e-35 151.0 70 95.7
CSS0048923 Camellia sinensis var. sinensis HOM05D008490 ORTHO05D010725 1.8e-34 149.1 89 82.0
Sc14g0003240 Simmondsia chinensis HOM05D008490 ORTHO05D010725 3.1e-34 148.3 90 77.8
TPR.G7850 Trifolium pratense HOM05D008490 ORTHO05D010725 7.0e-34 147.1 74 89.2
Sed0016837 Sechium edule HOM05D008490 ORTHO05D010725 1.2e-33 146.4 69 95.7
Actinidia34838 Actinidia chinensis HOM05D008490 ORTHO05D010725 2.7e-33 145.2 90 76.7
MBI16_g26183_MAGBIO Magnolia biondii HOM05D001356 ORTHO05D008843 5.9e-33 144.1 74 87.8
arahy.Tifrunner.gnm1.ann1.BZJ16Q Arachis hypogaea HOM05D008490 ORTHO05D010725 2.9e-32 141.7 68 94.1
arahy.Tifrunner.gnm1.ann1.GRFW67 Arachis hypogaea HOM05D008490 ORTHO05D010725 2.9e-32 141.7 68 94.1
arahy.Tifrunner.gnm1.ann1.PAX1AS Arachis hypogaea HOM05D008490 ORTHO05D010725 2.9e-32 141.7 68 94.1
Lj5g0013341 Lotus japonicus HOM05D008490 ORTHO05D010725 2.9e-32 141.7 68 94.1
LjContig00439g0024223 Lotus japonicus HOM05D008490 ORTHO05D010725 2.9e-32 141.7 68 94.1
VMungo0329G0002 Vigna mungo HOM05D008490 ORTHO05D010725 2.9e-32 141.7 68 94.1
Psat4g185480 Pisum sativum HOM05D008490 ORTHO05D010725 8.6e-32 140.2 68 92.6
Lj5g0002635 Lotus japonicus HOM05D008490 ORTHO05D010725 3.3e-31 138.3 68 92.6
Sed0023681 Sechium edule HOM05D008490 ORTHO05D010725 7.3e-31 137.1 63 98.4
unitig_87.g27953 Utricularia gibba HOM05D008490 ORTHO05D010725 6.8e-29 130.6 85 72.9
Sopen00g006810 Solanum pennellii HOM05D008490 ORTHO05D010725 2.0e-28 129.0 68 86.8
PGSC0003DMG400004057 Solanum tuberosum HOM05D008490 ORTHO05D010725 3.4e-28 128.3 62 93.5
Nitab4.5_0000172g1820 Nicotiana tabacum HOM05D008490 ORTHO05D010725 1.1e-26 123.2 68 85.3
MBI14_g38259_MAGBIO Magnolia biondii HOM05D002660 ORTHO05D010725 5.9e-25 117.5 56 92.9
CSS0002229 Camellia sinensis var. sinensis HOM05D008490 ORTHO05D010725 7.8e-25 117.1 95 64.2
Nitab4.5_0005831g0100 Nicotiana tabacum HOM05D008490 ORTHO05D010725 7.8e-25 117.1 62 80.6
Nitab4.5_0004632g0020 Nicotiana tabacum HOM05D008490 ORTHO05D010725 4.3e-23 111.3 97 54.6
Nn2g14502 Nelumbo nucifera HOM05D008490 ORTHO05D010725 2.9e-19 98.6 46 91.3
Phvul.002G106400 Phaseolus vulgaris HOM05D008490 ORTHO05D010725 9.2e-18 93.6 49 81.6
Nitab4.5_0000127g0060 Nicotiana tabacum HOM05D008490 ORTHO05D010725 2.5e-15 85.5 70 60.0
Sc25g0002270 Simmondsia chinensis HOM05D008490 ORTHO05D010725 4.3e-15 84.7 42 90.5
Hma1.2p1_0435F.1_g152380 Hydrangea macrophylla HOM05D008490 ORTHO05D010725 4.9e-11 71.2 34 97.1
CBR_g3174 Chara braunii HOM05D008490 ORTHO05D010725 7.1e-10 67.4 39 82.1
Sc11g0004340 Simmondsia chinensis HOM05D008490 ORTHO05D010725 5.6e-07 57.8 31 87.1
SGA_v2.0_scaffold245G44789 Striga asiatica HOM05D008490 ORTHO05D010725 2.1e-06 55.8 41 65.9


User provided reference genes

Program Settings