Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0006473g0040 Nicotiana tabacum HOM05D002833 ORTHO05D000001 8.3e-82 307.0 155 100.0
Nitab4.5_0003362g0070 Nicotiana tabacum HOM05D002833 ORTHO05D000001 1.2e-43 180.3 217 50.7
Nitab4.5_0000871g0050 Nicotiana tabacum HOM05D002833 ORTHO05D003210 4.6e-40 168.3 239 45.6
Nitab4.5_0003766g0020 Nicotiana tabacum HOM05D002833 ORTHO05D000001 7.8e-40 167.5 218 49.1
Nitab4.5_0000305g0090 Nicotiana tabacum HOM05D002833 ORTHO05D000001 2.1e-37 159.5 237 43.5
Nitab4.5_0000164g0090 Nicotiana tabacum HOM05D002833 ORTHO05D003210 2.6e-35 152.5 240 42.5
Nitab4.5_0004147g0060 Nicotiana tabacum HOM05D002833 ORTHO05D000001 5.8e-35 151.4 192 49.5
Nitab4.5_0000498g0210 Nicotiana tabacum HOM05D002833 ORTHO05D000001 5.4e-33 144.8 216 41.7
Peaxi162Scf00202g00046 Petunia axillaris HOM05D002833 ORTHO05D003210 9.3e-33 144.1 218 42.7
Nitab4.5_0000061g0370 Nicotiana tabacum HOM05D002833 ORTHO05D000001 7.9e-32 141.0 225 42.7
Peaxi162Scf01254g00010 Petunia axillaris HOM05D015337 ORTHO05D019322 5.3e-28 128.3 85 74.1
Peaxi162Scf00023g01122 Petunia axillaris HOM05D010760 ORTHO05D000001 4.5e-27 125.2 172 46.5
Nitab4.5_0005846g0030 Nicotiana tabacum HOM05D002833 ORTHO05D003210 5.8e-27 124.8 198 41.9
Peaxi162Scf00460g00045 Petunia axillaris HOM05D002833 ORTHO05D000001 3.8e-26 122.1 202 39.6
Nitab4.5_0003319g0020 Nicotiana tabacum HOM05D002833 ORTHO05D000001 1.9e-25 119.8 213 41.8
Nitab4.5_0012974g0020 Nicotiana tabacum HOM05D002833 ORTHO05D000001 3.2e-25 119.0 74 73.0
Nitab4.5_0007395g0030 Nicotiana tabacum HOM05D002833 ORTHO05D000001 9.3e-25 117.5 85 67.1
Nitab4.5_0003230g0060 Nicotiana tabacum HOM05D002833 ORTHO05D000001 1.2e-24 117.1 85 65.9
Nitab4.5_0007140g0030 Nicotiana tabacum HOM05D010760 ORTHO05D000001 4.6e-24 115.2 193 42.0
Peaxi162Scf00019g00041 Petunia axillaris HOM05D002833 ORTHO05D000001 1.1e-22 110.5 211 38.4
Nitab4.5_0000523g0100 Nicotiana tabacum HOM05D002833 ORTHO05D000001 1.6e-21 106.7 71 73.2
Nitab4.5_0009589g0010 Nicotiana tabacum HOM05D010760 ORTHO05D003210 8.2e-13 77.8 69 63.8
Nitab4.5_0006115g0020 Nicotiana tabacum HOM05D002833 ORTHO05D000001 2.4e-12 76.3 85 49.4
Peaxi162Scf00031g00297 Petunia axillaris HOM05D010760 ORTHO05D003210 5.3e-12 75.1 116 44.8
Nitab4.5_0002286g0060 Nicotiana tabacum HOM05D002833 ORTHO05D000001 1.2e-11 73.9 126 40.5
Nitab4.5_0002811g0040 Nicotiana tabacum HOM05D002833 ORTHO05D000001 1.0e-10 70.9 57 64.9
Peaxi162Scf00059g00185 Petunia axillaris HOM05D002833 ORTHO05D000001 3.2e-09 65.9 171 33.3
Rhsim05G0196600 Rhododendron simsii HOM05D000002 ORTHO05D000001 4.2e-09 65.5 83 37.3
VMungo0251G0530 Vigna mungo HOM05D000002 ORTHO05D037837 4.2e-09 65.5 111 33.3
Rhsim09G0019300 Rhododendron simsii HOM05D000002 ORTHO05D000001 7.2e-09 64.7 115 36.5
Atru.chr9.1635 Acer truncatum HOM05D000002 ORTHO05D000001 1.6e-08 63.5 84 40.5
CSS0027920 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.7e-08 62.8 84 31.0
Nitab4.5_0000205g0030 Nicotiana tabacum HOM05D002833 ORTHO05D000001 2.7e-08 62.8 60 58.3
vmacro02264 Vaccinium macrocarpon HOM05D006341 ORTHO05D000377 2.7e-08 62.8 83 38.6
MD12G1254800 Malus domestica HOM05D002861 ORTHO05D003104 3.6e-08 62.4 89 33.7
Atru.chr2.2995 Acer truncatum HOM05D000002 ORTHO05D000001 4.6e-08 62.0 89 38.2
TAR492G0001 Trochodendron aralioides HOM05D000002 ORTHO05D000001 4.6e-08 62.0 82 36.6
MELO3C013392.2 Cucumis melo HOM05D000002 ORTHO05D000001 6.1e-08 61.6 90 36.7
Atru.chr4.967 Acer truncatum HOM05D000002 ORTHO05D000001 7.9e-08 61.2 87 39.1
CSS0034935 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 7.9e-08 61.2 84 33.3
Psat0s3652g0040 Pisum sativum HOM05D000002 ORTHO05D010776 7.9e-08 61.2 133 30.8
TAR720G0002 Trochodendron aralioides HOM05D000002 ORTHO05D000001 7.9e-08 61.2 82 42.7
Prupe.2G201300 Prunus persica HOM05D000010 ORTHO05D000001 1.0e-07 60.8 87 35.6
PSO339G0376 Papaver somniferum HOM05D000002 ORTHO05D000001 1.8e-07 60.1 156 31.4
CSS0021158 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.3e-07 59.7 173 28.9
CAN.G107.1 Capsicum annuum HOM05D000001 ORTHO05D015889 2.3e-07 59.7 64 50.0
Hma1.2p1_2812F.1_g328890 Hydrangea macrophylla HOM05D000097 ORTHO05D000041 2.3e-07 59.7 91 29.7
Rhsim07G0051100 Rhododendron simsii HOM05D000002 ORTHO05D000001 2.3e-07 59.7 84 32.1
CSS0008547 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.9e-07 58.9 132 25.8
CSS0020274 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.9e-07 58.9 83 30.1
CSS0041353 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.9e-07 58.9 84 29.8
RcHm_v2.0_Chr2g0129181 Rosa chinensis HOM05D000002 ORTHO05D000001 3.9e-07 58.9 77 33.8
CSS0041837 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 5.1e-07 58.5 132 25.8
MD00G1024600 Malus domestica HOM05D000002 ORTHO05D000001 5.1e-07 58.5 89 33.7
CSS0017698 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 6.7e-07 58.2 132 25.8
CSS0021283 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 6.7e-07 58.2 94 30.9
Hma1.2p1_1397F.1_g280780 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 6.7e-07 58.2 82 32.9
PGR031G2939 Punica granatum HOM05D027407 ORTHO05D000001 6.7e-07 58.2 72 36.1
RcHm_v2.0_Chr1g0366871 Rosa chinensis HOM05D000062 ORTHO05D000043 6.7e-07 58.2 89 36.0
GSVIVG01034817001 Vitis vinifera HOM05D000080 ORTHO05D000053 6.7e-07 58.2 85 36.5
Oeu040352.1 Olea europaea HOM05D001270 ORTHO05D001099 8.8e-07 57.8 99 31.3
CSS0007133 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.1e-06 57.4 94 30.9
CSS0021297 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.1e-06 57.4 84 29.8
CSS0025925 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.1e-06 57.4 74 31.1
Sabra01G0117000 Salix brachista HOM05D000002 ORTHO05D000001 1.1e-06 57.4 85 29.4
Sabra11G0010600 Salix brachista HOM05D000002 ORTHO05D000001 1.1e-06 57.4 148 29.7
TAR042G0001 Trochodendron aralioides HOM05D000002 ORTHO05D000001 1.1e-06 57.4 73 38.4
CSS0020834 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.5e-06 57.0 116 30.2
CSS0025666 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.5e-06 57.0 85 32.9
CsaV3_7G000640 Cucumis sativus L. HOM05D000002 ORTHO05D000001 1.5e-06 57.0 90 36.7
RcHm_v2.0_Chr1g0326351 Rosa chinensis HOM05D000067 ORTHO05D000097 1.5e-06 57.0 77 32.5
RcHm_v2.0_Chr2g0156571 Rosa chinensis HOM05D000002 ORTHO05D000001 1.5e-06 57.0 89 34.8
TAR084G0004 Trochodendron aralioides HOM05D001435 ORTHO05D001304 1.5e-06 57.0 82 37.8
TAR218G0001 Trochodendron aralioides HOM05D000002 ORTHO05D000001 1.5e-06 57.0 107 31.8
Migut.G00019 Erythranthe guttata HOM05D000002 ORTHO05D000001 2.0e-06 56.6 77 37.7
RcHm_v2.0_Chr2g0174291 Rosa chinensis HOM05D000002 ORTHO05D000001 2.0e-06 56.6 120 34.2
RcHm_v2.0_Chr3g0465981 Rosa chinensis HOM05D000002 ORTHO05D000001 2.0e-06 56.6 77 32.5
CSS0034832 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.5e-06 56.2 84 32.1
TAR180G0002 Trochodendron aralioides HOM05D000002 ORTHO05D000001 2.5e-06 56.2 92 34.8
Atru.chr4.210 Acer truncatum HOM05D000002 ORTHO05D000001 3.3e-06 55.8 81 33.3
MD12G1185900 Malus domestica HOM05D000002 ORTHO05D000001 3.3e-06 55.8 87 32.2
FvH4_3g17262 Fragaria vesca HOM05D000002 ORTHO05D000001 4.3e-06 55.5 91 33.0
FvH4_5g09401 Fragaria vesca HOM05D000002 ORTHO05D000001 4.3e-06 55.5 78 35.9
MD13G1099200 Malus domestica HOM05D000002 ORTHO05D000001 4.3e-06 55.5 84 31.0
MD17G1248200 Malus domestica HOM05D000002 ORTHO05D000001 4.3e-06 55.5 85 37.6
PSO104G0170 Papaver somniferum HOM05D003193 ORTHO05D000001 4.3e-06 55.5 73 32.9
Rhsim07G0113600 Rhododendron simsii HOM05D009466 ORTHO05D000001 4.3e-06 55.5 91 34.1
Solyc06g010275.1 Solanum lycopersicum HOM05D004255 ORTHO05D004815 4.3e-06 55.5 72 47.2
Rhsim05G0076500 Rhododendron simsii HOM05D000002 ORTHO05D000001 5.7e-06 55.1 91 34.1
Sed0010177 Sechium edule HOM05D000002 ORTHO05D000001 5.7e-06 55.1 79 32.9
CSS0045443 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 7.4e-06 54.7 83 31.3
MD05G1333300 Malus domestica HOM05D000002 ORTHO05D000001 7.4e-06 54.7 120 28.3
MD12G1175300 Malus domestica HOM05D000002 ORTHO05D000001 7.4e-06 54.7 89 32.6
FvH4_2g26161 Fragaria vesca HOM05D000083 ORTHO05D001732 9.7e-06 54.3 91 31.9
Hma1.2p1_1458F.1_g284730 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 9.7e-06 54.3 83 36.1
TAR722G0003 Trochodendron aralioides HOM05D000002 ORTHO05D000001 9.7e-06 54.3 83 37.3


User provided reference genes

Program Settings