Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0006448g0040 Nicotiana tabacum HOM05D013183 ORTHO05D009954 3.3e-78 295.0 155 100.0
Nitab4.5_0000123g0160 Nicotiana tabacum HOM05D013183 ORTHO05D009954 1.0e-76 290.0 155 98.1
Nitab4.5_0000123g0140 Nicotiana tabacum HOM05D031502 ORTHO05D009954 5.5e-25 118.2 146 47.9
Dinv06965 Davidia involucrata HOM05D008071 ORTHO05D009954 3.0e-23 112.5 128 48.4
Nitab4.5_0006448g0020 Nicotiana tabacum HOM05D031502 ORTHO05D009954 5.7e-22 108.2 146 45.2
Nitab4.5_0000511g0080 Nicotiana tabacum HOM05D031502 ORTHO05D009954 1.5e-19 100.1 146 43.8
Nitab4.5_0006448g0010 Nicotiana tabacum HOM05D031502 ORTHO05D009954 8.4e-18 94.4 129 47.3
BcaC03g14931 Brassica carinata HOM05D008071 ORTHO05D009954 2.5e-17 92.8 141 40.4
C02p24260 Brassica napus HOM05D008071 ORTHO05D009954 2.5e-17 92.8 141 40.4
BolC2t08535H Brassica oleracea HOM05D008071 ORTHO05D009954 2.5e-17 92.8 141 40.4
BraA02t06549Z Brassica rapa HOM05D008071 ORTHO05D009954 2.5e-17 92.8 141 40.4
Sp5g23220 Schrenkiella parvula HOM05D008071 ORTHO05D009954 2.5e-17 92.8 141 40.4
Rhsim03G0040600 Rhododendron simsii HOM05D008071 ORTHO05D009954 4.2e-17 92.0 132 38.6
PGSC0003DMG400026885 Solanum tuberosum HOM05D013183 ORTHO05D018130 5.5e-17 91.7 118 41.5
QL07p015274 Quercus lobata HOM05D008071 ORTHO05D009954 1.2e-16 90.5 118 44.1
A02p14820 Brassica napus HOM05D008071 ORTHO05D009954 2.1e-16 89.7 141 39.7
BcaB05g24356 Brassica carinata HOM05D008071 ORTHO05D009954 6.1e-16 88.2 141 37.6
Migut.J01571 Erythranthe guttata HOM05D015569 ORTHO05D017481 6.1e-16 88.2 156 37.2
AL1G40040 Arabidopsis lyrata HOM05D008071 ORTHO05D009954 1.8e-15 86.7 140 39.3
THA.LOC104827706 Tarenaya hassleriana HOM05D008071 ORTHO05D009954 3.9e-15 85.5 142 36.6
Thhalv10009029m.g Eutrema salsugineum HOM05D008071 ORTHO05D009954 8.7e-15 84.3 140 34.3
Aa31LG7G9180 Aethionema arabicum HOM05D008071 ORTHO05D009954 2.5e-14 82.8 138 35.5
Solyc09g072770.1 Solanum lycopersicum HOM05D013183 ORTHO05D018130 3.3e-14 82.4 119 37.8
Carub.0001s2524 Capsella rubella HOM05D008071 ORTHO05D009954 4.3e-14 82.0 140 35.0
Carub.0001s2523 Capsella rubella HOM05D008071 ORTHO05D009954 5.7e-14 81.6 140 34.3
Dinv13279 Davidia involucrata HOM05D008071 ORTHO05D009954 1.6e-13 80.1 149 35.6
DCAR_008209 Daucus carota HOM05D014896 ORTHO05D016270 2.8e-13 79.3 154 34.4
PGSC0003DMG400003787 Solanum tuberosum HOM05D013183 ORTHO05D018130 4.8e-13 78.6 117 41.9
PGSC0003DMG400003788 Solanum tuberosum HOM05D013183 ORTHO05D018130 4.8e-13 78.6 117 41.9
THA.LOC104827708 Tarenaya hassleriana HOM05D008071 ORTHO05D009954 1.8e-12 76.6 142 36.6
Sopen09g028540 Solanum pennellii HOM05D013183 ORTHO05D018130 2.4e-12 76.3 119 36.1
BcaC01g01683 Brassica carinata HOM05D008071 ORTHO05D009954 4.5e-11 72.0 124 30.6
BolC3t19602H Brassica oleracea HOM05D008071 ORTHO05D009954 4.5e-11 72.0 124 30.6
PGSC0003DMG400003851 Solanum tuberosum HOM05D013183 ORTHO05D018130 1.0e-10 70.9 119 38.7
BraA08t34634Z Brassica rapa HOM05D008071 ORTHO05D009954 1.3e-10 70.5 124 30.6
DCAR_008211 Daucus carota HOM05D014896 ORTHO05D016270 2.9e-10 69.3 118 38.1
CANSAT78G1840 Cannabis sativa HOM05D008071 ORTHO05D009954 5.0e-10 68.6 149 34.9
Sp2g26770 Schrenkiella parvula HOM05D008071 ORTHO05D009954 5.0e-10 68.6 119 31.1
MSTRG.6279 Avicennia marina HOM05D015569 ORTHO05D017481 8.5e-10 67.8 148 38.5
DCAR_008214 Daucus carota HOM05D014896 ORTHO05D016270 8.5e-10 67.8 159 34.0
Solyc09g072753.1 Solanum lycopersicum HOM05D013183 ORTHO05D018130 1.4e-09 67.0 114 36.8
Eucgr.K01697 Eucalyptus grandis HOM05D008071 ORTHO05D009954 1.9e-09 66.6 132 34.1
CARHR136500 Cardamine hirsuta HOM05D008071 ORTHO05D009954 2.5e-09 66.2 124 33.9
ATR0006G003 Amborella trichopoda HOM05D008071 ORTHO05D009954 3.2e-09 65.9 131 35.1
DCAR_008212 Daucus carota HOM05D014896 ORTHO05D016270 3.2e-09 65.9 156 31.4
Carub.0001s2525 Capsella rubella HOM05D008071 ORTHO05D009954 4.2e-09 65.5 130 28.5
DCAR_008210 Daucus carota HOM05D014896 ORTHO05D016270 4.2e-09 65.5 160 31.2
DCAR_008213 Daucus carota HOM05D014896 ORTHO05D016270 4.2e-09 65.5 172 33.7
SGA_v2.0_scaffold66G22322 Striga asiatica HOM05D015569 ORTHO05D017481 4.2e-09 65.5 156 37.2
SGA_v2.0_scaffold68G22909 Striga asiatica HOM05D015569 ORTHO05D017481 4.2e-09 65.5 160 35.6
DCAR_008215 Daucus carota HOM05D014896 ORTHO05D016270 7.2e-09 64.7 157 31.2
Eucgr.K01698 Eucalyptus grandis HOM05D008071 ORTHO05D009954 1.2e-08 63.9 126 33.3
MBI18_g24867_MAGBIO Magnolia biondii HOM05D003565 ORTHO05D003943 2.1e-08 63.2 152 28.3
PGSC0003DMG400034108 Solanum tuberosum HOM05D013183 ORTHO05D397641 2.7e-08 62.8 142 33.1
AL2G27010 Arabidopsis lyrata HOM05D008071 ORTHO05D009954 2.3e-07 59.7 77 36.4
CARHR026190 Cardamine hirsuta HOM05D008071 ORTHO05D009954 2.3e-07 59.7 129 27.9
CARHR026210 Cardamine hirsuta HOM05D008071 ORTHO05D009954 2.3e-07 59.7 129 26.4
PGSC0003DMG400024283 Solanum tuberosum HOM05D013183 ORTHO05D018130 3.0e-07 59.3 150 32.0
BcaB03g12034 Brassica carinata HOM05D008071 ORTHO05D009954 5.1e-07 58.5 129 27.1
HanXRQChr13g0420001 Helianthus annuus HOM05D003565 ORTHO05D003943 8.8e-07 57.8 158 32.9
SGA_v2.0_scaffold106G30581 Striga asiatica HOM05D015569 ORTHO05D017481 1.5e-06 57.0 125 34.4
SGA_v2.0_scaffold66G22324 Striga asiatica HOM05D015569 ORTHO05D017481 4.3e-06 55.5 108 33.3
Sp1g22940 Schrenkiella parvula HOM05D008071 ORTHO05D009954 5.7e-06 55.1 121 27.3
BcaB03g14033 Brassica carinata HOM05D008071 ORTHO05D009954 7.4e-06 54.7 125 28.8


User provided reference genes

Program Settings