Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0006435g0010 Nicotiana tabacum HOM05D008749 ORTHO05D010891 2.0e-61 239.2 145 100.0
Dinv21615 Davidia involucrata HOM05D000220 ORTHO05D010891 1.2e-18 97.1 72 63.9
Dinv28567 Davidia involucrata HOM05D008749 ORTHO05D010891 8.7e-17 90.9 68 64.7
EL10Ac5g13045 Beta vulgaris HOM05D008749 ORTHO05D010891 3.7e-15 85.5 76 52.6
SGA_v2.0_scaffold120G32865 Striga asiatica HOM05D008749 ORTHO05D010891 4.8e-15 85.1 62 64.5
FAN18G0269 Fragaria x ananassa HOM05D008749 ORTHO05D010891 1.2e-13 80.5 71 56.3
Dinv21614 Davidia involucrata HOM05D008749 ORTHO05D010891 2.0e-13 79.7 75 56.0
HanXRQChr17g0549911 Helianthus annuus HOM05D008749 ORTHO05D010891 2.6e-13 79.3 72 54.2
AT4G22463 Arabidopsis thaliana HOM05D008749 ORTHO05D010891 2.2e-12 76.3 75 50.7
Ah.02g116800 Amaranthus hybridus HOM05D008749 ORTHO05D010891 5.0e-12 75.1 58 58.6
Eucgr.E00449 Eucalyptus grandis HOM05D008749 ORTHO05D010891 1.1e-11 73.9 70 55.7
Atru.chr9.1350 Acer truncatum HOM05D008749 ORTHO05D010891 1.4e-11 73.6 74 52.7
Zm00001eb000430 Zea mays HOM05D008749 ORTHO05D010891 3.2e-11 72.4 65 55.4
MBI04_g32486_MAGBIO Magnolia biondii HOM05D008749 ORTHO05D010891 9.4e-11 70.9 62 61.3
ECA238G3377 Erigeron canadensis HOM05D008749 ORTHO05D010891 2.1e-10 69.7 52 57.7
A01p13770 Brassica napus HOM05D008749 ORTHO05D010891 2.7e-10 69.3 76 47.4
Lj8C259T8 Lonicera japonica HOM05D008749 ORTHO05D010891 3.6e-10 68.9 55 61.8
HanXRQChr17g0549861 Helianthus annuus HOM05D008749 ORTHO05D010891 1.4e-09 67.0 62 53.2
DCAR_002361 Daucus carota HOM05D008749 ORTHO05D010891 3.0e-09 65.9 65 49.2
Nn1g01060 Nelumbo nucifera HOM05D008749 ORTHO05D010891 3.9e-09 65.5 60 58.3
Nn6g34014 Nelumbo nucifera HOM05D008749 ORTHO05D010891 3.9e-09 65.5 65 50.8
Nn6g34013 Nelumbo nucifera HOM05D008749 ORTHO05D010891 6.7e-09 64.7 60 56.7
TAR375G1081 Trochodendron aralioides HOM05D008749 ORTHO05D010891 6.7e-09 64.7 52 59.6
Lsat_1_v5_gn_6_2881 Lactuca sativa HOM05D008749 ORTHO05D010891 8.8e-09 64.3 75 45.3
Cc06_g22410 Coffea canephora HOM05D008749 ORTHO05D010891 1.5e-08 63.5 75 46.7
ECA247G1192 Erigeron canadensis HOM05D008749 ORTHO05D010891 2.0e-08 63.2 52 53.8
EL10Ac5g13042 Beta vulgaris HOM05D008749 ORTHO05D010891 5.7e-08 61.6 54 51.9
AT4G00163 Arabidopsis thaliana HOM05D008749 ORTHO05D010891 7.4e-08 61.2 50 60.0
EL10Ac5g13038 Beta vulgaris HOM05D008749 ORTHO05D010891 7.4e-08 61.2 60 50.0
Nn1g01056 Nelumbo nucifera HOM05D008749 ORTHO05D010891 7.4e-08 61.2 59 52.5
AT1G62515 Arabidopsis thaliana HOM05D008749 ORTHO05D010891 1.3e-07 60.5 54 55.6
MBI04_g32487_MAGBIO Magnolia biondii HOM05D008749 ORTHO05D010891 1.3e-07 60.5 55 58.2
Thecc.09G022700 Theobroma cacao HOM05D008749 ORTHO05D010891 1.7e-07 60.1 59 57.6
CAN.G1227.6 Capsicum annuum HOM05D008749 ORTHO05D010891 2.8e-07 59.3 66 50.0
FAN15G1908 Fragaria x ananassa HOM05D019040 ORTHO05D010891 6.3e-07 58.2 61 52.5
Actinidia27461 Actinidia chinensis HOM05D008749 ORTHO05D010891 8.2e-07 57.8 50 56.0


User provided reference genes

Program Settings