Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0006433g0040 Nicotiana tabacum HOM05D001860 ORTHO05D004922 1.4e-122 443.0 222 100.0
Nitab4.5_0001044g0130 Nicotiana tabacum HOM05D001860 ORTHO05D004922 1.1e-116 423.3 222 95.0
CAN.G771.16 Capsicum annuum HOM05D001860 ORTHO05D004922 5.8e-113 411.0 222 89.6
Peaxi162Scf01530g00038 Petunia axillaris HOM05D001860 ORTHO05D004922 7.6e-113 410.6 222 90.5
Solyc06g084030.3 Solanum lycopersicum HOM05D001860 ORTHO05D004922 2.5e-111 405.6 222 89.6
Sopen06g035410 Solanum pennellii HOM05D001860 ORTHO05D004922 2.1e-110 402.5 222 88.7
PGSC0003DMG400020063 Solanum tuberosum HOM05D001860 ORTHO05D004922 4.6e-110 401.4 222 88.3
Hma1.2p1_1079F.1_g254970 Hydrangea macrophylla HOM05D001860 ORTHO05D004922 2.1e-94 349.4 219 76.3
Lj3A1035T53 Lonicera japonica HOM05D001860 ORTHO05D004922 6.7e-93 344.4 219 75.8
Ciclev10032245m.g Citrus clementina HOM05D001860 ORTHO05D004922 4.3e-92 341.7 222 73.9
SalBow2G3316 Salvia bowleyana HOM05D001860 ORTHO05D004922 2.2e-91 339.3 219 72.1
Lsat_1_v5_gn_3_52040 Lactuca sativa HOM05D001860 ORTHO05D004922 4.1e-90 335.1 220 73.6
CSS0022995 Camellia sinensis var. sinensis HOM05D001860 ORTHO05D004922 2.6e-89 332.4 219 70.8
EL10Ac6g13236 Beta vulgaris HOM05D001860 ORTHO05D004922 5.9e-89 331.3 222 73.4
ECA246G1483 Erigeron canadensis HOM05D001860 ORTHO05D004922 1.3e-88 330.1 220 71.8
MSTRG.7790 Avicennia marina HOM05D001860 ORTHO05D004922 5.0e-88 328.2 219 72.1
Actinidia31905 Actinidia chinensis HOM05D001860 ORTHO05D004922 8.5e-88 327.4 218 72.0
Migut.L01273 Erythranthe guttata HOM05D001860 ORTHO05D004922 8.5e-88 327.4 219 73.1
CANSAT64G2732 Cannabis sativa HOM05D001860 ORTHO05D004922 1.9e-87 326.2 218 71.1
HanXRQChr17g0545281 Helianthus annuus HOM05D001860 ORTHO05D004922 1.9e-87 326.2 221 71.9
Manes.05G104100 Manihot esculenta HOM05D001860 ORTHO05D004922 3.2e-87 325.5 220 70.9
RcHm_v2.0_Chr4g0439511 Rosa chinensis HOM05D001860 ORTHO05D004922 5.5e-87 324.7 218 70.6
QL03p068521 Quercus lobata HOM05D001860 ORTHO05D004922 1.6e-86 323.2 219 69.4
Atru.chr11.1760 Acer truncatum HOM05D001860 ORTHO05D004922 2.1e-86 322.8 220 70.9
CiPaw.06G086900 Carya illinoinensis HOM05D001860 ORTHO05D004922 2.1e-86 322.8 218 68.8
TWI31G0055 Tripterygium wilfordii HOM05D001860 ORTHO05D004922 2.1e-86 322.8 222 69.4
Oeu028270.1 Olea europaea HOM05D001860 ORTHO05D004922 3.6e-86 322.0 222 69.8
FAN12G1253 Fragaria x ananassa HOM05D001860 ORTHO05D004922 7.9e-86 320.9 218 70.2
TAR629G3174 Trochodendron aralioides HOM05D001860 ORTHO05D004922 7.9e-86 320.9 219 69.9
Haze_11992 Corylus avellana HOM05D001860 ORTHO05D004922 1.4e-85 320.1 219 69.4
Rhsim12G0064600 Rhododendron simsii HOM05D001860 ORTHO05D004922 1.4e-85 320.1 220 69.5
Cfa008963 Carpinus fangiana HOM05D001860 ORTHO05D004922 1.8e-85 319.7 219 69.4
GSVIVG01019959001 Vitis vinifera HOM05D001860 ORTHO05D004922 3.9e-85 318.5 219 68.5
FAN07G2810 Fragaria x ananassa HOM05D001860 ORTHO05D004922 1.1e-84 317.0 220 68.6
Hund25222 Selenicereus undatus HOM05D001860 ORTHO05D004922 2.0e-84 316.2 222 70.3
Potri.008G088500 Populus trichocarpa HOM05D001860 ORTHO05D004922 2.6e-84 315.8 219 68.5
Thecc.02G343500 Theobroma cacao HOM05D001860 ORTHO05D004922 2.6e-84 315.8 224 68.3
DCAR_026253 Daucus carota HOM05D001016 ORTHO05D003396 3.3e-84 315.5 231 67.1
QL03p068489 Quercus lobata HOM05D001860 ORTHO05D004922 5.7e-84 314.7 213 70.4
QL03p068503 Quercus lobata HOM05D001860 ORTHO05D004922 7.4e-84 314.3 215 69.3
FAN22G1600 Fragaria x ananassa HOM05D001860 ORTHO05D004922 9.7e-84 313.9 218 67.9
Glyma.02G109300 Glycine max HOM05D001860 ORTHO05D004922 9.7e-84 313.9 219 67.1
ClCG05G024130 Citrullus lanatus HOM05D001860 ORTHO05D004922 2.2e-83 312.8 214 69.2
Lj2g0002858 Lotus japonicus HOM05D001860 ORTHO05D004922 6.3e-83 311.2 219 66.7
Nn3g17288 Nelumbo nucifera HOM05D001860 ORTHO05D004922 6.3e-83 311.2 219 67.6
Duzib248G0566 Durio zibethinus HOM05D001860 ORTHO05D004922 2.4e-82 309.3 224 67.0
Sed0020595 Sechium edule HOM05D001860 ORTHO05D004922 4.1e-82 308.5 220 66.4
AUR62032811 Chenopodium quinoa HOM05D001860 ORTHO05D004922 5.3e-82 308.1 222 68.5
MELO3C012111.2 Cucumis melo HOM05D001860 ORTHO05D004922 7.0e-82 307.8 219 65.8
MD16G1070300 Malus domestica HOM05D001860 ORTHO05D004922 7.0e-82 307.8 241 63.1
Phvul.002G083300 Phaseolus vulgaris HOM05D001860 ORTHO05D004922 1.2e-81 307.0 220 65.5
Medtr5g041780 Medicago truncatula HOM05D001860 ORTHO05D004922 2.0e-81 306.2 220 65.5
CsaV3_5G032900 Cucumis sativus L. HOM05D001860 ORTHO05D004922 2.6e-81 305.8 219 65.3
FvH4_4g31120 Fragaria vesca HOM05D001860 ORTHO05D004922 2.6e-81 305.8 218 68.8
Aqoxy5G04114 Aquilegia oxysepala HOM05D001860 ORTHO05D004922 4.5e-81 305.1 219 67.1
CsaV3_5G032890 Cucumis sativus L. HOM05D001860 ORTHO05D004922 5.9e-81 304.7 219 65.3
Cc11_g12800 Coffea canephora HOM05D001860 ORTHO05D004922 7.7e-81 304.3 221 67.4
SGA_v2.0_scaffold172G38956 Striga asiatica HOM05D001860 ORTHO05D004922 1.0e-80 303.9 218 66.1
Gorai.013G087000 Gossypium raimondii HOM05D001860 ORTHO05D004922 1.7e-80 303.1 221 66.1
MBI05_g10765_MAGBIO Magnolia biondii HOM05D001860 ORTHO05D004922 2.9e-80 302.4 218 66.5
Psat2g116760 Pisum sativum HOM05D001860 ORTHO05D004922 1.1e-79 300.4 223 61.9
Ca_04822_v3 Cicer arietinum L. HOM05D001860 ORTHO05D004922 1.9e-79 299.7 220 63.6
vmacro01268 Vaccinium macrocarpon HOM05D001860 ORTHO05D004922 5.5e-79 298.1 257 58.8
Eucgr.B03211 Eucalyptus grandis HOM05D001860 ORTHO05D004922 7.2e-79 297.7 222 63.5
arahy.Tifrunner.gnm1.ann1.0UW6S5 Arachis hypogaea HOM05D001860 ORTHO05D004922 2.1e-78 296.2 220 65.0
COL.COLO4_22943 Corchorus olitorius HOM05D001860 ORTHO05D004922 2.1e-78 296.2 238 62.2
PSO478G0757 Papaver somniferum HOM05D001860 ORTHO05D004922 8.0e-78 294.3 220 65.0
PSO017G0798 Papaver somniferum HOM05D001860 ORTHO05D004922 1.4e-77 293.5 219 64.8
TPR.G36138 Trifolium pratense HOM05D001860 ORTHO05D004922 5.2e-77 291.6 217 63.1
Os02g0744100 Oryza sativa ssp. japonica HOM05D001860 ORTHO05D004922 2.8e-75 285.8 219 60.7
vmacro01267 Vaccinium macrocarpon HOM05D001860 ORTHO05D004922 2.8e-75 285.8 295 52.2
Zm00001eb194590 Zea mays HOM05D001860 ORTHO05D004922 3.1e-74 282.3 219 61.2
arahy.Tifrunner.gnm1.ann1.WF3EDY Arachis hypogaea HOM05D001860 ORTHO05D004922 4.1e-74 282.0 248 56.5
arahy.Tifrunner.gnm1.ann1.F2WL4X Arachis hypogaea HOM05D001860 ORTHO05D004922 9.1e-74 280.8 248 56.5
Lalb_Chr04g0255941 Lupinus albus HOM05D001860 ORTHO05D004922 3.5e-73 278.9 287 49.8
MELO3C012110.2 Cucumis melo HOM05D001860 ORTHO05D004922 4.5e-73 278.5 249 56.2
HPP92_016837 Vanilla planifolia HOM05D001860 ORTHO05D004922 5.9e-73 278.1 218 59.6
Sabra08G0066100 Salix brachista HOM05D001860 ORTHO05D004922 2.2e-72 276.2 300 50.0
THA.LOC104822044 Tarenaya hassleriana HOM05D001860 ORTHO05D004922 2.2e-72 276.2 251 57.4
SEGI_35280 Sequoiadendron giganteum HOM05D001860 ORTHO05D004922 2.9e-72 275.8 219 59.8
AT1G69523 Arabidopsis thaliana HOM05D001860 ORTHO05D004922 5.0e-72 275.0 222 60.4
CDE04G1474 Ceratophyllum demersum HOM05D001860 ORTHO05D004922 8.5e-72 274.2 219 59.4
CDE06G2440 Ceratophyllum demersum HOM05D001860 ORTHO05D004922 5.5e-71 271.6 219 58.0
ATR0564G196 Amborella trichopoda HOM05D001860 ORTHO05D004922 7.2e-71 271.2 220 58.2
unitig_26.g10298 Utricularia gibba HOM05D001860 ORTHO05D004922 1.6e-70 270.0 243 57.6
Sp5g24630 Schrenkiella parvula HOM05D001860 ORTHO05D004922 4.7e-70 268.5 219 59.4
BcaB03g14720 Brassica carinata HOM05D001860 ORTHO05D004922 1.4e-69 266.9 217 59.0
BcaB03g14715 Brassica carinata HOM05D001860 ORTHO05D004922 1.8e-69 266.5 223 59.2
A07p35850 Brassica napus HOM05D001860 ORTHO05D004922 2.3e-69 266.2 222 58.1
Carub.0002s1616 Capsella rubella HOM05D001860 ORTHO05D004922 2.3e-69 266.2 219 58.9
THA.LOC104822184 Tarenaya hassleriana HOM05D001860 ORTHO05D004922 6.8e-69 264.6 220 60.0
C06p40330 Brassica napus HOM05D001860 ORTHO05D004922 1.2e-68 263.8 217 58.5
BraA07t30786Z Brassica rapa HOM05D001860 ORTHO05D004922 1.2e-68 263.8 221 59.7
A07p35830 Brassica napus HOM05D001860 ORTHO05D004922 2.0e-68 263.1 224 59.4
BraA07t31169Z Brassica rapa HOM05D001860 ORTHO05D004922 2.0e-68 263.1 224 59.4
Pp3c24_6910 Physcomitrium patens HOM05D001860 ORTHO05D004922 2.0e-68 263.1 215 59.5
Aa31LG4G11250 Aethionema arabicum HOM05D001860 ORTHO05D004922 3.4e-68 262.3 220 59.1
BolC6t39399H Brassica oleracea HOM05D001860 ORTHO05D004922 3.4e-68 262.3 213 58.7
Thhalv10018913m.g Eutrema salsugineum HOM05D001860 ORTHO05D004922 4.4e-68 261.9 217 58.1
BcaC08g46392 Brassica carinata HOM05D001860 ORTHO05D004922 7.5e-68 261.2 212 58.5
CARHR062460 Cardamine hirsuta HOM05D001860 ORTHO05D004922 9.8e-68 260.8 216 60.2
BcaB03g15478 Brassica carinata HOM05D001860 ORTHO05D004922 1.7e-67 260.0 213 60.1
A07p35840 Brassica napus HOM05D001860 ORTHO05D004922 1.7e-67 260.0 224 58.5
BolC6t39396H Brassica oleracea HOM05D001860 ORTHO05D004922 1.7e-67 260.0 224 58.5
BolC6t39398H Brassica oleracea HOM05D001860 ORTHO05D004922 1.7e-67 260.0 224 58.5
BraA07t31170Z Brassica rapa HOM05D001860 ORTHO05D004922 1.7e-67 260.0 224 58.5
THA.LOC104822045 Tarenaya hassleriana HOM05D001860 ORTHO05D004922 2.2e-67 259.6 231 57.1
FAN17G3114 Fragaria x ananassa HOM05D001860 ORTHO05D004922 4.8e-67 258.5 220 60.0
C06p40340 Brassica napus HOM05D001860 ORTHO05D004922 6.3e-67 258.1 224 58.0
Carub.0002s1617 Capsella rubella HOM05D001860 ORTHO05D004922 6.3e-67 258.1 217 57.1
AL2G28650 Arabidopsis lyrata HOM05D001860 ORTHO05D004922 1.8e-66 256.5 223 57.8
BraA07t31171Z Brassica rapa HOM05D001860 ORTHO05D004922 1.8e-66 256.5 214 57.9
Carub.0002s1615 Capsella rubella HOM05D001860 ORTHO05D004922 1.8e-66 256.5 223 57.4
AT1G69526 Arabidopsis thaliana HOM05D001860 ORTHO05D004922 4.1e-66 255.4 217 56.2
Sp5g24640 Schrenkiella parvula HOM05D001860 ORTHO05D004922 5.4e-66 255.0 213 58.2
SMO239G0167 Selaginella moellendorffii HOM05D001860 ORTHO05D004922 5.4e-66 255.0 219 58.4
AagrBONN_evm.TU.Sc2ySwM_368.914 Anthoceros agrestis HOM05D001860 ORTHO05D004922 1.6e-65 253.4 215 57.2
BcaC08g46390 Brassica carinata HOM05D001860 ORTHO05D004922 2.9e-64 249.2 195 61.5
Prupe.1G276900 Prunus persica HOM05D001860 ORTHO05D004922 4.7e-62 241.9 156 73.7
C06p40360 Brassica napus HOM05D001860 ORTHO05D004922 3.0e-61 239.2 187 62.0
Mapoly0002s0191 Marchantia polymorpha HOM05D001860 ORTHO05D004922 8.8e-61 237.7 215 55.3
Gohir.D13G076400 Gossypium hirsutum HOM05D001860 ORTHO05D004922 4.4e-60 235.3 156 69.2
Gohir.A13G076700 Gossypium hirsutum HOM05D001860 ORTHO05D004922 5.7e-60 235.0 156 69.9
PGR102G3336 Punica granatum HOM05D001860 ORTHO05D004922 1.1e-58 230.7 156 69.9
CARHR062480 Cardamine hirsuta HOM05D001860 ORTHO05D004922 4.1e-58 228.8 197 57.9
AL2G28640 Arabidopsis lyrata HOM05D001860 ORTHO05D004922 5.0e-56 221.9 217 53.5
Carub.0002s1614 Capsella rubella HOM05D001860 ORTHO05D004922 5.6e-55 218.4 216 53.2
CARHR062450 Cardamine hirsuta HOM05D001860 ORTHO05D004922 1.2e-54 217.2 218 53.2
A07p35820 Brassica napus HOM05D001482 ORTHO05D001499 8.0e-54 214.5 202 54.0
AT1G69520 Arabidopsis thaliana HOM05D001860 ORTHO05D004922 1.4e-53 213.8 209 53.6
BcaC08g46388 Brassica carinata HOM05D001860 ORTHO05D004922 2.3e-53 213.0 202 53.5
BraA07t31168Z Brassica rapa HOM05D001482 ORTHO05D001499 3.0e-53 212.6 202 53.5
BcaB03g14714 Brassica carinata HOM05D001860 ORTHO05D004922 5.2e-53 211.8 202 54.0
BolC6t39394H Brassica oleracea HOM05D001482 ORTHO05D001499 8.9e-53 211.1 202 54.0
Ah.02g129590 Amaranthus hybridus HOM05D001860 ORTHO05D004922 3.7e-51 205.7 223 52.0
CSS0019961 Camellia sinensis var. sinensis HOM05D001860 ORTHO05D004922 4.9e-51 205.3 136 70.6
Thhalv10019583m.g Eutrema salsugineum HOM05D001860 ORTHO05D004922 4.9e-51 205.3 202 52.5
Sp5g24610 Schrenkiella parvula HOM05D001860 ORTHO05D004922 4.6e-49 198.7 211 49.8
AUR62005816 Chenopodium quinoa HOM05D001860 ORTHO05D004922 2.5e-47 193.0 139 69.8
SMO137G0248 Selaginella moellendorffii HOM05D001860 ORTHO05D004922 2.1e-46 189.9 195 49.2
Sc11g0002060 Simmondsia chinensis HOM05D001860 ORTHO05D004922 4.7e-46 188.7 134 69.4
C06p40380 Brassica napus HOM05D001482 ORTHO05D001499 8.0e-46 188.0 224 47.3
Oeu028272.1 Olea europaea HOM05D001860 ORTHO05D004922 4.9e-43 178.7 118 72.9
Sp5g24620 Schrenkiella parvula HOM05D001860 ORTHO05D004922 1.2e-41 174.1 143 60.8
Aa31LG4G11270 Aethionema arabicum HOM05D001860 ORTHO05D004922 4.6e-41 172.2 232 44.0
Dinv16666 Davidia involucrata HOM05D001860 ORTHO05D004922 5.6e-39 165.2 105 73.3
BcaB03g14717 Brassica carinata HOM05D001860 ORTHO05D004922 4.7e-38 162.2 136 57.4
MCO03G556 Micromonas commoda HOM05D001860 ORTHO05D004922 3.7e-35 152.5 234 37.6
BcaC08g45887 Brassica carinata HOM05D001860 ORTHO05D004922 2.1e-33 146.7 128 59.4
C06p40370 Brassica napus HOM05D001860 ORTHO05D004922 2.1e-33 146.7 163 52.1
A07p31570 Brassica napus HOM05D001860 ORTHO05D004922 1.5e-31 140.6 117 62.4
CBR_g41443 Chara braunii HOM05D001860 ORTHO05D004922 1.5e-31 140.6 215 39.1
PRCOL_00003589 Prasinoderma coloniale HOM05D001860 ORTHO05D004922 5.6e-31 138.7 180 45.0
Cpa.g.sc350.4 Carica papaya HOM05D001860 ORTHO05D004922 9.5e-31 137.9 89 70.8
C06p36870 Brassica napus HOM05D000005 ORTHO05D042562 1.6e-30 137.1 120 60.8
BolC6t38800H Brassica oleracea HOM05D000005 ORTHO05D042562 4.7e-30 135.6 166 48.8
Thhalv10019188m.g Eutrema salsugineum HOM05D001860 ORTHO05D004922 1.4e-29 134.0 106 59.4
MCO09G753 Micromonas commoda HOM05D001860 ORTHO05D004922 1.8e-29 133.7 135 49.6
PRCOL_00000783 Prasinoderma coloniale HOM05D001860 ORTHO05D004922 1.8e-29 133.7 172 44.2
CSS0016207 Camellia sinensis var. sinensis HOM05D001860 ORTHO05D004922 3.5e-25 119.4 76 72.4
Cre07.g342550 Chlamydomonas reinhardtii HOM05D001860 ORTHO05D004922 7.8e-25 118.2 251 33.9
CSS0034144 Camellia sinensis var. sinensis HOM05D001860 ORTHO05D004922 3.0e-24 116.3 80 68.8
Actinidia19883 Actinidia chinensis HOM05D001860 ORTHO05D004922 9.6e-23 111.3 99 60.6
VMungo1383G2064 Vigna mungo HOM05D001860 ORTHO05D004922 2.6e-20 103.2 89 52.8
Thecc.01G276100 Theobroma cacao HOM05D001860 ORTHO05D004922 4.9e-19 99.0 84 53.6
arahy.Tifrunner.gnm1.ann1.661SM0 Arachis hypogaea HOM05D001860 ORTHO05D004922 7.3e-15 85.1 85 51.8
MCO03G203 Micromonas commoda HOM05D023757 ORTHO05D024904 7.6e-12 75.1 137 36.5
CBR_g34579 Chara braunii HOM05D001860 ORTHO05D019626 8.4e-11 71.6 176 33.5
Zm00001eb254460 Zea mays HOM05D001860 ORTHO05D004922 1.9e-10 70.5 77 50.6
Cfa024139 Carpinus fangiana HOM05D001860 ORTHO05D004922 2.4e-10 70.1 188 32.4
PRCOL_00001331 Prasinoderma coloniale HOM05D001860 ORTHO05D004922 5.4e-10 68.9 177 26.6
CDE08G0834 Ceratophyllum demersum HOM05D001860 ORTHO05D004922 6.7e-08 62.0 58 51.7
MCO11G161 Micromonas commoda HOM05D019459 ORTHO05D019626 1.1e-07 61.2 128 34.4


User provided reference genes

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