Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0006432g0010 Nicotiana tabacum HOM05D006272 ORTHO05D007989 7.3e-124 447.2 220 100.0
Nitab4.5_0001422g0120 Nicotiana tabacum HOM05D006272 ORTHO05D007989 3.6e-91 338.6 194 88.7
CAN.G2099.3 Capsicum annuum HOM05D006272 ORTHO05D007989 9.9e-89 330.5 222 79.7
PGSC0003DMG400024586 Solanum tuberosum HOM05D006272 ORTHO05D007989 1.4e-87 326.6 221 76.9
Solyc03g113990.3 Solanum lycopersicum HOM05D006272 ORTHO05D007989 4.2e-87 325.1 221 76.0
Sopen03g033040 Solanum pennellii HOM05D006272 ORTHO05D007989 2.1e-86 322.8 220 76.4
Peaxi162Scf00017g02427 Petunia axillaris HOM05D006272 ORTHO05D007989 8.1e-83 310.8 223 75.3
Actinidia19083 Actinidia chinensis HOM05D006272 ORTHO05D007989 2.1e-78 296.2 211 71.1
Migut.D01790 Erythranthe guttata HOM05D006272 ORTHO05D007989 3.3e-76 288.9 213 65.3
MSTRG.4383 Avicennia marina HOM05D006272 ORTHO05D007989 7.4e-76 287.7 222 67.6
QL10p013391 Quercus lobata HOM05D006272 ORTHO05D007989 1.3e-75 287.0 209 67.5
CSS0043549 Camellia sinensis var. sinensis HOM05D006272 ORTHO05D007989 6.3e-75 284.6 226 65.5
Haze_07447 Corylus avellana HOM05D006272 ORTHO05D007989 1.1e-74 283.9 222 67.1
MD06G1180000 Malus domestica HOM05D006272 ORTHO05D007989 4.1e-74 282.0 212 67.5
MD14G1185400 Malus domestica HOM05D006272 ORTHO05D007989 1.2e-73 280.4 212 67.0
Oeu041583.1 Olea europaea HOM05D006272 ORTHO05D007989 1.5e-73 280.0 210 69.0
Prupe.5G178100 Prunus persica HOM05D006272 ORTHO05D007989 2.6e-73 279.3 212 65.6
Cc04_g13100 Coffea canephora HOM05D006272 ORTHO05D007989 3.4e-73 278.9 224 63.8
RcHm_v2.0_Chr7g0179601 Rosa chinensis HOM05D006272 ORTHO05D007989 5.9e-73 278.1 223 64.6
GSVIVG01007814001 Vitis vinifera HOM05D006272 ORTHO05D007989 5.9e-73 278.1 189 73.5
Rhsim12G0162200 Rhododendron simsii HOM05D006272 ORTHO05D007989 2.9e-72 275.8 223 65.0
Ah.11g046120 Amaranthus hybridus HOM05D006272 ORTHO05D007989 3.8e-72 275.4 202 66.3
MD06G1180300 Malus domestica HOM05D006272 ORTHO05D007989 6.5e-72 274.6 220 65.0
Manes.14G069600 Manihot esculenta HOM05D006272 ORTHO05D007989 8.5e-72 274.2 207 66.7
vmacro16592 Vaccinium macrocarpon HOM05D006272 ORTHO05D007989 1.1e-71 273.9 228 64.5
EL10Ac5g10820 Beta vulgaris HOM05D006272 ORTHO05D007989 1.4e-71 273.5 174 74.1
Glyma.04G179400 Glycine max HOM05D006272 ORTHO05D007989 3.2e-71 272.3 169 76.3
Glyma.06G185200 Glycine max HOM05D006272 ORTHO05D007989 3.2e-71 272.3 229 61.6
CSS0019620 Camellia sinensis var. sinensis HOM05D006272 ORTHO05D007989 5.5e-71 271.6 213 66.7
Eucgr.B00343 Eucalyptus grandis HOM05D006272 ORTHO05D007989 5.5e-71 271.6 223 63.7
FvH4_5g16490 Fragaria vesca HOM05D006272 ORTHO05D007989 1.6e-70 270.0 223 61.4
CiPaw.12G023800 Carya illinoinensis HOM05D006272 ORTHO05D007989 2.1e-70 269.6 211 66.4
Lj5A121G99 Lonicera japonica HOM05D006272 ORTHO05D007989 2.7e-70 269.2 192 70.8
Potri.015G072000 Populus trichocarpa HOM05D006272 ORTHO05D007989 2.7e-70 269.2 171 73.7
Ciclev10022132m.g Citrus clementina HOM05D006272 ORTHO05D007989 6.1e-70 268.1 177 75.1
TPR.G15079 Trifolium pratense HOM05D006272 ORTHO05D007989 1.8e-69 266.5 182 69.2
Ca_16206_v3 Cicer arietinum L. HOM05D006272 ORTHO05D007989 3.0e-69 265.8 173 73.4
VMungo1309G0353 Vigna mungo HOM05D006272 ORTHO05D007989 3.9e-69 265.4 170 72.4
Atru.chr9.2416 Acer truncatum HOM05D006272 ORTHO05D007989 5.1e-69 265.0 184 71.2
Duzib205G0574 Durio zibethinus HOM05D006272 ORTHO05D007989 5.1e-69 265.0 225 64.0
HanXRQChr16g0503601 Helianthus annuus HOM05D006272 ORTHO05D007989 5.1e-69 265.0 227 59.0
Sc12g0005560 Simmondsia chinensis HOM05D006272 ORTHO05D007989 6.7e-69 264.6 216 64.4
Phvul.009G181400 Phaseolus vulgaris HOM05D006272 ORTHO05D007989 8.7e-69 264.2 217 64.1
Gohir.A03G017300 Gossypium hirsutum HOM05D006272 ORTHO05D007989 1.1e-68 263.8 168 76.2
Sabra15G0096800 Salix brachista HOM05D006272 ORTHO05D007989 1.1e-68 263.8 168 74.4
Gohir.D03G150700 Gossypium hirsutum HOM05D006272 ORTHO05D007989 1.5e-68 263.5 178 73.6
SGA_v2.0_scaffold114G31850 Striga asiatica HOM05D006272 ORTHO05D007989 1.5e-68 263.5 224 62.1
AUR62031036 Chenopodium quinoa HOM05D006272 ORTHO05D007989 3.3e-68 262.3 191 68.1
CsaV3_1G001760 Cucumis sativus L. HOM05D006272 ORTHO05D007989 4.3e-68 261.9 223 59.6
ECA232G4277 Erigeron canadensis HOM05D006272 ORTHO05D007989 9.7e-68 260.8 209 62.2
FAN04G2131 Fragaria x ananassa HOM05D006272 ORTHO05D007989 1.6e-67 260.0 195 67.7
FAN13G1305 Fragaria x ananassa HOM05D006272 ORTHO05D007989 1.6e-67 260.0 195 67.7
Thecc.03G005700 Theobroma cacao HOM05D006272 ORTHO05D007989 1.6e-67 260.0 226 61.9
ClCG06G016760 Citrullus lanatus HOM05D006272 ORTHO05D007989 2.2e-67 259.6 229 59.0
Gorai.003G157900 Gossypium raimondii HOM05D006272 ORTHO05D007989 2.2e-67 259.6 165 76.4
Lalb_Chr23g0273081 Lupinus albus HOM05D006272 ORTHO05D007989 2.8e-67 259.2 176 70.5
Lj1g0014498 Lotus japonicus HOM05D006272 ORTHO05D007989 3.7e-67 258.8 224 60.3
CANSAT80G1784 Cannabis sativa HOM05D006272 ORTHO05D007989 4.8e-67 258.5 213 62.0
COL.COLO4_04328 Corchorus olitorius HOM05D006272 ORTHO05D007989 4.8e-67 258.5 202 64.4
FAN18G3972 Fragaria x ananassa HOM05D006272 ORTHO05D007989 4.8e-67 258.5 242 56.6
Medtr3g078320 Medicago truncatula HOM05D006272 ORTHO05D007989 1.4e-66 256.9 177 69.5
Psat5g113800 Pisum sativum HOM05D006272 ORTHO05D007989 1.4e-66 256.9 228 59.6
AUR62008277 Chenopodium quinoa HOM05D006272 ORTHO05D007989 2.4e-66 256.1 200 63.5
Lsat_1_v5_gn_4_72700 Lactuca sativa HOM05D006272 ORTHO05D007989 7.7e-65 251.1 214 61.7
THA.LOC104809256 Tarenaya hassleriana HOM05D006272 ORTHO05D007989 7.7e-65 251.1 167 71.9
BraSC37t46149Z Brassica rapa HOM05D006272 ORTHO05D007989 1.0e-64 250.8 173 69.9
PGR083G1342 Punica granatum HOM05D006272 ORTHO05D007989 1.3e-64 250.4 166 69.9
Cfa019077 Carpinus fangiana HOM05D006272 ORTHO05D007989 1.7e-64 250.0 196 65.8
BcaC04g20846 Brassica carinata HOM05D006272 ORTHO05D007989 2.9e-64 249.2 173 69.9
BolC9t56708H Brassica oleracea HOM05D006272 ORTHO05D007989 2.9e-64 249.2 173 69.9
Thhalv10014644m.g Eutrema salsugineum HOM05D006272 ORTHO05D007989 3.8e-64 248.8 221 58.8
Nn4g22890 Nelumbo nucifera HOM05D006272 ORTHO05D007524 1.9e-63 246.5 208 59.6
arahy.Tifrunner.gnm1.ann1.I0QXBL Arachis hypogaea HOM05D006272 ORTHO05D007989 3.2e-63 245.7 194 63.9
MELO3C017116.2 Cucumis melo HOM05D006272 ORTHO05D007989 3.2e-63 245.7 168 67.3
TAR622G0996 Trochodendron aralioides HOM05D006272 ORTHO05D007989 3.2e-63 245.7 207 59.9
AL8G24090 Arabidopsis lyrata HOM05D006272 ORTHO05D007989 5.5e-63 245.0 203 62.1
Sed0009129 Sechium edule HOM05D006272 ORTHO05D007989 7.2e-63 244.6 187 64.2
CDE04G2481 Ceratophyllum demersum HOM05D006272 ORTHO05D006222 1.6e-62 243.4 169 69.2
Sp6g11960 Schrenkiella parvula HOM05D006272 ORTHO05D007989 2.1e-62 243.0 177 68.4
Aa31LG3G6090 Aethionema arabicum HOM05D006272 ORTHO05D007989 2.7e-62 242.7 175 68.6
AT5G50100 Arabidopsis thaliana HOM05D006272 ORTHO05D007989 4.6e-62 241.9 174 68.4
Carub.0008s1010 Capsella rubella HOM05D006272 ORTHO05D007989 6.1e-62 241.5 176 67.6
Zm00001eb433220 Zea mays HOM05D006272 ORTHO05D007989 1.4e-61 240.4 161 68.3
BcaB08g35362 Brassica carinata HOM05D006272 ORTHO05D007989 1.8e-61 240.0 162 70.4
PSO832G1007 Papaver somniferum HOM05D006272 ORTHO05D007989 1.8e-61 240.0 208 59.6
unitig_46.g18473 Utricularia gibba HOM05D004430 ORTHO05D007989 1.5e-60 236.9 179 65.4
A10p08550 Brassica napus HOM05D006272 ORTHO05D007989 2.0e-60 236.5 162 69.1
C09p38510 Brassica napus HOM05D006272 ORTHO05D007989 2.0e-60 236.5 162 69.1
Aqoxy3G03085 Aquilegia oxysepala HOM05D006272 ORTHO05D007989 7.4e-60 234.6 167 67.7
Os04g0668800 Oryza sativa ssp. japonica HOM05D006272 ORTHO05D007989 9.7e-60 234.2 175 63.4
Hund09410 Selenicereus undatus HOM05D006272 ORTHO05D007989 2.2e-59 233.0 155 72.3
arahy.Tifrunner.gnm1.ann1.LZB4LR Arachis hypogaea HOM05D006272 ORTHO05D007989 9.1e-58 227.6 181 63.5
FAN08G1485 Fragaria x ananassa HOM05D006272 ORTHO05D007989 1.2e-57 227.3 236 52.5
Aqoxy3G03086 Aquilegia oxysepala HOM05D006272 ORTHO05D007989 2.0e-57 226.5 195 61.0
Cpa.g.c38966 Carica papaya HOM05D006272 ORTHO05D007989 5.9e-57 224.9 125 83.2
PSO063G7353 Papaver somniferum HOM05D006272 ORTHO05D007989 1.3e-56 223.8 154 69.5
DCAR_021559 Daucus carota HOM05D006272 ORTHO05D007989 9.4e-55 217.6 145 71.7
HPP92_028587 Vanilla planifolia HOM05D006272 ORTHO05D007989 1.2e-54 217.2 177 59.9
ATR1149G021 Amborella trichopoda HOM05D006272 ORTHO05D007989 5.2e-53 211.8 134 75.4
Mapoly0071s0065 Marchantia polymorpha HOM05D006272 ORTHO05D007989 4.4e-52 208.8 188 55.9
CSS0030983 Camellia sinensis var. sinensis HOM05D006272 ORTHO05D007989 1.8e-50 203.4 139 75.5
MBI15_g12943_MAGBIO Magnolia biondii HOM05D006272 ORTHO05D007989 3.8e-48 195.7 159 62.9
TWI15G0925 Tripterygium wilfordii HOM05D006272 ORTHO05D007989 6.5e-48 194.9 129 72.1
Pp3c1_15150 Physcomitrium patens HOM05D006272 ORTHO05D007989 5.2e-45 185.3 208 50.0
CBR_g17090 Chara braunii HOM05D006272 ORTHO05D007989 1.5e-44 183.7 149 53.7
Sed0028033 Sechium edule HOM05D006272 ORTHO05D007989 5.7e-44 181.8 127 69.3
CARHR258530 Cardamine hirsuta HOM05D006272 ORTHO05D007989 7.0e-42 174.9 173 56.1
SMO134G0173 Selaginella moellendorffii HOM05D006272 ORTHO05D007989 7.0e-42 174.9 111 69.4
Hma1.2p1_1643F.1_g295250 Hydrangea macrophylla HOM05D006272 ORTHO05D007989 7.2e-39 164.9 151 58.9
Hma1.2p1_2351F.1_g320495 Hydrangea macrophylla HOM05D006272 ORTHO05D007989 7.2e-39 164.9 151 58.9
SalBow3G0460 Salvia bowleyana HOM05D006272 ORTHO05D007989 5.7e-36 155.2 93 80.6
Cre03.g145587 Chlamydomonas reinhardtii HOM05D006272 ORTHO05D007989 3.5e-33 146.0 137 50.4
AL8G10070 Arabidopsis lyrata HOM05D006272 ORTHO05D007989 1.3e-32 144.1 93 76.3
Dinv09172 Davidia involucrata HOM05D006272 ORTHO05D007989 1.5e-31 140.6 135 57.0
MCO16G260 Micromonas commoda HOM05D006272 ORTHO05D007989 2.5e-31 139.8 126 48.4
PRCOL_00006774 Prasinoderma coloniale HOM05D006272 ORTHO05D007989 5.5e-31 138.7 136 47.1
Cpa.g.c35589.1 Carica papaya HOM05D006272 ORTHO05D007989 1.5e-28 130.6 137 52.6
SalBow3G4540 Salvia bowleyana HOM05D006272 ORTHO05D007989 5.7e-28 128.6 126 54.0
QL12p034838 Quercus lobata HOM05D006272 ORTHO05D007989 2.2e-27 126.7 82 75.6
Gohir.A03G017120 Gossypium hirsutum HOM05D006272 ORTHO05D007989 6.3e-27 125.2 89 68.5
MBI15_g10564_MAGBIO Magnolia biondii HOM05D006272 ORTHO05D007989 4.7e-22 109.0 82 63.4
Cre02.g095077 Chlamydomonas reinhardtii HOM05D006272 ORTHO05D007989 3.2e-18 96.3 114 36.0
PRCOL_00004884 Prasinoderma coloniale HOM05D006272 ORTHO05D030206 1.6e-09 67.4 146 30.8
TPR.G22672 Trifolium pratense HOM05D006272 ORTHO05D007989 1.5e-07 60.8 36 72.2
Cre03.g208049 Chlamydomonas reinhardtii HOM05D006272 ORTHO05D139805 4.3e-07 59.3 81 35.8


User provided reference genes

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