Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0006429g0040 Nicotiana tabacum HOM05D004064 ORTHO05D009909 6.5e-118 427.6 238 100.0
Nitab4.5_0002581g0010 Nicotiana tabacum HOM05D004064 ORTHO05D009909 4.1e-88 328.6 242 79.8
Nitab4.5_0001461g0080 Nicotiana tabacum HOM05D004064 ORTHO05D009909 1.5e-77 293.5 243 65.0
Nitab4.5_0001907g0080 Nicotiana tabacum HOM05D004064 ORTHO05D009909 9.5e-69 264.2 220 65.0
Nitab4.5_0029420g0010 Nicotiana tabacum HOM05D004064 ORTHO05D009909 7.3e-53 211.5 125 82.4
Nitab4.5_0000535g0070 Nicotiana tabacum HOM05D004064 ORTHO05D009909 6.2e-52 208.4 134 79.9
Nitab4.5_0000831g0080 Nicotiana tabacum HOM05D004064 ORTHO05D009909 1.5e-50 203.8 206 58.3
Nitab4.5_0021453g0010 Nicotiana tabacum HOM05D004064 ORTHO05D009909 1.5e-50 203.8 154 69.5
Nitab4.5_0000161g0170 Nicotiana tabacum HOM05D004064 ORTHO05D009909 6.4e-49 198.4 147 70.1
Nitab4.5_0007351g0040 Nicotiana tabacum HOM05D004064 ORTHO05D009909 2.4e-48 196.4 121 80.2
PGSC0003DMG400038860 Solanum tuberosum HOM05D004064 ORTHO05D011910 5.2e-43 178.7 242 48.8
Sopen08g005960 Solanum pennellii HOM05D004064 ORTHO05D011910 4.9e-41 172.2 239 51.5
Nitab4.5_0005665g0070 Nicotiana tabacum HOM05D004064 ORTHO05D009909 4.1e-40 169.1 154 61.0
Sopen08g008550 Solanum pennellii HOM05D004064 ORTHO05D011910 2.7e-39 166.4 240 49.6
Sopen02g009320 Solanum pennellii HOM05D000017 ORTHO05D011910 3.0e-38 162.9 246 47.2
Sopen07g020390 Solanum pennellii HOM05D000017 ORTHO05D011910 3.0e-38 162.9 246 47.2
Sopen02g014660 Solanum pennellii HOM05D000017 ORTHO05D011910 1.9e-37 160.2 246 47.2
Nitab4.5_0003194g0010 Nicotiana tabacum HOM05D004064 ORTHO05D009909 5.6e-37 158.7 223 47.1
Nitab4.5_0004504g0080 Nicotiana tabacum HOM05D004064 ORTHO05D009909 5.6e-37 158.7 88 85.2
Nitab4.5_0000555g0050 Nicotiana tabacum HOM05D004064 ORTHO05D009909 3.6e-36 156.0 206 49.5
Nitab4.5_0003166g0020 Nicotiana tabacum HOM05D004064 ORTHO05D009909 3.1e-35 152.9 95 78.9
PGSC0003DMG400035350 Solanum tuberosum HOM05D004064 ORTHO05D011910 5.2e-35 152.1 227 46.3
Sopen04g011640 Solanum pennellii HOM05D004064 ORTHO05D009909 1.7e-33 147.1 305 34.8
PGSC0003DMG400001699 Solanum tuberosum HOM05D004064 ORTHO05D009909 1.0e-30 137.9 314 32.8
PGSC0003DMG400045086 Solanum tuberosum HOM05D004064 ORTHO05D009909 1.7e-30 137.1 282 34.0
Nitab4.5_0010381g0030 Nicotiana tabacum HOM05D004064 ORTHO05D009909 2.3e-30 136.7 222 41.4
Nitab4.5_0003496g0030 Nicotiana tabacum HOM05D004064 ORTHO05D009909 4.7e-28 129.0 239 45.2
Sopen08g011770 Solanum pennellii HOM05D004064 ORTHO05D009909 2.4e-27 126.7 296 34.8
Sopen10g005830 Solanum pennellii HOM05D000017 ORTHO05D011910 1.5e-26 124.0 116 51.7
Solyc04g039737.1 Solanum lycopersicum HOM05D004064 ORTHO05D009909 4.4e-26 122.5 159 44.0
Nitab4.5_0003217g0040 Nicotiana tabacum HOM05D004064 ORTHO05D009909 2.4e-24 116.7 84 63.1
PGSC0003DMG400043109 Solanum tuberosum HOM05D004064 ORTHO05D009909 3.2e-24 116.3 133 45.9
Nitab4.5_0002311g0030 Nicotiana tabacum HOM05D004064 ORTHO05D009909 7.8e-23 111.7 84 66.7
PGSC0003DMG400012698 Solanum tuberosum HOM05D004064 ORTHO05D009909 3.0e-22 109.8 168 39.3
Sopen01g016940 Solanum pennellii HOM05D004064 ORTHO05D009909 1.9e-21 107.1 133 42.1
Solyc08g041720.1 Solanum lycopersicum HOM05D004064 ORTHO05D009909 3.1e-19 99.8 114 46.5
Nitab4.5_0001107g0130 Nicotiana tabacum HOM05D004064 ORTHO05D009909 4.0e-19 99.4 96 59.4
CAN.G278.18 Capsicum annuum HOM05D004064 ORTHO05D009909 1.2e-18 97.8 102 47.1
CAN.G1289.3 Capsicum annuum HOM05D004064 ORTHO05D009909 2.6e-18 96.7 101 42.6
Sopen04g024150 Solanum pennellii HOM05D004064 ORTHO05D009909 1.3e-17 94.4 239 32.2
PGSC0003DMG400038561 Solanum tuberosum HOM05D004064 ORTHO05D009909 1.1e-16 91.3 145 36.6
CAN.G127.19 Capsicum annuum HOM05D004064 ORTHO05D009909 1.4e-16 90.9 101 42.6
PGSC0003DMG400035494 Solanum tuberosum HOM05D004064 ORTHO05D009909 5.4e-16 89.0 105 45.7
PGSC0003DMG401018257 Solanum tuberosum HOM05D004064 ORTHO05D009909 9.3e-16 88.2 93 43.0
Nitab4.5_0007771g0020 Nicotiana tabacum HOM05D004064 ORTHO05D009909 2.7e-15 86.7 164 36.0
Nitab4.5_0008516g0050 Nicotiana tabacum HOM05D004064 ORTHO05D009909 3.9e-14 82.8 244 34.8
Nitab4.5_0002649g0140 Nicotiana tabacum HOM05D004064 ORTHO05D009909 8.7e-14 81.6 86 52.3
Sopen10g015440 Solanum pennellii HOM05D010431 ORTHO05D010855 2.5e-13 80.1 104 41.3
PGSC0003DMG400035967 Solanum tuberosum HOM05D010431 ORTHO05D016891 2.1e-12 77.0 80 47.5
Sopen08g001370 Solanum pennellii HOM05D000017 ORTHO05D000013 3.7e-12 76.3 155 34.2
Sopen05g012050 Solanum pennellii HOM05D000017 ORTHO05D000013 4.8e-12 75.9 155 34.2
Sopen05g012450 Solanum pennellii HOM05D000017 ORTHO05D009561 4.8e-12 75.9 155 34.2
Sopen12g005860 Solanum pennellii HOM05D000017 ORTHO05D000013 6.2e-12 75.5 155 34.2
Sopen03g014420 Solanum pennellii HOM05D004064 ORTHO05D011910 3.1e-11 73.2 155 39.4
Sopen06g017430 Solanum pennellii HOM05D000017 ORTHO05D000013 4.0e-11 72.8 154 33.8
Sopen11g013980 Solanum pennellii HOM05D000017 ORTHO05D009561 4.0e-11 72.8 254 28.7
Sopen12g026480 Solanum pennellii HOM05D000017 ORTHO05D009561 1.2e-10 71.2 154 32.5
Sopen03g024100 Solanum pennellii HOM05D004064 ORTHO05D009909 2.0e-10 70.5 96 38.5
Sopen02g010180 Solanum pennellii HOM05D000017 ORTHO05D009909 3.4e-10 69.7 59 55.9
Sopen03g028020 Solanum pennellii HOM05D004064 ORTHO05D009909 4.5e-10 69.3 152 32.9
Sopen04g022370 Solanum pennellii HOM05D000017 ORTHO05D011910 4.5e-10 69.3 154 49.4
PGSC0003DMG400039421 Solanum tuberosum HOM05D005093 ORTHO05D009561 5.8e-10 68.9 131 31.3
PGSC0003DMG400043277 Solanum tuberosum HOM05D004064 ORTHO05D009909 5.8e-10 68.9 59 57.6
Sopen08g013500 Solanum pennellii HOM05D000004 ORTHO05D000002 1.0e-09 68.2 56 60.7
Sopen03g016280 Solanum pennellii HOM05D004064 ORTHO05D009909 1.3e-09 67.8 103 37.9
Nitab4.5_0006105g0030 Nicotiana tabacum HOM05D000017 ORTHO05D001349 2.2e-09 67.0 239 28.9
Sopen01g007650 Solanum pennellii HOM05D010431 ORTHO05D009909 2.9e-09 66.6 80 45.0
Sopen05g004820 Solanum pennellii HOM05D000072 ORTHO05D011910 3.8e-09 66.2 181 42.5
Sopen10g027270 Solanum pennellii HOM05D004064 ORTHO05D009909 6.4e-09 65.5 59 55.9
Ah.10g025880 Amaranthus hybridus HOM05D009581 ORTHO05D004107 8.4e-09 65.1 134 30.6
PGSC0003DMG400047205 Solanum tuberosum HOM05D004064 ORTHO05D009909 8.4e-09 65.1 102 37.3
Nitab4.5_0009324g0050 Nicotiana tabacum HOM05D004064 ORTHO05D009909 1.1e-08 64.7 91 45.1
PGSC0003DMG400007543 Solanum tuberosum HOM05D004064 ORTHO05D009909 1.1e-08 64.7 94 37.2
PGSC0003DMG400017950 Solanum tuberosum HOM05D004064 ORTHO05D009561 1.1e-08 64.7 60 45.0
Sopen11g026090 Solanum pennellii HOM05D000017 ORTHO05D000013 2.5e-08 63.5 134 33.6
PGSC0003DMG400017483 Solanum tuberosum HOM05D000017 ORTHO05D009909 7.1e-08 62.0 59 50.8
Solyc04g054360.1 Solanum lycopersicum HOM05D004064 ORTHO05D009909 9.3e-08 61.6 59 52.5
Sopen03g019250 Solanum pennellii HOM05D000528 ORTHO05D001569 9.3e-08 61.6 49 59.2
Sopen03g026910 Solanum pennellii HOM05D000004 ORTHO05D010855 1.6e-07 60.8 114 32.5
Sopen04g015180 Solanum pennellii HOM05D000004 ORTHO05D011910 1.6e-07 60.8 146 47.3
Sopen08g005490 Solanum pennellii HOM05D000017 ORTHO05D000013 2.7e-07 60.1 133 33.1
Sopen07g006850 Solanum pennellii HOM05D000017 ORTHO05D000013 3.5e-07 59.7 229 24.5
Nitab4.5_0013419g0020 Nicotiana tabacum HOM05D008024 ORTHO05D010405 4.6e-07 59.3 231 23.4
Nitab4.5_0000498g0050 Nicotiana tabacum HOM05D004064 ORTHO05D009909 6.0e-07 58.9 54 51.9
Nitab4.5_0001427g0050 Nicotiana tabacum HOM05D008024 ORTHO05D010405 6.0e-07 58.9 241 27.0
Solyc04g016085.1 Solanum lycopersicum HOM05D000017 ORTHO05D001349 6.0e-07 58.9 214 24.8
Sopen05g008970 Solanum pennellii HOM05D004064 ORTHO05D011910 6.0e-07 58.9 48 60.4
CAN.G423.33 Capsicum annuum HOM05D004064 ORTHO05D009909 1.0e-06 58.2 179 25.7
CAN.G946.2 Capsicum annuum HOM05D000017 ORTHO05D001349 1.0e-06 58.2 98 32.7
Sopen05g016400 Solanum pennellii HOM05D000017 ORTHO05D011910 1.0e-06 58.2 140 37.1
Sopen09g015000 Solanum pennellii HOM05D004064 ORTHO05D009909 1.3e-06 57.8 53 54.7
Peaxi162Scf00086g00199 Petunia axillaris HOM05D006921 ORTHO05D009185 1.8e-06 57.4 98 35.7
Sopen05g029250 Solanum pennellii HOM05D000017 ORTHO05D001349 1.8e-06 57.4 229 23.1
Sopen11g025620 Solanum pennellii HOM05D000017 ORTHO05D001349 1.8e-06 57.4 229 24.0
Sopen02g011340 Solanum pennellii HOM05D000017 ORTHO05D000013 2.3e-06 57.0 229 23.6
Sopen03g025320 Solanum pennellii HOM05D000017 ORTHO05D000013 2.3e-06 57.0 229 23.6
Sopen06g004260 Solanum pennellii HOM05D000017 ORTHO05D000013 2.3e-06 57.0 229 23.6
Sopen06g014550 Solanum pennellii HOM05D000017 ORTHO05D001349 2.3e-06 57.0 229 23.6
Sopen09g030880 Solanum pennellii HOM05D000017 ORTHO05D000013 2.3e-06 57.0 229 23.6
Sopen10g031980 Solanum pennellii HOM05D000017 ORTHO05D000013 2.3e-06 57.0 229 23.6
Peaxi162Scf00136g01915 Petunia axillaris HOM05D006921 ORTHO05D009185 3.0e-06 56.6 96 35.4
Solyc10g054675.1 Solanum lycopersicum HOM05D004064 ORTHO05D011910 3.0e-06 56.6 36 63.9
Sopen11g024710 Solanum pennellii HOM05D000002 ORTHO05D000001 3.0e-06 56.6 49 59.2
Peaxi162Scf00062g00106 Petunia axillaris HOM05D006921 ORTHO05D009185 3.9e-06 56.2 96 36.5
Solyc03g070470.1 Solanum lycopersicum HOM05D000528 ORTHO05D001569 3.9e-06 56.2 49 55.1
Sopen04g014920 Solanum pennellii HOM05D000017 ORTHO05D000013 3.9e-06 56.2 229 23.6
Sopen01g032040 Solanum pennellii HOM05D010431 ORTHO05D016891 5.1e-06 55.8 229 34.1
Nitab4.5_0000256g0010 Nicotiana tabacum HOM05D008024 ORTHO05D010405 6.7e-06 55.5 128 31.2
CAN.G1724.2 Capsicum annuum HOM05D002537 ORTHO05D002751 8.7e-06 55.1 225 25.8
CAN.G834.15 Capsicum annuum HOM05D004064 ORTHO05D009909 8.7e-06 55.1 50 52.0
Dinv39745 Davidia involucrata HOM05D009581 ORTHO05D004107 8.7e-06 55.1 128 30.5
PGSC0003DMG400004105 Solanum tuberosum HOM05D000017 ORTHO05D009909 8.7e-06 55.1 127 35.4


User provided reference genes

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