Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0006420g0050 Nicotiana tabacum HOM05D008687 ORTHO05D010822 1.8e-44 182.2 92 100.0
Nitab4.5_0002247g0150 Nicotiana tabacum HOM05D008687 ORTHO05D010822 1.1e-28 129.8 66 95.5
Solyc01g097020.4 Solanum lycopersicum HOM05D008687 ORTHO05D010822 1.3e-18 96.3 50 92.0
TAR374G0349 Trochodendron aralioides HOM05D008687 ORTHO05D010822 8.8e-15 83.6 67 65.7
CSS0023630 Camellia sinensis var. sinensis HOM05D008687 ORTHO05D010822 1.3e-13 79.7 51 78.4
CiPaw.01G073700 Carya illinoinensis HOM05D008687 ORTHO05D010822 1.7e-13 79.3 50 74.0
Hma1.2p1_0384F.1_g141170 Hydrangea macrophylla HOM05D008687 ORTHO05D010822 1.7e-13 79.3 51 72.5
Manes.05G025100 Manihot esculenta HOM05D008687 ORTHO05D010822 2.8e-13 78.6 52 71.2
Lalb_Chr17g0342441 Lupinus albus HOM05D008687 ORTHO05D010822 8.3e-13 77.0 57 64.9
Glyma.07G057502 Glycine max HOM05D008687 ORTHO05D010822 4.1e-12 74.7 51 72.5
Lalb_Chr10g0100361 Lupinus albus HOM05D008687 ORTHO05D010822 4.1e-12 74.7 51 68.6
Manes.01G247900 Manihot esculenta HOM05D008687 ORTHO05D010822 7.0e-12 73.9 51 68.6
Nn4g26235 Nelumbo nucifera HOM05D008687 ORTHO05D010822 1.2e-11 73.2 45 68.9
Phvul.010G111800 Phaseolus vulgaris HOM05D008687 ORTHO05D010822 1.6e-11 72.8 51 68.6
Lj3g0001832 Lotus japonicus HOM05D008687 ORTHO05D010822 3.5e-11 71.6 51 66.7
MD07G1146600 Malus domestica HOM05D008687 ORTHO05D010822 3.5e-11 71.6 51 68.6
Thecc.01G345800 Theobroma cacao HOM05D008687 ORTHO05D010822 3.5e-11 71.6 48 70.8
Gohir.A11G095700 Gossypium hirsutum HOM05D008687 ORTHO05D010822 7.8e-11 70.5 50 64.0
Gohir.D11G100600 Gossypium hirsutum HOM05D008687 ORTHO05D010822 7.8e-11 70.5 50 64.0
Gorai.007G106900 Gossypium raimondii HOM05D008687 ORTHO05D010822 7.8e-11 70.5 50 64.0
MD01G1077100 Malus domestica HOM05D008687 ORTHO05D010822 7.8e-11 70.5 49 67.3
Psat4g160200 Pisum sativum HOM05D008687 ORTHO05D010822 7.8e-11 70.5 62 50.0
RcHm_v2.0_Chr1g0359021 Rosa chinensis HOM05D008687 ORTHO05D010822 7.8e-11 70.5 51 68.6
TPR.G20504 Trifolium pratense HOM05D008687 ORTHO05D010822 1.0e-10 70.1 60 58.3
Glyma.16G026500 Glycine max HOM05D008687 ORTHO05D010822 1.3e-10 69.7 51 66.7
Sc01g0002900 Simmondsia chinensis HOM05D008687 ORTHO05D010822 8.6e-10 67.0 51 58.8
Migut.B01844 Erythranthe guttata HOM05D008687 ORTHO05D010822 3.3e-09 65.1 51 62.7
Gorai.001G156200 Gossypium raimondii HOM05D008687 ORTHO05D010822 5.6e-09 64.3 42 71.4
Gohir.D07G144200 Gossypium hirsutum HOM05D008687 ORTHO05D010822 1.2e-08 63.2 42 69.0
Ca_26755_v3 Cicer arietinum L. HOM05D008687 ORTHO05D010822 1.6e-08 62.8 43 60.5
Cc02_g39090 Coffea canephora HOM05D008687 ORTHO05D010822 2.8e-08 62.0 33 78.8
HanXRQChr06g0166891 Helianthus annuus HOM05D008687 ORTHO05D010822 6.1e-08 60.8 50 46.0
Prupe.2G184600 Prunus persica HOM05D008687 ORTHO05D010822 6.1e-08 60.8 50 54.0
COL.COLO4_06317 Corchorus olitorius HOM05D008687 ORTHO05D010822 2.3e-07 58.9 51 54.9
Potri.014G095901 Populus trichocarpa HOM05D008687 ORTHO05D010822 3.0e-07 58.5 51 56.9
FAN03G1283 Fragaria x ananassa HOM05D008687 ORTHO05D010822 5.2e-07 57.8 34 70.6
FAN06G2082 Fragaria x ananassa HOM05D036424 ORTHO05D010822 5.2e-07 57.8 34 70.6
unitig_52.g17066 Utricularia gibba HOM05D008687 ORTHO05D010822 6.8e-07 57.4 48 50.0
Gohir.A07G139100 Gossypium hirsutum HOM05D008687 ORTHO05D010822 2.6e-06 55.5 43 65.1
FAN10G1050 Fragaria x ananassa HOM05D036424 ORTHO05D010822 4.4e-06 54.7 33 69.7
FAN10G4301 Fragaria x ananassa HOM05D036424 ORTHO05D010822 4.4e-06 54.7 33 69.7
Nn1g02205 Nelumbo nucifera HOM05D008687 ORTHO05D010822 5.7e-06 54.3 33 69.7


User provided reference genes

Program Settings