Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0006415g0050 Nicotiana tabacum HOM05D000017 ORTHO05D009364 9.4e-47 190.3 129 100.0
Nitab4.5_0005261g0050 Nicotiana tabacum HOM05D052436 ORTHO05D286291 8.0e-22 107.5 127 52.8
Nitab4.5_0000173g0280 Nicotiana tabacum HOM05D000017 ORTHO05D001349 4.4e-20 101.7 61 82.0
Nitab4.5_0001284g0140 Nicotiana tabacum HOM05D000017 ORTHO05D001349 1.5e-12 76.6 59 66.1
CAN.G921.8 Capsicum annuum HOM05D001891 ORTHO05D005832 1.1e-10 70.5 70 54.3
Peaxi162Scf00174g01017 Petunia axillaris HOM05D000017 ORTHO05D015725 1.1e-10 70.5 54 63.0
Peaxi162Scf00066g01917 Petunia axillaris HOM05D000017 ORTHO05D015725 9.2e-10 67.4 54 61.1
PGSC0003DMG400027290 Solanum tuberosum HOM05D000017 ORTHO05D013101 1.2e-09 67.0 61 54.1
Peaxi162Scf00228g00086 Petunia axillaris HOM05D000017 ORTHO05D015725 1.6e-09 66.6 53 60.4
Peaxi162Scf00089g00005 Petunia axillaris HOM05D000017 ORTHO05D001349 2.0e-09 66.2 57 54.4
Peaxi162Scf00133g00123 Petunia axillaris HOM05D000017 ORTHO05D009364 2.0e-09 66.2 65 52.3
Peaxi162Scf00304g00048 Petunia axillaris HOM05D000017 ORTHO05D001349 2.0e-09 66.2 62 53.2
Peaxi162Scf00102g01064 Petunia axillaris HOM05D000017 ORTHO05D001349 2.7e-09 65.9 60 55.0
Peaxi162Scf01492g00009 Petunia axillaris HOM05D000017 ORTHO05D001349 2.7e-09 65.9 60 55.0
Peaxi162Scf01266g00038 Petunia axillaris HOM05D000017 ORTHO05D001349 3.5e-09 65.5 61 52.5
Peaxi162Scf00840g00013 Petunia axillaris HOM05D000017 ORTHO05D001349 4.6e-09 65.1 73 50.7
Solyc10g055423.1 Solanum lycopersicum HOM05D000017 ORTHO05D013101 4.6e-09 65.1 54 57.4
Sopen01g006400 Solanum pennellii HOM05D000017 ORTHO05D000013 4.6e-09 65.1 54 57.4
Sopen05g008290 Solanum pennellii HOM05D000002 ORTHO05D001349 4.6e-09 65.1 54 57.4
Sopen06g010760 Solanum pennellii HOM05D000017 ORTHO05D001349 4.6e-09 65.1 53 58.5
Sopen07g022680 Solanum pennellii HOM05D000017 ORTHO05D013101 4.6e-09 65.1 54 57.4
Sopen12g014770 Solanum pennellii HOM05D000017 ORTHO05D013101 4.6e-09 65.1 53 58.5
PGSC0003DMG400045289 Solanum tuberosum HOM05D000017 ORTHO05D013101 4.6e-09 65.1 54 57.4
Peaxi162Scf00147g00092 Petunia axillaris HOM05D000017 ORTHO05D001349 6.0e-09 64.7 88 46.6
Nitab4.5_0003187g0010 Nicotiana tabacum HOM05D000017 ORTHO05D001349 7.8e-09 64.3 66 56.1
Peaxi162Scf00111g01137 Petunia axillaris HOM05D000017 ORTHO05D001349 7.8e-09 64.3 75 48.0
Peaxi162Scf00256g00811 Petunia axillaris HOM05D000017 ORTHO05D001349 7.8e-09 64.3 75 48.0
Sopen01g006290 Solanum pennellii HOM05D000017 ORTHO05D013101 7.8e-09 64.3 55 56.4
Peaxi162Scf00098g01533 Petunia axillaris HOM05D000017 ORTHO05D001349 1.3e-08 63.5 75 46.7
Sopen07g029560 Solanum pennellii HOM05D000017 ORTHO05D013101 1.3e-08 63.5 58 51.7
Nitab4.5_0005049g0040 Nicotiana tabacum HOM05D000017 ORTHO05D001349 1.7e-08 63.2 74 44.6
Peaxi162Scf00234g00032 Petunia axillaris HOM05D000017 ORTHO05D001349 1.7e-08 63.2 83 41.0
Nitab4.5_0000685g0030 Nicotiana tabacum HOM05D000017 ORTHO05D009364 2.3e-08 62.8 57 50.9
Nitab4.5_0010397g0030 Nicotiana tabacum HOM05D000017 ORTHO05D001349 2.3e-08 62.8 50 62.0
Peaxi162Scf00164g01219 Petunia axillaris HOM05D000017 ORTHO05D001349 2.3e-08 62.8 71 49.3
Solyc08g150149.1 Solanum lycopersicum HOM05D000017 ORTHO05D013101 3.0e-08 62.4 54 55.6
Peaxi162Scf00068g02417 Petunia axillaris HOM05D000017 ORTHO05D030244 3.9e-08 62.0 56 53.6
Peaxi162Scf00434g00010 Petunia axillaris HOM05D000017 ORTHO05D305782 6.6e-08 61.2 51 56.9
Peaxi162Scf00112g00188 Petunia axillaris HOM05D000017 ORTHO05D001349 8.6e-08 60.8 65 50.8
Peaxi162Scf01050g00231 Petunia axillaris HOM05D000017 ORTHO05D001349 8.6e-08 60.8 75 46.7
PGSC0003DMG400039650 Solanum tuberosum HOM05D000017 ORTHO05D013101 8.6e-08 60.8 59 52.5
Nitab4.5_0001610g0050 Nicotiana tabacum HOM05D000017 ORTHO05D009364 1.1e-07 60.5 77 42.9
Peaxi162Scf00222g00240 Petunia axillaris HOM05D000017 ORTHO05D001349 1.1e-07 60.5 75 46.7
Peaxi162Scf00120g01531 Petunia axillaris HOM05D000017 ORTHO05D001349 1.5e-07 60.1 59 50.8
Nitab4.5_0012220g0010 Nicotiana tabacum HOM05D000017 ORTHO05D009364 1.9e-07 59.7 54 51.9
Solyc10g018207.1 Solanum lycopersicum HOM05D000017 ORTHO05D013101 1.9e-07 59.7 55 52.7
Nitab4.5_0000353g0040 Nicotiana tabacum HOM05D000017 ORTHO05D001349 2.5e-07 59.3 52 51.9
Sopen06g014720 Solanum pennellii HOM05D000017 ORTHO05D013101 2.5e-07 59.3 54 53.7
PGSC0003DMG400023085 Solanum tuberosum HOM05D000017 ORTHO05D013101 2.5e-07 59.3 61 50.8
Nitab4.5_0000231g0100 Nicotiana tabacum HOM05D000017 ORTHO05D001349 3.3e-07 58.9 60 55.0
Nitab4.5_0000768g0020 Nicotiana tabacum HOM05D000017 ORTHO05D009364 3.3e-07 58.9 81 40.7
Peaxi162Scf00036g00318 Petunia axillaris HOM05D000017 ORTHO05D009364 4.3e-07 58.5 64 45.3
Peaxi162Scf00194g00325 Petunia axillaris HOM05D000017 ORTHO05D001349 4.3e-07 58.5 75 45.3
Peaxi162Scf00647g00218 Petunia axillaris HOM05D000017 ORTHO05D306292 4.3e-07 58.5 61 52.5
PGSC0003DMG400036451 Solanum tuberosum HOM05D000017 ORTHO05D013101 4.3e-07 58.5 54 53.7
Nitab4.5_0002006g0120 Nicotiana tabacum HOM05D000017 ORTHO05D009364 5.6e-07 58.2 54 51.9
Peaxi162Scf00839g00023 Petunia axillaris HOM05D000017 ORTHO05D001349 5.6e-07 58.2 51 54.9
Nitab4.5_0000444g0290 Nicotiana tabacum HOM05D000017 ORTHO05D001349 7.3e-07 57.8 55 49.1
Nitab4.5_0001784g0030 Nicotiana tabacum HOM05D000017 ORTHO05D009364 7.3e-07 57.8 54 50.0
Nitab4.5_0002469g0060 Nicotiana tabacum HOM05D000017 ORTHO05D001349 7.3e-07 57.8 61 45.9
Nitab4.5_0022073g0010 Nicotiana tabacum HOM05D000017 ORTHO05D001349 9.5e-07 57.4 55 49.1
Peaxi162Scf00235g00210 Petunia axillaris HOM05D000017 ORTHO05D009364 9.5e-07 57.4 50 54.0
Peaxi162Scf00802g00027 Petunia axillaris HOM05D000017 ORTHO05D001349 9.5e-07 57.4 56 51.8
Nitab4.5_0006039g0020 Nicotiana tabacum HOM05D000017 ORTHO05D001349 1.6e-06 56.6 54 50.0
Nitab4.5_0027825g0010 Nicotiana tabacum HOM05D000017 ORTHO05D001349 1.6e-06 56.6 59 45.8
PGSC0003DMG400017611 Solanum tuberosum HOM05D000017 ORTHO05D001349 1.6e-06 56.6 56 51.8
Nitab4.5_0001601g0010 Nicotiana tabacum HOM05D000017 ORTHO05D001349 2.1e-06 56.2 60 53.3
Nitab4.5_0005340g0060 Nicotiana tabacum HOM05D000017 ORTHO05D001349 2.1e-06 56.2 55 50.9
Nitab4.5_0006080g0030 Nicotiana tabacum HOM05D000017 ORTHO05D001349 2.1e-06 56.2 84 36.9
Nitab4.5_0000792g0170 Nicotiana tabacum HOM05D000017 ORTHO05D009364 2.8e-06 55.8 61 52.5
Nitab4.5_0001058g0020 Nicotiana tabacum HOM05D052436 ORTHO05D283081 2.8e-06 55.8 68 77.9
Nitab4.5_0003883g0020 Nicotiana tabacum HOM05D000017 ORTHO05D001349 2.8e-06 55.8 84 38.1
Nitab4.5_0005529g0010 Nicotiana tabacum HOM05D000017 ORTHO05D001349 2.8e-06 55.8 69 47.8
Nitab4.5_0009037g0040 Nicotiana tabacum HOM05D000017 ORTHO05D009364 3.6e-06 55.5 55 47.3
Peaxi162Scf00363g00519 Petunia axillaris HOM05D000017 ORTHO05D009364 3.6e-06 55.5 61 44.3
Solyc05g047645.1 Solanum lycopersicum HOM05D000017 ORTHO05D009364 3.6e-06 55.5 57 52.6
Sopen11g009200 Solanum pennellii HOM05D000004 ORTHO05D000002 3.6e-06 55.5 57 52.6
Sopen12g023710 Solanum pennellii HOM05D000017 ORTHO05D000013 3.6e-06 55.5 55 49.1
Nitab4.5_0004706g0030 Nicotiana tabacum HOM05D000017 ORTHO05D009364 4.7e-06 55.1 52 50.0
Solyc03g096305.1 Solanum lycopersicum HOM05D000017 ORTHO05D001349 4.7e-06 55.1 67 46.3
Nitab4.5_0000427g0050 Nicotiana tabacum HOM05D000017 ORTHO05D009364 6.2e-06 54.7 47 48.9
Nitab4.5_0003938g0020 Nicotiana tabacum HOM05D000017 ORTHO05D015725 6.2e-06 54.7 60 53.3
Nitab4.5_0008038g0020 Nicotiana tabacum HOM05D000017 ORTHO05D009364 6.2e-06 54.7 52 51.9
Nitab4.5_0000022g0040 Nicotiana tabacum HOM05D000017 ORTHO05D001349 8.1e-06 54.3 61 49.2
Nitab4.5_0003726g0040 Nicotiana tabacum HOM05D000017 ORTHO05D001349 8.1e-06 54.3 50 56.0
Peaxi162Scf00365g00058 Petunia axillaris HOM05D000017 ORTHO05D001349 8.1e-06 54.3 56 46.4
Peaxi162Scf00375g00621 Petunia axillaris HOM05D000017 ORTHO05D001349 8.1e-06 54.3 89 42.7
Peaxi162Scf00408g00612 Petunia axillaris HOM05D000017 ORTHO05D001349 8.1e-06 54.3 98 41.8


User provided reference genes

Program Settings