Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0006409g0060 Nicotiana tabacum HOM05D000533 ORTHO05D001069 5.9e-35 150.2 71 100.0
Peaxi162Scf00030g02114 Petunia axillaris HOM05D000533 ORTHO05D001069 6.6e-34 146.7 70 97.1
Solyc00g500087.1 Solanum lycopersicum HOM05D000533 ORTHO05D001069 1.5e-33 145.6 70 95.7
Solyc00g500124.1 Solanum lycopersicum HOM05D000533 ORTHO05D001069 1.5e-33 145.6 70 95.7
Solyc00g500192.1 Solanum lycopersicum HOM05D000533 ORTHO05D001069 1.5e-33 145.6 70 95.7
PGSC0003DMG401008783 Solanum tuberosum HOM05D000533 ORTHO05D001069 1.2e-32 142.5 70 92.9
Peaxi162Scf01018g00211 Petunia axillaris HOM05D000533 ORTHO05D001069 2.1e-32 141.7 70 95.7
ATR0924G001 Amborella trichopoda HOM05D000533 ORTHO05D001069 2.8e-32 141.4 70 91.4
Nn1g08631 Nelumbo nucifera HOM05D000533 ORTHO05D001069 3.6e-32 141.0 70 90.0
EL10Ac1g02290 Beta vulgaris HOM05D000533 ORTHO05D001069 6.1e-32 140.2 70 90.0
EL10Ac6g14289 Beta vulgaris HOM05D000533 ORTHO05D001069 6.1e-32 140.2 70 90.0
EL10Ac9g21011 Beta vulgaris HOM05D000533 ORTHO05D001069 6.1e-32 140.2 70 90.0
HanXRQChr00c0336g0573701 Helianthus annuus HOM05D000533 ORTHO05D001069 6.1e-32 140.2 70 91.4
HanXRQChr02g0059741 Helianthus annuus HOM05D000533 ORTHO05D001069 6.1e-32 140.2 70 91.4
HanXRQChr09g0258481 Helianthus annuus HOM05D000533 ORTHO05D001069 6.1e-32 140.2 70 91.4
HanXRQChr15g0465421 Helianthus annuus HOM05D000533 ORTHO05D001069 6.1e-32 140.2 70 91.4
HanXRQChr15g0465471 Helianthus annuus HOM05D000533 ORTHO05D001069 6.1e-32 140.2 70 91.4
HanXRQChr17g0569711 Helianthus annuus HOM05D000533 ORTHO05D001069 6.1e-32 140.2 70 91.4
HanXRQChr17g0569761 Helianthus annuus HOM05D000533 ORTHO05D001069 6.1e-32 140.2 70 91.4
HanXRQCPg0580331 Helianthus annuus HOM05D000533 ORTHO05D001069 6.1e-32 140.2 70 91.4
PSO548G0122 Papaver somniferum HOM05D000533 ORTHO05D001069 8.0e-32 139.8 69 91.3
RhsimPtG0005000 Rhododendron simsii HOM05D000533 ORTHO05D001069 8.0e-32 139.8 70 90.0
TAR625G0265 Trochodendron aralioides HOM05D000533 ORTHO05D001069 8.0e-32 139.8 70 90.0
vmacro22393 Vaccinium macrocarpon HOM05D000533 ORTHO05D001069 8.0e-32 139.8 70 90.0
vmacro22419 Vaccinium macrocarpon HOM05D000533 ORTHO05D001069 8.0e-32 139.8 70 90.0
HanXRQChr09g0251511 Helianthus annuus HOM05D000533 ORTHO05D001069 1.0e-31 139.4 70 91.4
ECA074G0013 Erigeron canadensis HOM05D000533 ORTHO05D001069 1.4e-31 139.0 70 90.0
QL93p0141_0008 Quercus lobata HOM05D000533 ORTHO05D001069 1.4e-31 139.0 70 88.6
PGR111G0062 Punica granatum HOM05D000533 ORTHO05D001069 1.8e-31 138.7 70 88.6
FvH4_6g41620 Fragaria vesca HOM05D000533 ORTHO05D001069 2.3e-31 138.3 70 90.0
FvH4_c3g00020 Fragaria vesca HOM05D000533 ORTHO05D001069 2.3e-31 138.3 70 90.0
FAN01G2373 Fragaria x ananassa HOM05D000533 ORTHO05D001069 2.3e-31 138.3 70 90.0
Gohir.1Z049694 Gossypium hirsutum HOM05D000533 ORTHO05D001069 2.3e-31 138.3 70 88.6
Lsat_1_v5_gn_4_33860 Lactuca sativa HOM05D000533 ORTHO05D001069 2.3e-31 138.3 70 90.0
Lsat_1_v5_gn_9_115440 Lactuca sativa HOM05D000533 ORTHO05D001069 2.3e-31 138.3 70 90.0
Lsat_1_v5_gn_9_49240 Lactuca sativa HOM05D000533 ORTHO05D001069 2.3e-31 138.3 70 90.0
Sed0009234 Sechium edule HOM05D000533 ORTHO05D001069 4.0e-31 137.5 70 88.6
Sed0014804 Sechium edule HOM05D000533 ORTHO05D001069 4.0e-31 137.5 70 88.6
Ah.10g027260 Amaranthus hybridus HOM05D000533 ORTHO05D001069 6.8e-31 136.7 70 87.1
Ah.10g027700 Amaranthus hybridus HOM05D000533 ORTHO05D001069 6.8e-31 136.7 70 87.1
AUR62028573 Chenopodium quinoa HOM05D000533 ORTHO05D001069 6.8e-31 136.7 70 87.1
SabraPtG0005900 Salix brachista HOM05D000533 ORTHO05D001069 6.8e-31 136.7 69 88.4
DCAR_032542 Daucus carota HOM05D000533 ORTHO05D001069 1.2e-30 136.0 70 88.6
Nitab4.5_0007400g0040 Nicotiana tabacum HOM05D000533 ORTHO05D001069 1.2e-30 136.0 70 88.6
Hma1.2p1_0660F.1_g197430 Hydrangea macrophylla HOM05D000533 ORTHO05D001069 1.5e-30 135.6 70 87.1
AUR62015545 Chenopodium quinoa HOM05D000533 ORTHO05D001069 2.0e-30 135.2 70 85.7
Medtr4g006100 Medicago truncatula HOM05D000533 ORTHO05D001069 2.6e-30 134.8 70 87.1
Medtr6g042200 Medicago truncatula HOM05D000533 ORTHO05D001069 2.6e-30 134.8 70 87.1
Nitab4.5_0006502g0030 Nicotiana tabacum HOM05D000533 ORTHO05D001069 2.6e-30 134.8 70 88.6
Gohir.D11G334151 Gossypium hirsutum HOM05D000533 ORTHO05D001069 3.4e-30 134.4 70 85.7
SalBow1G1175 Salvia bowleyana HOM05D000533 ORTHO05D001069 4.4e-30 134.0 69 87.0
ATR0043G018 Amborella trichopoda HOM05D000533 ORTHO05D001069 5.8e-30 133.7 69 87.0
MELO3C027054.2 Cucumis melo HOM05D000533 ORTHO05D001069 5.8e-30 133.7 70 85.7
Sabra10G0056200 Salix brachista HOM05D000533 ORTHO05D001069 5.8e-30 133.7 69 87.0
LjContig00318g0022363 Lotus japonicus HOM05D000533 ORTHO05D001069 7.5e-30 133.3 70 85.7
LjContig00319g0004717 Lotus japonicus HOM05D000533 ORTHO05D001069 7.5e-30 133.3 70 85.7
Haze_22013 Corylus avellana HOM05D000001 ORTHO05D000003 9.8e-30 132.9 70 87.1
Eucgr.K01620 Eucalyptus grandis HOM05D000533 ORTHO05D001069 9.8e-30 132.9 69 85.5
AUR62043262 Chenopodium quinoa HOM05D000533 ORTHO05D001069 1.3e-29 132.5 70 84.3
unitig_91.g26523 Utricularia gibba HOM05D000533 ORTHO05D001069 1.3e-29 132.5 69 82.6
Lju5009C0T5 Lonicera japonica HOM05D000533 ORTHO05D001069 1.7e-29 132.1 70 85.7
Lalb_Chr07g0191821 Lupinus albus HOM05D000533 ORTHO05D001069 1.7e-29 132.1 69 87.0
Psat0s6989g0240 Pisum sativum HOM05D000533 ORTHO05D001069 1.7e-29 132.1 70 84.3
Psat1g050080 Pisum sativum HOM05D000533 ORTHO05D001069 1.7e-29 132.1 70 84.3
Psat3g095040 Pisum sativum HOM05D000533 ORTHO05D001069 1.7e-29 132.1 70 84.3
Psat7g126800 Pisum sativum HOM05D000533 ORTHO05D001069 1.7e-29 132.1 70 84.3
Psat7g150960 Pisum sativum HOM05D000533 ORTHO05D001069 1.7e-29 132.1 70 84.3
arahy.Tifrunner.gnm1.ann1.URY1CV Arachis hypogaea HOM05D000533 ORTHO05D011117 2.2e-29 131.7 70 85.7
arahy.Tifrunner.gnm1.ann1.V68ACY Arachis hypogaea HOM05D000533 ORTHO05D001069 2.2e-29 131.7 70 85.7
AL9U11960 Arabidopsis lyrata HOM05D000533 ORTHO05D001069 4.9e-29 130.6 69 82.6
C05p53840 Brassica napus HOM05D000533 ORTHO05D001069 4.9e-29 130.6 69 82.6
C07p33470 Brassica napus HOM05D000533 ORTHO05D001069 4.9e-29 130.6 69 82.6
C09p40300 Brassica napus HOM05D000533 ORTHO05D001069 4.9e-29 130.6 69 82.6
BolC2t10601H Brassica oleracea HOM05D000533 ORTHO05D001069 4.9e-29 130.6 69 82.6
BolSC29t60510H Brassica oleracea HOM05D000533 ORTHO05D001069 4.9e-29 130.6 69 82.6
BolSC35t60708H Brassica oleracea HOM05D000533 ORTHO05D001069 4.9e-29 130.6 69 82.6
BolSC37t60797H Brassica oleracea HOM05D000533 ORTHO05D001069 4.9e-29 130.6 69 82.6
BolSC44t60826H Brassica oleracea HOM05D000533 ORTHO05D001069 4.9e-29 130.6 69 82.6
BolSC45t60905H Brassica oleracea HOM05D000533 ORTHO05D001069 4.9e-29 130.6 69 82.6
BraSC143t45656Z Brassica rapa HOM05D000533 ORTHO05D001069 4.9e-29 130.6 69 82.6
BraSC25t45914Z Brassica rapa HOM05D000533 ORTHO05D001069 4.9e-29 130.6 69 82.6
BraSC59t46530Z Brassica rapa HOM05D000533 ORTHO05D001069 4.9e-29 130.6 69 82.6
BraSC59t46554Z Brassica rapa HOM05D000533 ORTHO05D001069 4.9e-29 130.6 69 82.6
ATCG01110 Arabidopsis thaliana HOM05D000533 ORTHO05D001069 6.4e-29 130.2 69 81.2
arahy.Tifrunner.gnm1.ann1.EMA6B0 Arachis hypogaea HOM05D000533 ORTHO05D001069 6.4e-29 130.2 70 84.3
Medtr0002s0150 Medicago truncatula HOM05D000533 ORTHO05D001069 8.3e-29 129.8 70 81.4
SEGI_11816 Sequoiadendron giganteum HOM05D000533 ORTHO05D001069 8.3e-29 129.8 70 81.4
SEGI_26586 Sequoiadendron giganteum HOM05D000533 ORTHO05D001069 8.3e-29 129.8 70 81.4
SEGI_36880 Sequoiadendron giganteum HOM05D000533 ORTHO05D001069 8.3e-29 129.8 70 81.4
SEGI_41539 Sequoiadendron giganteum HOM05D000533 ORTHO05D001069 8.3e-29 129.8 70 81.4
C09p40120 Brassica napus HOM05D000890 ORTHO05D000697 4.1e-28 127.5 69 81.2
GSVIVG01012613001 Vitis vinifera HOM05D000533 ORTHO05D001069 4.1e-28 127.5 70 81.4
CAN.G30.7 Capsicum annuum HOM05D000533 ORTHO05D001069 7.0e-28 126.7 70 82.9
BolSC29t60550H Brassica oleracea HOM05D000533 ORTHO05D001069 2.0e-27 125.2 71 80.3
Mapoly0048s0043 Marchantia polymorpha HOM05D000533 ORTHO05D001069 2.0e-27 125.2 69 78.3
Psat0s1920g0160 Pisum sativum HOM05D000533 ORTHO05D001069 1.7e-26 122.1 70 78.6
Atru.chr5.1326 Acer truncatum HOM05D000533 ORTHO05D001069 2.3e-26 121.7 61 90.2
A08p24980 Brassica napus HOM05D000533 ORTHO05D001069 2.3e-26 121.7 69 76.8
BraA08t34453Z Brassica rapa HOM05D000533 ORTHO05D001069 2.3e-26 121.7 69 76.8
Psat5g037800 Pisum sativum HOM05D000533 ORTHO05D001069 3.9e-26 120.9 70 77.1
BolSC49t61147H Brassica oleracea HOM05D000533 ORTHO05D001069 7.3e-25 116.7 63 81.0
Eucgr.B00847 Eucalyptus grandis HOM05D000533 ORTHO05D001069 3.6e-24 114.4 69 75.4
Nitab4.5_0000843g0020 Nicotiana tabacum HOM05D000533 ORTHO05D001069 4.7e-24 114.0 63 85.7
MELO3C031837.2 Cucumis melo HOM05D000533 ORTHO05D001069 8.0e-24 113.2 70 75.7
CAN.G615.5 Capsicum annuum HOM05D000533 ORTHO05D001069 1.8e-23 112.1 63 81.0
Gorai.006G101200 Gossypium raimondii HOM05D000533 ORTHO05D001069 5.2e-23 110.5 70 72.9
Hund28343 Selenicereus undatus HOM05D000533 ORTHO05D001069 5.2e-23 110.5 67 77.6
Hund29094 Selenicereus undatus HOM05D000533 ORTHO05D001069 5.2e-23 110.5 67 77.6
Hund30925 Selenicereus undatus HOM05D000533 ORTHO05D001069 5.2e-23 110.5 67 77.6
Gohir.D08G207450 Gossypium hirsutum HOM05D000533 ORTHO05D001069 6.8e-23 110.2 62 80.6
arahy.Tifrunner.gnm1.ann1.JUM97N Arachis hypogaea HOM05D000533 ORTHO05D001069 8.9e-23 109.8 69 76.8
Psat0s1160g0400 Pisum sativum HOM05D000533 ORTHO05D002807 1.2e-22 109.4 58 82.8
Gohir.D09G085250 Gossypium hirsutum HOM05D000533 ORTHO05D001069 4.4e-22 107.5 70 70.0
SMO086G0065 Selaginella moellendorffii HOM05D000533 ORTHO05D001069 9.8e-22 106.3 69 71.0
HanXRQChr17g0557731 Helianthus annuus HOM05D000533 ORTHO05D001069 1.6e-19 99.0 55 80.0
ClCG10G006000 Citrullus lanatus HOM05D000533 ORTHO05D001069 7.8e-19 96.7 70 67.1
Psat0s1160g0320 Pisum sativum HOM05D000533 ORTHO05D001069 1.0e-18 96.3 70 65.7
HanXRQChr01g0000271 Helianthus annuus HOM05D000533 ORTHO05D001069 2.3e-18 95.1 48 89.6
Gorai.003G071300 Gossypium raimondii HOM05D000533 ORTHO05D001069 6.6e-18 93.6 52 78.8
Psat7g199400 Pisum sativum HOM05D000533 ORTHO05D001069 1.1e-17 92.8 53 77.4
Migut.D01248 Erythranthe guttata HOM05D000533 ORTHO05D001069 3.3e-17 91.3 70 62.9
Lsat_1_v5_gn_5_821 Lactuca sativa HOM05D000533 ORTHO05D001069 4.3e-17 90.9 70 68.6
Nitab4.5_0000660g0050 Nicotiana tabacum HOM05D000533 ORTHO05D001069 1.6e-16 89.0 44 95.5
Gorai.013G076700 Gossypium raimondii HOM05D000533 ORTHO05D001069 2.8e-16 88.2 51 76.5
arahy.Tifrunner.gnm1.ann1.G8ZYC2 Arachis hypogaea HOM05D000533 ORTHO05D001069 3.1e-15 84.7 43 90.7
Nitab4.5_0000003g0640 Nicotiana tabacum HOM05D000533 ORTHO05D001069 8.9e-15 83.2 60 70.0
Solyc10g047400.1 Solanum lycopersicum HOM05D000533 ORTHO05D001069 3.4e-14 81.3 46 78.3
Medtr8g035600 Medicago truncatula HOM05D000533 ORTHO05D001069 2.9e-13 78.2 40 80.0
TPR.G34758 Trifolium pratense HOM05D000188 ORTHO05D000362 2.9e-13 78.2 39 84.6
Peaxi162Scf00654g00052 Petunia axillaris HOM05D000533 ORTHO05D001069 1.4e-12 75.9 57 68.4
HanXRQChr00c0504g0575321 Helianthus annuus HOM05D000533 ORTHO05D001069 2.4e-12 75.1 40 87.5
Gohir.A13G086335 Gossypium hirsutum HOM05D000533 ORTHO05D001069 4.1e-12 74.3 70 55.7
CAN.G1045.9 Capsicum annuum HOM05D000533 ORTHO05D001069 9.2e-12 73.2 70 55.7
Gohir.A04G053078 Gossypium hirsutum HOM05D000533 ORTHO05D001069 1.2e-11 72.8 37 78.4
Cpa.g.sc519.6 Carica papaya HOM05D000533 ORTHO05D001069 4.6e-11 70.9 33 87.9
BraSC138t45531Z Brassica rapa HOM05D000533 ORTHO05D001069 1.0e-10 69.7 40 75.0
Haze_26686 Corylus avellana HOM05D000533 ORTHO05D001069 1.7e-10 68.9 63 47.6
Lj2C1238G31 Lonicera japonica HOM05D000533 ORTHO05D001069 3.9e-10 67.8 33 84.8
C02p28810 Brassica napus HOM05D000533 ORTHO05D001069 8.6e-10 66.6 40 75.0
CAN.G965.3 Capsicum annuum HOM05D000533 ORTHO05D001069 1.1e-09 66.2 30 93.3
Cre09.g405850 Chlamydomonas reinhardtii HOM05D000533 ORTHO05D001069 2.5e-09 65.1 67 44.8
PRCOL_00000735 Prasinoderma coloniale HOM05D000533 ORTHO05D001069 4.3e-09 64.3 66 43.9
Mapoly0011s0058 Marchantia polymorpha HOM05D000533 ORTHO05D001069 7.3e-09 63.5 63 46.0
Solyc08g022150.2 Solanum lycopersicum HOM05D000533 ORTHO05D001069 9.5e-09 63.2 35 82.9
Sc02g0003420 Simmondsia chinensis HOM05D000533 ORTHO05D001069 2.1e-08 62.0 32 78.1
CAN.G127.9 Capsicum annuum HOM05D000533 ORTHO05D001069 3.6e-08 61.2 37 81.1
ATR1208G001 Amborella trichopoda HOM05D000533 ORTHO05D001069 8.1e-08 60.1 63 42.9
Gohir.1Z050466 Gossypium hirsutum HOM05D000533 ORTHO05D001069 8.1e-08 60.1 28 85.7
Nitab4.5_0001478g0210 Nicotiana tabacum HOM05D000445 ORTHO05D000314 8.1e-08 60.1 34 79.4
CANSAT16G0052 Cannabis sativa HOM05D000533 ORTHO05D001069 1.1e-07 59.7 63 42.9
FvH4_2g05080 Fragaria vesca HOM05D000533 ORTHO05D001069 1.1e-07 59.7 63 42.9
FvH4_c1g00130 Fragaria vesca HOM05D000533 ORTHO05D001069 1.1e-07 59.7 63 42.9
FAN20G0581 Fragaria x ananassa HOM05D000533 ORTHO05D001069 1.1e-07 59.7 63 42.9
RcHm_v2.0_MTg0498261 Rosa chinensis HOM05D000533 ORTHO05D001069 1.1e-07 59.7 63 42.9
ATR1155G032 Amborella trichopoda HOM05D000533 ORTHO05D001069 1.4e-07 59.3 63 44.4
BolC2t08926H Brassica oleracea HOM05D000533 ORTHO05D001069 1.4e-07 59.3 31 74.2
CSS0030738 Camellia sinensis var. sinensis HOM05D000533 ORTHO05D001069 2.4e-07 58.5 30 90.0
Cfa022526 Carpinus fangiana HOM05D000533 ORTHO05D001069 2.4e-07 58.5 64 40.6
SEGI_01046 Sequoiadendron giganteum HOM05D000533 ORTHO05D001069 2.4e-07 58.5 63 42.9
SEGI_25166 Sequoiadendron giganteum HOM05D000533 ORTHO05D001069 2.4e-07 58.5 63 42.9
Solyc07g032430.1 Solanum lycopersicum HOM05D000533 ORTHO05D001069 2.4e-07 58.5 37 73.0
AagrBONN_evm.TU.Sc2ySwM_117.4105 Anthoceros agrestis HOM05D000533 ORTHO05D001069 3.1e-07 58.2 63 39.7
CAN.G1.13 Capsicum annuum HOM05D000533 ORTHO05D001069 3.1e-07 58.2 63 44.4
Lj2A1229G104 Lonicera japonica HOM05D000533 ORTHO05D001069 6.8e-07 57.0 63 41.3
Haze_27200 Corylus avellana HOM05D000533 ORTHO05D001069 8.9e-07 56.6 62 38.7
Peaxi162Scf00197g00027 Petunia axillaris HOM05D000533 ORTHO05D001069 8.9e-07 56.6 63 41.3
Peaxi162Scf00864g00009 Petunia axillaris HOM05D000533 ORTHO05D001069 8.9e-07 56.6 63 41.3
Solyc00g500184.1 Solanum lycopersicum HOM05D000533 ORTHO05D001069 8.9e-07 56.6 63 41.3
Sopen05g012860 Solanum pennellii HOM05D000533 ORTHO05D001069 8.9e-07 56.6 63 41.3
unitig_87.g27981 Utricularia gibba HOM05D000533 ORTHO05D001069 8.9e-07 56.6 63 41.3
SalBow1G6484 Salvia bowleyana HOM05D000533 ORTHO05D001069 1.5e-06 55.8 63 41.3
SGA_v2.0_scaffold400G50831 Striga asiatica HOM05D000533 ORTHO05D001069 2.0e-06 55.5 63 41.3
CAN.G566.26 Capsicum annuum HOM05D000533 ORTHO05D001069 2.6e-06 55.1 63 41.3
Nitab4.5_0000681g0090 Nicotiana tabacum HOM05D000533 ORTHO05D001069 3.4e-06 54.7 25 100.0
Solyc11g021237.1 Solanum lycopersicum HOM05D000533 ORTHO05D001069 3.4e-06 54.7 30 83.3
Sopen00g005020 Solanum pennellii HOM05D014432 ORTHO05D016892 3.4e-06 54.7 26 84.6
PGSC0003DMG400030943 Solanum tuberosum HOM05D000533 ORTHO05D001069 3.4e-06 54.7 63 39.7
Nitab4.5_0004030g0010 Nicotiana tabacum HOM05D000533 ORTHO05D001069 4.4e-06 54.3 63 39.7
COL.COLO4_01459 Corchorus olitorius HOM05D000533 ORTHO05D001069 5.8e-06 53.9 63 42.9


User provided reference genes

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