Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0006408g0020 Nicotiana tabacum HOM05D006119 ORTHO05D007641 1.6e-51 205.7 93 100.0
Sopen07g001370 Solanum pennellii HOM05D006119 ORTHO05D007641 2.5e-41 171.8 89 87.6
Nitab4.5_0004815g0030 Nicotiana tabacum HOM05D006119 ORTHO05D007641 4.3e-41 171.0 109 77.1
PGSC0003DMG400011173 Solanum tuberosum HOM05D006119 ORTHO05D007641 7.3e-41 170.2 89 86.5
Peaxi162Scf00347g01022 Petunia axillaris HOM05D006119 ORTHO05D007641 1.6e-40 169.1 87 85.1
Oeu038007.1 Olea europaea HOM05D006119 ORTHO05D007641 3.6e-40 167.9 89 85.4
Solyc07g005410.3 Solanum lycopersicum HOM05D006119 ORTHO05D007641 4.7e-40 167.5 89 85.4
Migut.K00337 Erythranthe guttata HOM05D006119 ORTHO05D007641 1.8e-39 165.6 89 83.1
SGA_v2.0_scaffold206G41813 Striga asiatica HOM05D006119 ORTHO05D007641 8.9e-39 163.3 89 82.0
TAR626G1228 Trochodendron aralioides HOM05D006119 ORTHO05D007641 1.7e-37 159.1 85 82.4
Gorai.009G055300 Gossypium raimondii HOM05D006119 ORTHO05D007641 3.7e-37 157.9 89 77.5
CSS0002774 Camellia sinensis var. sinensis HOM05D006119 ORTHO05D007641 6.4e-37 157.1 86 80.2
CSS0027400 Camellia sinensis var. sinensis HOM05D006119 ORTHO05D007641 6.4e-37 157.1 86 80.2
Lsat_1_v5_gn_5_91501 Lactuca sativa HOM05D006119 ORTHO05D007641 1.1e-36 156.4 87 81.6
RhsimUnG0039700 Rhododendron simsii HOM05D006119 ORTHO05D007641 1.4e-36 156.0 86 81.4
HPP92_017474 Vanilla planifolia HOM05D006119 ORTHO05D007641 9.2e-36 153.3 86 74.4
Hma1.2p1_0028F.1_g017420 Hydrangea macrophylla HOM05D006119 ORTHO05D007641 1.2e-35 152.9 86 76.7
Thecc.09G032800 Theobroma cacao HOM05D006119 ORTHO05D007641 1.6e-35 152.5 89 74.2
vmacro06086 Vaccinium macrocarpon HOM05D006119 ORTHO05D007641 1.6e-35 152.5 85 80.0
TAR625G1054 Trochodendron aralioides HOM05D006119 ORTHO05D007641 2.0e-35 152.1 85 78.8
arahy.Tifrunner.gnm1.ann1.I28AR0 Arachis hypogaea HOM05D006119 ORTHO05D007641 3.5e-35 151.4 86 76.7
CiPaw.15G174900 Carya illinoinensis HOM05D006119 ORTHO05D007641 3.5e-35 151.4 87 74.7
CDE05G1219 Ceratophyllum demersum HOM05D006119 ORTHO05D007641 4.6e-35 151.0 86 74.4
Aqoxy7G03440 Aquilegia oxysepala HOM05D006119 ORTHO05D007641 6.0e-35 150.6 83 80.7
Hund00673 Selenicereus undatus HOM05D006119 ORTHO05D007641 7.8e-35 150.2 87 75.9
Actinidia23551 Actinidia chinensis HOM05D006119 ORTHO05D007641 1.0e-34 149.8 86 76.7
Zm00001eb041130 Zea mays HOM05D006119 ORTHO05D007641 1.0e-34 149.8 85 75.3
PGR102G3064 Punica granatum HOM05D006119 ORTHO05D007641 1.7e-34 149.1 86 74.4
arahy.Tifrunner.gnm1.ann1.TAM15G Arachis hypogaea HOM05D006119 ORTHO05D007641 3.0e-34 148.3 85 76.5
MBI15_g26716_MAGBIO Magnolia biondii HOM05D006119 ORTHO05D007641 6.6e-34 147.1 87 74.7
Cfa020842 Carpinus fangiana HOM05D006119 ORTHO05D007641 8.6e-34 146.7 87 72.4
Ca_21116_v3 Cicer arietinum L. HOM05D006119 ORTHO05D007641 8.6e-34 146.7 89 73.0
Haze_19227 Corylus avellana HOM05D006119 ORTHO05D007641 8.6e-34 146.7 87 72.4
Manes.06G037000 Manihot esculenta HOM05D006119 ORTHO05D007641 8.6e-34 146.7 89 73.0
PSO111G0054 Papaver somniferum HOM05D006119 ORTHO05D007641 8.6e-34 146.7 86 74.4
PSO561G0054 Papaver somniferum HOM05D006119 ORTHO05D007641 1.1e-33 146.4 86 74.4
Sopen12g005020 Solanum pennellii HOM05D006119 ORTHO05D007641 1.1e-33 146.4 74 86.5
Actinidia38675 Actinidia chinensis HOM05D006119 ORTHO05D007641 1.9e-33 145.6 86 73.3
PGSC0003DMG400007897 Solanum tuberosum HOM05D006119 ORTHO05D007641 3.3e-33 144.8 74 85.1
Peaxi162Scf00062g00419 Petunia axillaris HOM05D006119 ORTHO05D007641 5.6e-33 144.1 74 85.1
Solyc12g010150.3 Solanum lycopersicum HOM05D006119 ORTHO05D007641 5.6e-33 144.1 73 86.3
CARHR271810 Cardamine hirsuta HOM05D006119 ORTHO05D007641 9.5e-33 143.3 86 70.9
Os08g0441400 Oryza sativa ssp. japonica HOM05D006119 ORTHO05D007641 9.5e-33 143.3 85 71.8
Potri.006G186500 Populus trichocarpa HOM05D006119 ORTHO05D007641 9.5e-33 143.3 89 70.8
BcaB01g04471 Brassica carinata HOM05D006119 ORTHO05D007641 1.6e-32 142.5 89 68.5
A03p12450 Brassica napus HOM05D000882 ORTHO05D001142 1.6e-32 142.5 89 68.5
C03p14650 Brassica napus HOM05D006119 ORTHO05D007641 1.6e-32 142.5 89 68.5
BolC3t13907H Brassica oleracea HOM05D000882 ORTHO05D001142 1.6e-32 142.5 89 68.5
BraA03t10560Z Brassica rapa HOM05D000882 ORTHO05D001142 1.6e-32 142.5 89 68.5
ATR0739G093 Amborella trichopoda HOM05D006119 ORTHO05D007641 2.1e-32 142.1 86 69.8
AL8G34100 Arabidopsis lyrata HOM05D006119 ORTHO05D007641 2.1e-32 142.1 89 68.5
AT5G58005 Arabidopsis thaliana HOM05D006119 ORTHO05D007641 2.1e-32 142.1 89 68.5
Carub.0008s1855 Capsella rubella HOM05D006119 ORTHO05D007641 2.1e-32 142.1 89 68.5
QL02p092825 Quercus lobata HOM05D006119 ORTHO05D007641 2.1e-32 142.1 85 70.6
Sabra18G0092300 Salix brachista HOM05D006119 ORTHO05D007641 2.1e-32 142.1 89 69.7
ClCG06G012280 Citrullus lanatus HOM05D006119 ORTHO05D007641 3.6e-32 141.4 87 69.0
Aa31LG3G13820 Aethionema arabicum HOM05D006119 ORTHO05D007641 8.1e-32 140.2 86 69.8
Rhsim03G0256600 Rhododendron simsii HOM05D006119 ORTHO05D007641 8.1e-32 140.2 102 67.6
CAN.G1116.12 Capsicum annuum HOM05D006119 ORTHO05D007641 1.1e-31 139.8 73 84.9
Oeu021261.1 Olea europaea HOM05D006119 ORTHO05D007641 1.1e-31 139.8 73 83.6
Eucgr.L03135 Eucalyptus grandis HOM05D006119 ORTHO05D007641 1.4e-31 139.4 89 66.3
Lj4g0015042 Lotus japonicus HOM05D006119 ORTHO05D007641 1.4e-31 139.4 86 72.1
ECA234G1280 Erigeron canadensis HOM05D006119 ORTHO05D007641 1.8e-31 139.0 80 76.2
Thhalv10015049m.g Eutrema salsugineum HOM05D006119 ORTHO05D007641 1.8e-31 139.0 86 68.6
Eucgr.C02591 Eucalyptus grandis HOM05D006119 ORTHO05D007641 2.3e-31 138.7 89 66.3
GSVIVG01023584001 Vitis vinifera HOM05D006119 ORTHO05D007641 3.1e-31 138.3 74 81.1
Cc06_g15170 Coffea canephora HOM05D006119 ORTHO05D007641 4.0e-31 137.9 74 79.7
Manes.14G112500 Manihot esculenta HOM05D006119 ORTHO05D007641 4.0e-31 137.9 89 68.5
DCAR_020878 Daucus carota HOM05D006119 ORTHO05D007641 5.2e-31 137.5 81 76.5
Dinv42873 Davidia involucrata HOM05D006119 ORTHO05D007641 5.2e-31 137.5 74 81.1
Dinv43227 Davidia involucrata HOM05D006119 ORTHO05D007641 5.2e-31 137.5 74 81.1
Potri.018G109400 Populus trichocarpa HOM05D006119 ORTHO05D007641 5.2e-31 137.5 89 67.4
Ciclev10009941m.g Citrus clementina HOM05D006119 ORTHO05D007641 8.9e-31 136.7 87 70.1
Medtr4g131150 Medicago truncatula HOM05D006119 ORTHO05D007641 1.2e-30 136.3 87 70.1
FAN19G0026 Fragaria x ananassa HOM05D006119 ORTHO05D007641 1.5e-30 136.0 88 67.0
FvH4_1g01100 Fragaria vesca HOM05D006119 ORTHO05D007641 2.0e-30 135.6 87 67.8
FAN23G1211 Fragaria x ananassa HOM05D006119 ORTHO05D007641 2.0e-30 135.6 87 67.8
FAN26G3335 Fragaria x ananassa HOM05D006119 ORTHO05D007641 2.0e-30 135.6 87 67.8
SalBow1G1238 Salvia bowleyana HOM05D006119 ORTHO05D007641 2.0e-30 135.6 74 78.4
FAN28G1026 Fragaria x ananassa HOM05D006119 ORTHO05D007641 2.6e-30 135.2 87 67.8
Glyma.17G075100 Glycine max HOM05D006119 ORTHO05D007641 2.6e-30 135.2 85 71.8
MSTRG.26287 Avicennia marina HOM05D006119 ORTHO05D007641 7.5e-30 133.7 74 78.4
Sed0003082 Sechium edule HOM05D006119 ORTHO05D007641 7.5e-30 133.7 86 65.1
Actinidia04288 Actinidia chinensis HOM05D006119 ORTHO05D007641 1.7e-29 132.5 74 77.0
MELO3C029440.2 Cucumis melo HOM05D006119 ORTHO05D007641 3.7e-29 131.3 97 61.9
Atru.chr7.85 Acer truncatum HOM05D006119 ORTHO05D007641 4.9e-29 131.0 82 70.7
Rhsim01G0035400 Rhododendron simsii HOM05D006119 ORTHO05D007641 4.9e-29 131.0 78 75.6
Nn8g39847 Nelumbo nucifera HOM05D006119 ORTHO05D007641 6.4e-29 130.6 74 77.0
Gohir.A05G052000 Gossypium hirsutum HOM05D006119 ORTHO05D007641 1.4e-28 129.4 74 75.7
Gohir.D05G053500 Gossypium hirsutum HOM05D006119 ORTHO05D007641 1.4e-28 129.4 74 75.7
Sed0018834 Sechium edule HOM05D006119 ORTHO05D007641 1.4e-28 129.4 87 62.1
TPR.G39188 Trifolium pratense HOM05D006119 ORTHO05D007641 9.2e-28 126.7 87 67.8
Duzib187G0693 Durio zibethinus HOM05D006119 ORTHO05D007641 1.2e-27 126.3 78 69.2
Glyma.02G202700 Glycine max HOM05D006119 ORTHO05D007641 1.6e-27 125.9 74 74.3
unitig_899.g15448 Utricularia gibba HOM05D006119 ORTHO05D007641 1.6e-27 125.9 74 73.0
AUR62043251 Chenopodium quinoa HOM05D006119 ORTHO05D007641 6.0e-27 124.0 88 62.5
COL.COLO4_18789 Corchorus olitorius HOM05D006119 ORTHO05D007641 6.0e-27 124.0 80 63.8
Cpa.g.sc46.139 Carica papaya HOM05D006119 ORTHO05D007641 1.7e-26 122.5 74 70.3
Lalb_Chr07g0179791 Lupinus albus HOM05D006119 ORTHO05D007641 1.7e-26 122.5 74 71.6
Sc18g0007620 Simmondsia chinensis HOM05D006119 ORTHO05D007641 3.0e-26 121.7 73 72.6
TWI63G1376 Tripterygium wilfordii HOM05D006119 ORTHO05D007641 3.0e-26 121.7 74 70.3
Nitab4.5_0002315g0130 Nicotiana tabacum HOM05D006119 ORTHO05D007641 1.1e-25 119.8 82 68.3
Psat0ss6646g0160 Pisum sativum HOM05D006119 ORTHO05D007641 1.5e-25 119.4 74 70.3
Nitab4.5_0001478g0060 Nicotiana tabacum HOM05D006119 ORTHO05D007641 3.3e-25 118.2 83 68.7
Phvul.003G157000 Phaseolus vulgaris HOM05D006119 ORTHO05D007641 2.1e-24 115.5 74 66.2
Aqoxy4G01852 Aquilegia oxysepala HOM05D006119 ORTHO05D007641 1.1e-23 113.2 69 75.4
CsaV3_1G028790 Cucumis sativus L. HOM05D006119 ORTHO05D007641 1.4e-23 112.8 73 64.4
CANSAT11G0807 Cannabis sativa HOM05D006119 ORTHO05D007641 1.8e-23 112.5 74 64.9
Nitab4.5_0001813g0020 Nicotiana tabacum HOM05D006119 ORTHO05D007641 1.8e-23 112.5 77 62.3
Prupe.7G260900 Prunus persica HOM05D006119 ORTHO05D007641 1.5e-22 109.4 74 62.2
MD15G1154500 Malus domestica HOM05D006119 ORTHO05D007641 2.0e-22 109.0 74 60.8
Nitab4.5_0013449g0010 Nicotiana tabacum HOM05D006119 ORTHO05D007641 2.0e-22 109.0 62 75.8
EL10Ac8g18851 Beta vulgaris HOM05D006119 ORTHO05D007641 3.4e-22 108.2 73 64.4
Mapoly0012s0137 Marchantia polymorpha HOM05D006119 ORTHO05D007641 7.6e-22 107.1 72 62.5
Pp3c18_18500 Physcomitrium patens HOM05D006119 ORTHO05D007641 1.7e-21 105.9 80 58.8
RcHm_v2.0_Chr2g0085901 Rosa chinensis HOM05D006119 ORTHO05D007641 2.2e-21 105.5 74 60.8
HanXRQChr10g0314681 Helianthus annuus HOM05D006119 ORTHO05D007641 2.9e-21 105.1 74 64.9
SMO137G0238 Selaginella moellendorffii HOM05D006119 ORTHO05D007641 2.4e-20 102.1 80 57.5
MD02G1009100 Malus domestica HOM05D006119 ORTHO05D007641 5.4e-20 100.9 74 58.1
BcaNung07255 Brassica carinata HOM05D000882 ORTHO05D001142 1.3e-18 96.3 63 61.9
CAN.G551.35 Capsicum annuum HOM05D006119 ORTHO05D007641 5.1e-18 94.4 48 81.2
Nitab4.5_0003612g0050 Nicotiana tabacum HOM05D006119 ORTHO05D007641 1.5e-17 92.8 52 76.9
Pp3c21_10430 Physcomitrium patens HOM05D006119 ORTHO05D007641 5.6e-17 90.9 80 51.2
AagrBONN_evm.TU.Sc2ySwM_228.1886 Anthoceros agrestis HOM05D006119 ORTHO05D007641 3.8e-13 78.2 51 58.8
Sp6g19680 Schrenkiella parvula HOM05D006119 ORTHO05D007641 4.9e-13 77.8 49 65.3
SEGI_38164 Sequoiadendron giganteum HOM05D006119 ORTHO05D007641 1.1e-12 76.6 49 61.2
Rhsim04G0128900 Rhododendron simsii HOM05D002149 ORTHO05D002154 1.5e-09 66.2 42 73.8
Pp3c22_3250 Physcomitrium patens HOM05D006119 ORTHO05D007641 3.3e-09 65.1 71 42.3
PSO339G5888 Papaver somniferum HOM05D006119 ORTHO05D007641 1.5e-06 56.2 96 36.5


User provided reference genes

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