Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0006375g0010 Nicotiana tabacum HOM05D007047 ORTHO05D009177 1.2e-272 942.6 470 100.0
Nitab4.5_0000506g0030 Nicotiana tabacum HOM05D007047 ORTHO05D009177 1.3e-231 806.2 466 89.1
PGSC0003DMG400024159 Solanum tuberosum HOM05D007047 ORTHO05D009177 2.7e-176 622.5 486 70.0
Sopen06g021010 Solanum pennellii HOM05D007047 ORTHO05D009177 1.5e-166 590.1 486 67.7
Solyc06g060860.2 Solanum lycopersicum HOM05D007047 ORTHO05D009177 1.9e-166 589.7 486 67.3
CAN.G62.14 Capsicum annuum HOM05D007047 ORTHO05D009177 4.8e-157 558.5 418 72.0
Peaxi162Scf00190g01213 Petunia axillaris HOM05D007047 ORTHO05D009177 5.2e-111 405.6 476 51.7
Dinv28849 Davidia involucrata HOM05D007047 ORTHO05D006202 2.7e-43 180.6 453 35.8
Oeu045687.1 Olea europaea HOM05D007047 ORTHO05D009177 6.9e-39 166.0 500 30.8
Hma1.2p1_0821F.1_g224180 Hydrangea macrophylla HOM05D007047 ORTHO05D009177 5.1e-34 149.8 449 32.3
Oeu045675.1 Olea europaea HOM05D007047 ORTHO05D009177 1.4e-31 141.7 344 32.8
Prupe.4G179300 Prunus persica HOM05D007047 ORTHO05D009177 3.6e-27 127.1 487 29.6
CSS0008245 Camellia sinensis var. sinensis HOM05D007047 ORTHO05D009177 7.9e-27 125.9 462 31.0
Thecc.03G244500 Theobroma cacao HOM05D007047 ORTHO05D009177 1.0e-26 125.6 524 28.1
QL12p009685 Quercus lobata HOM05D007047 ORTHO05D009177 1.8e-26 124.8 546 27.7
SGA_v2.0_scaffold104G30204 Striga asiatica HOM05D007047 ORTHO05D009177 2.3e-26 124.4 492 28.5
CiPaw.12G048400 Carya illinoinensis HOM05D007047 ORTHO05D009177 8.8e-26 122.5 481 29.5
Potri.003G080700 Populus trichocarpa HOM05D007047 ORTHO05D009177 1.3e-24 118.6 539 27.8
FvH4_2g33151 Fragaria vesca HOM05D007047 ORTHO05D009177 1.7e-24 118.2 541 27.7
FAN24G2075 Fragaria x ananassa HOM05D007047 ORTHO05D009177 2.2e-24 117.9 535 27.7
Actinidia31505 Actinidia chinensis HOM05D007047 ORTHO05D006202 8.2e-24 115.9 449 30.7
Dinv39189 Davidia involucrata HOM05D000549 ORTHO05D006202 1.1e-23 115.5 234 38.0
SalBow6G1440 Salvia bowleyana HOM05D007047 ORTHO05D009177 1.1e-23 115.5 445 29.4
Ciclev10024423m.g Citrus clementina HOM05D007047 ORTHO05D009177 1.4e-23 115.2 502 27.5
QL12p009257 Quercus lobata HOM05D007047 ORTHO05D009177 1.4e-23 115.2 543 27.1
GSVIVG01004793001 Vitis vinifera HOM05D000549 ORTHO05D006202 3.1e-23 114.0 344 30.5
Atru.chr9.1243 Acer truncatum HOM05D007047 ORTHO05D009177 7.0e-23 112.8 490 29.4
Sabra03G0052300 Salix brachista HOM05D007047 ORTHO05D009177 1.5e-22 111.7 548 27.4
COL.COLO4_10022 Corchorus olitorius HOM05D007047 ORTHO05D009177 7.7e-22 109.4 521 26.3
DCAR_000643 Daucus carota HOM05D007047 ORTHO05D009177 1.7e-21 108.2 545 27.0
TAR375G0331 Trochodendron aralioides HOM05D007047 ORTHO05D009177 2.9e-21 107.5 336 31.0
Manes.02G042900 Manihot esculenta HOM05D007047 ORTHO05D009177 6.5e-21 106.3 535 28.6
PGR031G1177 Punica granatum HOM05D007047 ORTHO05D009177 1.1e-20 105.5 530 26.4
Carub.0007s2455 Capsella rubella HOM05D007047 ORTHO05D009177 1.5e-20 105.1 488 26.6
FAN08G2081 Fragaria x ananassa HOM05D007047 ORTHO05D009177 2.5e-20 104.4 438 29.2
FAN04G0327 Fragaria x ananassa HOM05D007047 ORTHO05D009177 5.5e-20 103.2 533 27.2
Duzib205G0846 Durio zibethinus HOM05D007047 ORTHO05D009177 4.7e-19 100.1 495 26.7
AUR62006813 Chenopodium quinoa HOM05D007047 ORTHO05D009177 6.1e-19 99.8 524 26.0
ClCG10G002400 Citrullus lanatus HOM05D007047 ORTHO05D009177 8.0e-19 99.4 442 28.1
Glyma.01G206100 Glycine max HOM05D007047 ORTHO05D009177 1.0e-18 99.0 387 27.4
TPR.G17974 Trifolium pratense HOM05D007047 ORTHO05D009177 1.4e-18 98.6 478 25.9
FAN20G0731 Fragaria x ananassa HOM05D007047 ORTHO05D009177 1.8e-18 98.2 321 29.9
Hund11335 Selenicereus undatus HOM05D007047 ORTHO05D009177 1.8e-18 98.2 491 25.3
Rhsim07G0117200 Rhododendron simsii HOM05D007047 ORTHO05D009177 8.8e-18 95.9 427 28.6
Rhsim07G0117500 Rhododendron simsii HOM05D007047 ORTHO05D009177 8.8e-18 95.9 351 29.1
FAN27G3081 Fragaria x ananassa HOM05D007047 ORTHO05D009177 1.1e-17 95.5 323 27.6
Lalb_Chr16g0379431 Lupinus albus HOM05D007047 ORTHO05D009177 1.5e-17 95.1 429 29.1
CsaV3_3G002430 Cucumis sativus L. HOM05D007047 ORTHO05D009177 2.6e-17 94.4 470 27.4
RcHm_v2.0_Chr7g0204751 Rosa chinensis HOM05D007047 ORTHO05D009177 4.4e-17 93.6 441 27.9
Ca_24599_v3 Cicer arietinum L. HOM05D007047 ORTHO05D009177 5.7e-17 93.2 439 28.7
Nn6g33825 Nelumbo nucifera HOM05D007047 ORTHO05D009177 1.3e-16 92.0 325 28.9
PSO063G2347 Papaver somniferum HOM05D007047 ORTHO05D009177 1.3e-16 92.0 490 27.1
THA.LOC104807915 Tarenaya hassleriana HOM05D007047 ORTHO05D009177 1.7e-16 91.7 382 27.2
Haze_07962 Corylus avellana HOM05D007047 ORTHO05D009177 2.8e-16 90.9 378 25.1
MELO3C013912.2 Cucumis melo HOM05D007047 ORTHO05D009177 2.8e-16 90.9 439 28.2
Psat2g177160 Pisum sativum HOM05D007047 ORTHO05D009177 3.7e-16 90.5 468 23.3
Medtr5g013140 Medicago truncatula HOM05D007047 ORTHO05D009177 4.8e-16 90.1 434 26.3
CANSAT21G2499 Cannabis sativa HOM05D007047 ORTHO05D009177 1.8e-15 88.2 493 27.4
Cc08_g11870 Coffea canephora HOM05D000549 ORTHO05D006202 3.1e-15 87.4 170 37.6
MD06G1050900 Malus domestica HOM05D007047 ORTHO05D009177 4.1e-15 87.0 547 24.1
TWI60G0889 Tripterygium wilfordii HOM05D007047 ORTHO05D009177 7.0e-15 86.3 486 26.7
Phvul.002G000400 Phaseolus vulgaris HOM05D007047 ORTHO05D009177 2.6e-14 84.3 486 26.3
Ciclev10019636m.g Citrus clementina HOM05D000549 ORTHO05D006202 3.5e-14 84.0 253 30.0
MSTRG.25515 Avicennia marina HOM05D007047 ORTHO05D009177 4.5e-14 83.6 469 24.5
Lj2g0019775 Lotus japonicus HOM05D007047 ORTHO05D009177 4.5e-14 83.6 353 28.3
Gorai.004G194800 Gossypium raimondii HOM05D007047 ORTHO05D009177 5.9e-14 83.2 479 25.1
AUR62000471 Chenopodium quinoa HOM05D007047 ORTHO05D009177 7.7e-14 82.8 532 24.4
BraA08t33261Z Brassica rapa HOM05D007047 ORTHO05D009177 1.3e-13 82.0 505 26.3
Cpa.g.sc559.1 Carica papaya HOM05D007047 ORTHO05D009177 1.3e-13 82.0 319 25.4
A08p12720 Brassica napus HOM05D007047 ORTHO05D006202 2.9e-13 80.9 487 27.3
AT4G16807 Arabidopsis thaliana HOM05D007047 ORTHO05D009177 3.8e-13 80.5 473 25.2
CSS0009500 Camellia sinensis var. sinensis HOM05D007047 ORTHO05D009177 5.0e-13 80.1 438 27.2
AL7G37840 Arabidopsis lyrata HOM05D007047 ORTHO05D009177 6.5e-13 79.7 472 25.0
Eucgr.D02116 Eucalyptus grandis HOM05D007047 ORTHO05D009177 6.5e-13 79.7 314 27.1
BolC8t48412H Brassica oleracea HOM05D007047 ORTHO05D009177 8.5e-13 79.3 495 25.7
VMungo1215G0554 Vigna mungo HOM05D002164 ORTHO05D002267 1.9e-12 78.2 475 24.8
Sp7g17290 Schrenkiella parvula HOM05D007047 ORTHO05D009177 3.2e-12 77.4 502 24.7
Gohir.A08G166600 Gossypium hirsutum HOM05D007047 ORTHO05D009177 4.2e-12 77.0 489 24.1
Ah.10g026860 Amaranthus hybridus HOM05D007047 ORTHO05D009177 5.5e-12 76.6 423 25.8
EL10Ac4g09553 Beta vulgaris HOM05D007047 ORTHO05D009177 5.5e-12 76.6 424 24.5
Sed0008627 Sechium edule HOM05D007047 ORTHO05D009177 5.5e-12 76.6 327 27.8
Migut.A01028 Erythranthe guttata HOM05D007047 ORTHO05D009177 2.1e-11 74.7 433 28.4
CAN.G62.13 Capsicum annuum HOM05D007047 ORTHO05D009177 6.1e-11 73.2 95 43.2
Aqoxy3G02722 Aquilegia oxysepala HOM05D007047 ORTHO05D009177 8.0e-11 72.8 474 23.6
BcaC07g38023 Brassica carinata HOM05D007047 ORTHO05D009177 8.0e-11 72.8 496 25.0
Lsat_1_v5_gn_4_126100 Lactuca sativa HOM05D007047 ORTHO05D009177 5.2e-10 70.1 341 26.7
BcaB04g18396 Brassica carinata HOM05D007047 ORTHO05D006202 8.8e-10 69.3 511 24.3
unitig_744.g24476 Utricularia gibba HOM05D007047 ORTHO05D009177 8.8e-10 69.3 179 30.7
HPP92_022107 Vanilla planifolia HOM05D007047 ORTHO05D009177 2.0e-09 68.2 141 36.9
CARHR223430 Cardamine hirsuta HOM05D007047 ORTHO05D009177 2.6e-09 67.8 494 22.9
Thhalv10027153m.g Eutrema salsugineum HOM05D007047 ORTHO05D009177 4.4e-09 67.0 480 25.2
ECA240G0572 Erigeron canadensis HOM05D007047 ORTHO05D009177 9.8e-09 65.9 358 23.2
arahy.Tifrunner.gnm1.ann1.J4EMKX Arachis hypogaea HOM05D007047 ORTHO05D009177 1.7e-08 65.1 426 26.8
arahy.Tifrunner.gnm1.ann1.XH35PM Arachis hypogaea HOM05D007047 ORTHO05D009177 1.7e-08 65.1 426 26.8
Nitab4.5_0002358g0010 Nicotiana tabacum HOM05D002030 ORTHO05D007413 3.7e-08 63.9 37 81.1
Cpa.g.sc1463.1 Carica papaya HOM05D007047 ORTHO05D009177 5.4e-07 60.1 46 60.9
Medtr5g013080 Medicago truncatula HOM05D007047 ORTHO05D009177 1.6e-06 58.5 48 58.3
Zm00001eb428340 Zea mays HOM05D007047 ORTHO05D009177 1.6e-06 58.5 419 23.6
HanXRQChr11g0329491 Helianthus annuus HOM05D007047 ORTHO05D009177 2.0e-06 58.2 369 24.7
Os11g0249300 Oryza sativa ssp. japonica HOM05D007047 ORTHO05D009177 4.5e-06 57.0 407 21.9


User provided reference genes

Program Settings