Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0006360g0020 Nicotiana tabacum HOM05D003745 ORTHO05D004215 6.9e-44 180.3 92 100.0
Nitab4.5_0000663g0130 Nicotiana tabacum HOM05D003745 ORTHO05D004215 2.3e-39 165.2 92 93.5
Peaxi162Scf00433g00025 Petunia axillaris HOM05D003745 ORTHO05D004215 4.2e-33 144.4 93 82.8
PGSC0003DMG400002682 Solanum tuberosum HOM05D003745 ORTHO05D004215 5.3e-28 127.5 95 77.9
PGSC0003DMG400028173 Solanum tuberosum HOM05D003745 ORTHO05D004215 2.0e-22 109.0 81 67.9
Solyc10g083580.2 Solanum lycopersicum HOM05D003745 ORTHO05D004215 2.4e-20 102.1 81 63.0
Sopen09g003840 Solanum pennellii HOM05D003745 ORTHO05D004215 2.4e-20 102.1 81 72.8
Sopen10g033060 Solanum pennellii HOM05D003745 ORTHO05D004215 1.2e-19 99.8 81 61.7
Peaxi162Scf00110g02023 Petunia axillaris HOM05D003745 ORTHO05D004215 1.6e-19 99.4 88 60.2
Atru.chr8.1631 Acer truncatum HOM05D003745 ORTHO05D004215 5.2e-15 84.3 92 55.4
Nitab4.5_0000132g0150 Nicotiana tabacum HOM05D003745 ORTHO05D004215 1.3e-13 79.7 61 63.9
Rhsim03G0081200 Rhododendron simsii HOM05D003745 ORTHO05D004215 1.7e-13 79.3 94 54.3
vmacro07360 Vaccinium macrocarpon HOM05D003745 ORTHO05D004215 2.2e-13 79.0 96 54.2
Duzib128G0603 Durio zibethinus HOM05D003745 ORTHO05D004215 6.3e-13 77.4 90 50.0
QL07p040518 Quercus lobata HOM05D003745 ORTHO05D004215 2.4e-12 75.5 89 46.1
GSVIVG01033785001 Vitis vinifera HOM05D003745 ORTHO05D004215 2.4e-12 75.5 89 50.6
Actinidia11335 Actinidia chinensis HOM05D003745 ORTHO05D004215 4.1e-12 74.7 88 52.3
Cc06_g05290 Coffea canephora HOM05D003745 ORTHO05D004215 5.4e-12 74.3 80 55.0
CiPaw.09G008800 Carya illinoinensis HOM05D003745 ORTHO05D004215 7.0e-12 73.9 88 50.0
Dinv21253 Davidia involucrata HOM05D003745 ORTHO05D004215 9.2e-12 73.6 95 49.5
Thecc.05G081300 Theobroma cacao HOM05D003745 ORTHO05D004215 1.2e-11 73.2 91 50.5
Dinv19830 Davidia involucrata HOM05D003745 ORTHO05D004215 2.7e-11 72.0 96 50.0
Duzib093G0672 Durio zibethinus HOM05D003745 ORTHO05D004215 2.7e-11 72.0 79 51.9
Manes.09G058940 Manihot esculenta HOM05D003745 ORTHO05D004215 1.0e-10 70.1 97 47.4
TWI74G0799 Tripterygium wilfordii HOM05D003745 ORTHO05D004215 1.3e-10 69.7 87 48.3
Gohir.D01G198200 Gossypium hirsutum HOM05D003745 ORTHO05D004215 1.7e-10 69.3 86 48.8
Duzib106G0076 Durio zibethinus HOM05D003745 ORTHO05D004215 2.3e-10 68.9 89 49.4
TWI77G0164 Tripterygium wilfordii HOM05D003745 ORTHO05D004215 2.3e-10 68.9 90 46.7
Oeu040536.1 Olea europaea HOM05D003745 ORTHO05D004215 2.9e-10 68.6 79 50.6
Psat7g007360 Pisum sativum HOM05D003745 ORTHO05D004215 2.9e-10 68.6 88 48.9
Duzib106G0171 Durio zibethinus HOM05D003745 ORTHO05D004215 3.8e-10 68.2 92 46.7
Manes.08G021100 Manihot esculenta HOM05D003745 ORTHO05D004215 3.8e-10 68.2 50 66.0
FAN05G2107 Fragaria x ananassa HOM05D003745 ORTHO05D004215 5.0e-10 67.8 92 46.7
FAN05G2814 Fragaria x ananassa HOM05D003745 ORTHO05D004215 5.0e-10 67.8 92 46.7
Gorai.002G242400 Gossypium raimondii HOM05D003745 ORTHO05D004215 5.0e-10 67.8 86 47.7
TPR.G5649 Trifolium pratense HOM05D003745 ORTHO05D004215 6.6e-10 67.4 85 43.5
Gohir.A04G066114 Gossypium hirsutum HOM05D003745 ORTHO05D004215 8.6e-10 67.0 68 52.9
EL10Ac9g21084 Beta vulgaris HOM05D003745 ORTHO05D004215 1.1e-09 66.6 84 47.6
FvH4_6g17920 Fragaria vesca HOM05D003745 ORTHO05D004215 1.5e-09 66.2 92 46.7
FAN14G5394 Fragaria x ananassa HOM05D003745 ORTHO05D004215 1.5e-09 66.2 92 46.7
Gohir.A01G209100 Gossypium hirsutum HOM05D003745 ORTHO05D004215 1.5e-09 66.2 86 46.5
SalBow3G0913 Salvia bowleyana HOM05D003745 ORTHO05D004215 1.9e-09 65.9 80 46.2
DCAR_006146 Daucus carota HOM05D003745 ORTHO05D004215 4.3e-09 64.7 87 41.4
Nn2g14004 Nelumbo nucifera HOM05D003745 ORTHO05D004215 4.3e-09 64.7 83 49.4
Peaxi162Scf00789g00618 Petunia axillaris HOM05D003745 ORTHO05D004215 9.5e-09 63.5 96 41.7
Phvul.007G223101 Phaseolus vulgaris HOM05D003745 ORTHO05D004215 9.5e-09 63.5 87 47.1
Cpa.g.sc5.75 Carica papaya HOM05D003745 ORTHO05D004215 1.2e-08 63.2 88 46.6
Lj5g0022060 Lotus japonicus HOM05D003745 ORTHO05D004215 1.6e-08 62.8 84 44.0
PSO339G1716 Papaver somniferum HOM05D003745 ORTHO05D004215 2.1e-08 62.4 99 39.4
Actinidia24179 Actinidia chinensis HOM05D003745 ORTHO05D004215 2.8e-08 62.0 87 42.5
AL6G13230 Arabidopsis lyrata HOM05D003745 ORTHO05D004215 2.8e-08 62.0 96 38.5
Ciclev10003706m.g Citrus clementina HOM05D003745 ORTHO05D004215 2.8e-08 62.0 82 42.7
Cfa010081 Carpinus fangiana HOM05D003745 ORTHO05D004215 3.6e-08 61.6 79 48.1
FAN09G1254 Fragaria x ananassa HOM05D003745 ORTHO05D004215 3.6e-08 61.6 92 45.7
RcHm_v2.0_Chr3g0472171 Rosa chinensis HOM05D003745 ORTHO05D004215 3.6e-08 61.6 92 42.4
GSVIVG01031398001 Vitis vinifera HOM05D003745 ORTHO05D004215 3.6e-08 61.6 90 41.1
Glyma.10G066400 Glycine max HOM05D003745 ORTHO05D004215 4.7e-08 61.2 84 45.2
PSO063G0377 Papaver somniferum HOM05D003745 ORTHO05D004215 4.7e-08 61.2 99 38.4
Ah.08g210930 Amaranthus hybridus HOM05D040036 ORTHO05D004215 6.1e-08 60.8 97 40.2
Medtr1g061120 Medicago truncatula HOM05D003745 ORTHO05D004215 6.1e-08 60.8 87 43.7
PGR004G1125 Punica granatum HOM05D003745 ORTHO05D004215 6.1e-08 60.8 96 41.7
A10p32390 Brassica napus HOM05D003745 ORTHO05D004215 8.0e-08 60.5 100 38.0
BraA10t45279Z Brassica rapa HOM05D003745 ORTHO05D004215 8.0e-08 60.5 100 38.0
CiPaw.10G005500 Carya illinoinensis HOM05D003745 ORTHO05D004215 8.0e-08 60.5 85 42.4
RcHm_v2.0_Chr5g0055241 Rosa chinensis HOM05D003745 ORTHO05D004215 8.0e-08 60.5 81 44.4
PGSC0003DMG400026535 Solanum tuberosum HOM05D003745 ORTHO05D004215 8.0e-08 60.5 100 43.0
Ciclev10013197m.g Citrus clementina HOM05D003745 ORTHO05D004215 1.0e-07 60.1 88 44.3
Eucgr.A01541 Eucalyptus grandis HOM05D003745 ORTHO05D004215 1.0e-07 60.1 90 46.7
PSO384G0932 Papaver somniferum HOM05D003745 ORTHO05D004215 1.0e-07 60.1 89 48.3
SalBow6G4256 Salvia bowleyana HOM05D003745 ORTHO05D004215 1.0e-07 60.1 82 43.9
Solyc11g066880.2 Solanum lycopersicum HOM05D003745 ORTHO05D004215 1.0e-07 60.1 99 45.5
TAR636G1780 Trochodendron aralioides HOM05D003745 ORTHO05D004215 1.0e-07 60.1 57 50.9
C09p73210 Brassica napus HOM05D003745 ORTHO05D004215 1.4e-07 59.7 100 38.0
BolC9t60056H Brassica oleracea HOM05D003745 ORTHO05D004215 1.4e-07 59.7 100 38.0
Cc01_g09790 Coffea canephora HOM05D003745 ORTHO05D004215 1.4e-07 59.7 99 40.4
Potri.009G148900 Populus trichocarpa HOM05D003745 ORTHO05D004215 1.4e-07 59.7 82 46.3
CSS0050359 Camellia sinensis var. sinensis HOM05D003745 ORTHO05D004215 1.8e-07 59.3 87 41.4
Gohir.D07G111300 Gossypium hirsutum HOM05D003745 ORTHO05D004215 1.8e-07 59.3 84 44.0
MD12G1018200 Malus domestica HOM05D003745 ORTHO05D004215 1.8e-07 59.3 87 44.8
Medtr2g084855 Medicago truncatula HOM05D003745 ORTHO05D004215 1.8e-07 59.3 76 44.7
Atru.chr3.3378 Acer truncatum HOM05D003745 ORTHO05D004215 2.3e-07 58.9 54 48.1
CiPaw.13G141100 Carya illinoinensis HOM05D003745 ORTHO05D004215 2.3e-07 58.9 86 39.5
Manes.11G157100 Manihot esculenta HOM05D003745 ORTHO05D004215 2.3e-07 58.9 84 48.8
Gohir.A07G107300 Gossypium hirsutum HOM05D003745 ORTHO05D004215 3.0e-07 58.5 87 44.8
PSO339G5919 Papaver somniferum HOM05D003745 ORTHO05D004215 4.0e-07 58.2 89 47.2
Actinidia07207 Actinidia chinensis HOM05D003745 ORTHO05D004215 5.2e-07 57.8 86 39.5
Actinidia37099 Actinidia chinensis HOM05D003745 ORTHO05D004215 5.2e-07 57.8 88 42.0
Glyma.13G151500 Glycine max HOM05D003745 ORTHO05D004215 5.2e-07 57.8 94 42.6
Gorai.001G119600 Gossypium raimondii HOM05D003745 ORTHO05D004215 5.2e-07 57.8 87 43.7
TAR369G1123 Trochodendron aralioides HOM05D003745 ORTHO05D004215 5.2e-07 57.8 84 42.9
CANSAT54G1542 Cannabis sativa HOM05D003745 ORTHO05D004215 6.8e-07 57.4 70 45.7
Carub.0006s0262 Capsella rubella HOM05D003745 ORTHO05D004215 6.8e-07 57.4 92 41.3
Nitab4.5_0010833g0010 Nicotiana tabacum HOM05D003745 ORTHO05D004215 6.8e-07 57.4 92 38.0
arahy.Tifrunner.gnm1.ann1.AP4865 Arachis hypogaea HOM05D003745 ORTHO05D004215 8.9e-07 57.0 90 43.3
arahy.Tifrunner.gnm1.ann1.NCX3KP Arachis hypogaea HOM05D003745 ORTHO05D004215 8.9e-07 57.0 90 43.3
Duzib168G0884 Durio zibethinus HOM05D003745 ORTHO05D004215 8.9e-07 57.0 79 40.5
Gohir.A01G209200 Gossypium hirsutum HOM05D003745 ORTHO05D004215 8.9e-07 57.0 93 39.8
Lalb_Chr02g0155181 Lupinus albus HOM05D003745 ORTHO05D004215 8.9e-07 57.0 91 36.3
FAN02G0871 Fragaria x ananassa HOM05D003745 ORTHO05D004215 1.2e-06 56.6 38 76.3
FAN21G0140 Fragaria x ananassa HOM05D003745 ORTHO05D004215 1.2e-06 56.6 82 41.5
Rhsim13G0105100 Rhododendron simsii HOM05D003745 ORTHO05D004215 1.2e-06 56.6 84 44.0
Sabra04G0127200 Salix brachista HOM05D003745 ORTHO05D004215 1.2e-06 56.6 88 46.6
Thecc.09G291500 Theobroma cacao HOM05D003745 ORTHO05D004215 1.2e-06 56.6 79 44.3
AT3G44735 Arabidopsis thaliana HOM05D003745 ORTHO05D004215 1.5e-06 56.2 78 42.3
CARHR151430 Cardamine hirsuta HOM05D003745 ORTHO05D004215 1.5e-06 56.2 78 41.0
Ciclev10029683m.g Citrus clementina HOM05D003745 ORTHO05D004215 1.5e-06 56.2 81 42.0
Dinv29425 Davidia involucrata HOM05D003745 ORTHO05D004215 1.5e-06 56.2 84 46.4
TWI75G0377 Tripterygium wilfordii HOM05D003745 ORTHO05D004215 1.5e-06 56.2 84 41.7
CAN.G644.31 Capsicum annuum HOM05D003745 ORTHO05D004215 2.0e-06 55.8 100 40.0
Gorai.002G242500 Gossypium raimondii HOM05D003745 ORTHO05D004215 2.0e-06 55.8 86 40.7
MD14G1016200 Malus domestica HOM05D003745 ORTHO05D004215 2.0e-06 55.8 87 41.4
vmacro03277 Vaccinium macrocarpon HOM05D003745 ORTHO05D004215 2.0e-06 55.8 94 46.8
vmacro23109 Vaccinium macrocarpon HOM05D003745 ORTHO05D004215 2.0e-06 55.8 94 46.8
Prupe.7G116900 Prunus persica HOM05D003745 ORTHO05D004215 2.6e-06 55.5 44 61.4
CANSAT80G1673 Cannabis sativa HOM05D003745 ORTHO05D004215 4.4e-06 54.7 95 38.9
CiPaw.14G103500 Carya illinoinensis HOM05D003745 ORTHO05D004215 4.4e-06 54.7 85 40.0
Gohir.D01G198300 Gossypium hirsutum HOM05D003745 ORTHO05D004215 4.4e-06 54.7 86 43.0
Actinidia35448 Actinidia chinensis HOM05D003745 ORTHO05D004215 5.7e-06 54.3 91 38.5
Carub.0005s1042 Capsella rubella HOM05D003745 ORTHO05D004215 5.7e-06 54.3 79 43.0
Carub.0015s0003 Capsella rubella HOM05D003745 ORTHO05D004215 5.7e-06 54.3 79 43.0
CAN.G919.7 Capsicum annuum HOM05D003745 ORTHO05D004215 5.7e-06 54.3 98 40.8
Hund00782 Selenicereus undatus HOM05D003745 ORTHO05D004215 5.7e-06 54.3 88 42.0
Aqoxy2G01397 Aquilegia oxysepala HOM05D003745 ORTHO05D004215 7.5e-06 53.9 86 44.2
Thhalv10015130m.g Eutrema salsugineum HOM05D003745 ORTHO05D004215 7.5e-06 53.9 93 39.8
FAN11G3796 Fragaria x ananassa HOM05D003745 ORTHO05D004215 7.5e-06 53.9 88 40.9
FAN16G1639 Fragaria x ananassa HOM05D003745 ORTHO05D004215 7.5e-06 53.9 88 40.9
Gohir.A09G093200 Gossypium hirsutum HOM05D003745 ORTHO05D004215 7.5e-06 53.9 81 40.7
Lj3g0011252 Lotus japonicus HOM05D003745 ORTHO05D004215 7.5e-06 53.9 81 44.4
Nn6g35042 Nelumbo nucifera HOM05D003745 ORTHO05D004215 7.5e-06 53.9 58 44.8
PGSC0003DMG400007123 Solanum tuberosum HOM05D003745 ORTHO05D004215 7.5e-06 53.9 93 39.8
TAR633G1338 Trochodendron aralioides HOM05D003745 ORTHO05D004215 7.5e-06 53.9 43 60.5
Peaxi162Scf00157g00066 Petunia axillaris HOM05D003745 ORTHO05D004215 9.8e-06 53.5 89 38.2
Potri.004G188200 Populus trichocarpa HOM05D003745 ORTHO05D004215 9.8e-06 53.5 83 45.8
Sopen11g026590 Solanum pennellii HOM05D003745 ORTHO05D004215 9.8e-06 53.5 84 45.2
TWI79G1201 Tripterygium wilfordii HOM05D003745 ORTHO05D004215 9.8e-06 53.5 87 40.2


User provided reference genes

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