Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0006338g0010 Nicotiana tabacum HOM05D008031 ORTHO05D010063 1.8e-98 362.5 171 100.0
Nitab4.5_0006966g0010 Nicotiana tabacum HOM05D008031 ORTHO05D010063 1.2e-73 280.0 171 80.7
Solyc03g123670.3 Solanum lycopersicum HOM05D008031 ORTHO05D010063 3.7e-67 258.5 170 72.9
PGSC0003DMG400009151 Solanum tuberosum HOM05D008031 ORTHO05D010063 8.3e-67 257.3 170 72.9
Sopen03g041440 Solanum pennellii HOM05D008031 ORTHO05D010063 3.2e-66 255.4 170 71.8
Peaxi162Scf00038g02327 Petunia axillaris HOM05D008031 ORTHO05D010063 9.5e-63 243.8 172 71.5
Atru.chr1.4165 Acer truncatum HOM05D008031 ORTHO05D010063 1.9e-34 149.8 172 46.5
Manes.04G151400 Manihot esculenta HOM05D008031 ORTHO05D010063 2.8e-30 136.0 168 45.8
Cc04_g00650 Coffea canephora HOM05D008031 ORTHO05D010063 1.4e-29 133.7 171 45.6
Oeu019510.1 Olea europaea HOM05D008031 ORTHO05D010063 6.9e-29 131.3 169 42.6
Potri.001G162100 Populus trichocarpa HOM05D008031 ORTHO05D010063 9.0e-29 131.0 169 44.4
Actinidia21841 Actinidia chinensis HOM05D008031 ORTHO05D010063 3.4e-28 129.0 172 45.9
TAR626G1534 Trochodendron aralioides HOM05D008031 ORTHO05D010063 8.4e-27 124.4 169 42.0
Thecc.06G130800 Theobroma cacao HOM05D008031 ORTHO05D010063 1.4e-26 123.6 169 39.1
Atru.chr1.4161 Acer truncatum HOM05D008031 ORTHO05D010063 1.9e-26 123.2 174 46.0
Ciclev10027015m.g Citrus clementina HOM05D008031 ORTHO05D010063 2.4e-26 122.9 205 39.5
PGR102G3014 Punica granatum HOM05D008031 ORTHO05D010063 1.2e-25 120.6 173 42.2
Potri.003G073200 Populus trichocarpa HOM05D008031 ORTHO05D010063 2.7e-25 119.4 169 43.2
Oeu053417.1 Olea europaea HOM05D008031 ORTHO05D010063 4.6e-25 118.6 169 42.0
CSS0025062 Camellia sinensis var. sinensis HOM05D001728 ORTHO05D004321 6.0e-25 118.2 168 43.5
Hma1.2p1_0090F.1_g045750 Hydrangea macrophylla HOM05D008031 ORTHO05D010063 6.0e-25 118.2 170 43.5
Hma1.2p1_2628F.1_g325675 Hydrangea macrophylla HOM05D008031 ORTHO05D010063 6.0e-25 118.2 170 43.5
Actinidia24421 Actinidia chinensis HOM05D001728 ORTHO05D004321 7.9e-25 117.9 172 45.3
COL.COLO4_30875 Corchorus olitorius HOM05D008031 ORTHO05D010063 3.9e-24 115.5 169 37.9
Migut.I01137 Erythranthe guttata HOM05D008031 ORTHO05D010063 5.1e-24 115.2 172 44.8
GSVIVG01016662001 Vitis vinifera HOM05D008031 ORTHO05D010063 8.7e-24 114.4 169 40.8
TWI14G1127 Tripterygium wilfordii HOM05D008031 ORTHO05D010063 1.1e-23 114.0 173 41.0
CiPaw.02G130600 Carya illinoinensis HOM05D008031 ORTHO05D010063 3.3e-23 112.5 171 40.4
CAN.G635.24 Capsicum annuum HOM05D008031 ORTHO05D010063 5.6e-23 111.7 168 38.7
QL05p000882 Quercus lobata HOM05D008031 ORTHO05D010063 7.4e-23 111.3 169 43.2
QL05p001111 Quercus lobata HOM05D008031 ORTHO05D010063 7.4e-23 111.3 169 43.2
Haze_16140 Corylus avellana HOM05D001728 ORTHO05D004321 1.6e-22 110.2 170 41.2
CiPaw.01G211000 Carya illinoinensis HOM05D008031 ORTHO05D010063 2.1e-22 109.8 171 39.8
Rhsim08G0245200 Rhododendron simsii HOM05D008031 ORTHO05D010063 2.1e-22 109.8 173 43.4
SGA_v2.0_scaffold71G23934 Striga asiatica HOM05D008031 ORTHO05D010063 3.7e-22 109.0 170 40.0
Prupe.3G030600 Prunus persica HOM05D008031 ORTHO05D010063 4.8e-22 108.6 171 40.4
Gorai.011G054900 Gossypium raimondii HOM05D001728 ORTHO05D004321 1.8e-21 106.7 172 36.6
Gohir.D10G051032 Gossypium hirsutum HOM05D001728 ORTHO05D004321 2.4e-21 106.3 172 36.6
CANSAT56G3277 Cannabis sativa HOM05D008031 ORTHO05D010063 3.1e-21 105.9 168 36.9
RcHm_v2.0_Chr2g0148091 Rosa chinensis HOM05D008031 ORTHO05D010063 5.3e-21 105.1 167 37.1
Eucgr.J02592 Eucalyptus grandis HOM05D008031 ORTHO05D010063 6.9e-21 104.8 169 39.1
Gohir.A10G048037 Gossypium hirsutum HOM05D001728 ORTHO05D004321 1.2e-20 104.0 172 37.2
Lj3g0013752 Lotus japonicus HOM05D008031 ORTHO05D010063 1.2e-20 104.0 171 39.8
FvH4_6g35970 Fragaria vesca HOM05D008031 ORTHO05D010063 1.5e-20 103.6 167 36.5
FAN09G4453 Fragaria x ananassa HOM05D008031 ORTHO05D010063 1.5e-20 103.6 167 36.5
FAN14G4753 Fragaria x ananassa HOM05D008031 ORTHO05D010063 1.5e-20 103.6 167 36.5
FAN02G3240 Fragaria x ananassa HOM05D008031 ORTHO05D010063 2.0e-20 103.2 167 36.5
MBI19_g32875_MAGBIO Magnolia biondii HOM05D008031 ORTHO05D010063 7.6e-20 101.3 177 39.0
FAN05G2192 Fragaria x ananassa HOM05D008031 ORTHO05D010063 1.0e-19 100.9 169 36.7
Glyma.07G046300 Glycine max HOM05D008031 ORTHO05D010063 1.0e-19 100.9 175 40.6
Cfa003457 Carpinus fangiana HOM05D008031 ORTHO05D010063 1.4e-18 97.1 173 39.3
Cpa.g.sc25.199 Carica papaya HOM05D008031 ORTHO05D010063 4.2e-18 95.5 171 38.6
Phvul.010G122700 Phaseolus vulgaris HOM05D008031 ORTHO05D010063 2.1e-17 93.2 174 36.8
Ah.08g217400 Amaranthus hybridus HOM05D008031 ORTHO05D010063 1.8e-16 90.1 184 35.3
MD09G1172200 Malus domestica HOM05D008031 ORTHO05D010063 2.3e-16 89.7 151 37.1
Duzib235G0155 Durio zibethinus HOM05D008031 ORTHO05D010063 3.0e-16 89.4 141 36.9
MD17G1154700 Malus domestica HOM05D008031 ORTHO05D010063 3.0e-16 89.4 151 41.1
Lalb_Chr10g0101091 Lupinus albus HOM05D008031 ORTHO05D010063 5.1e-16 88.6 168 36.9
Dinv20378 Davidia involucrata HOM05D001728 ORTHO05D004321 8.7e-16 87.8 113 46.0
VMungo0331G1222 Vigna mungo HOM05D008031 ORTHO05D010063 1.5e-15 87.0 173 35.3
DCAR_022641 Daucus carota HOM05D008031 ORTHO05D010063 5.7e-15 85.1 175 37.7
TPR.G29474 Trifolium pratense HOM05D008031 ORTHO05D010063 8.2e-14 81.3 176 36.9
MELO3C022708.2 Cucumis melo HOM05D008031 ORTHO05D010063 3.1e-13 79.3 152 36.2
CsaV3_3G031060 Cucumis sativus L. HOM05D008031 ORTHO05D010063 6.9e-13 78.2 153 37.3
Lsat_1_v5_gn_4_90600 Lactuca sativa HOM05D008031 ORTHO05D010063 6.9e-13 78.2 156 33.3
MSTRG.9544 Avicennia marina HOM05D008031 ORTHO05D010063 9.0e-13 77.8 151 35.1
Manes.15G010800 Manihot esculenta HOM05D005099 ORTHO05D006087 3.4e-12 75.9 179 31.3
MBI18_g04556_MAGBIO Magnolia biondii HOM05D005099 ORTHO05D006087 2.2e-11 73.2 174 30.5
Oeu015468.1 Olea europaea HOM05D008031 ORTHO05D010063 2.2e-11 73.2 160 35.0
Rhsim02G0007200 Rhododendron simsii HOM05D005099 ORTHO05D006087 2.9e-11 72.8 176 29.5
Nn3g21536 Nelumbo nucifera HOM05D005099 ORTHO05D006087 1.1e-10 70.9 182 34.1
Actinidia14282 Actinidia chinensis HOM05D005099 ORTHO05D006087 1.4e-10 70.5 178 30.3
ATR0693G064 Amborella trichopoda HOM05D005099 ORTHO05D006087 1.9e-10 70.1 168 32.7
TAR362G0212 Trochodendron aralioides HOM05D005099 ORTHO05D006087 3.2e-10 69.3 183 31.1
vmacro15214 Vaccinium macrocarpon HOM05D005099 ORTHO05D006087 2.1e-09 66.6 163 27.6
Potri.008G219500 Populus trichocarpa HOM05D005099 ORTHO05D006087 2.7e-09 66.2 189 30.2
FvH4_4g18620 Fragaria vesca HOM05D005099 ORTHO05D006087 3.5e-09 65.9 193 30.6
FAN12G1484 Fragaria x ananassa HOM05D005099 ORTHO05D006087 3.5e-09 65.9 193 30.6
FAN12G1671 Fragaria x ananassa HOM05D005099 ORTHO05D006087 3.5e-09 65.9 193 30.6
Manes.03G198300 Manihot esculenta HOM05D005099 ORTHO05D006087 3.5e-09 65.9 179 28.5
Sabra08G0151700 Salix brachista HOM05D005099 ORTHO05D006087 3.5e-09 65.9 188 31.4
Duzib212G0134 Durio zibethinus HOM05D005099 ORTHO05D006087 4.6e-09 65.5 182 29.1
Cfa015424 Carpinus fangiana HOM05D005099 ORTHO05D006087 6.1e-09 65.1 189 29.1
Ah.13g074810 Amaranthus hybridus HOM05D005099 ORTHO05D006087 7.9e-09 64.7 169 28.4
Ciclev10006010m.g Citrus clementina HOM05D005099 ORTHO05D006087 1.0e-08 64.3 183 28.4
SalBow6G0345 Salvia bowleyana HOM05D008031 ORTHO05D010063 1.0e-08 64.3 166 33.1
TAR365G0602 Trochodendron aralioides HOM05D005099 ORTHO05D006087 1.8e-08 63.5 192 29.2
Thecc.04G288600 Theobroma cacao HOM05D005099 ORTHO05D006087 2.3e-08 63.2 188 27.7
Dinv44353 Davidia involucrata HOM05D005099 ORTHO05D006087 3.0e-08 62.8 187 28.9
HanXRQChr17g0536041 Helianthus annuus HOM05D005099 ORTHO05D006087 3.0e-08 62.8 183 29.5
Potri.010G010600 Populus trichocarpa HOM05D005099 ORTHO05D006087 3.9e-08 62.4 188 27.7
Sabra10G0006200 Salix brachista HOM05D005099 ORTHO05D006087 5.1e-08 62.0 192 30.2
Nitab4.5_0000695g0110 Nicotiana tabacum HOM05D005099 ORTHO05D006087 6.7e-08 61.6 193 30.1
CSS0049831 Camellia sinensis var. sinensis HOM05D005099 ORTHO05D006087 8.7e-08 61.2 178 30.9
PGSC0003DMG400011309 Solanum tuberosum HOM05D005099 ORTHO05D006087 8.7e-08 61.2 186 30.1
Haze_01169 Corylus avellana HOM05D005099 ORTHO05D006087 1.1e-07 60.8 182 26.9
CSS0011820 Camellia sinensis var. sinensis HOM05D005099 ORTHO05D006087 1.5e-07 60.5 179 30.2
CAN.G14.36 Capsicum annuum HOM05D005099 ORTHO05D006087 1.5e-07 60.5 194 28.4
QL06p010333 Quercus lobata HOM05D005099 ORTHO05D006087 1.5e-07 60.5 198 28.3
Atru.chr4.2896 Acer truncatum HOM05D005099 ORTHO05D006087 1.9e-07 60.1 196 28.6
CsaV3_6G023860 Cucumis sativus L. HOM05D005099 ORTHO05D006087 1.9e-07 60.1 184 27.7
Sopen01g028090 Solanum pennellii HOM05D005099 ORTHO05D006087 1.9e-07 60.1 188 29.3
Oeu033813.1 Olea europaea HOM05D005099 ORTHO05D006087 2.5e-07 59.7 182 30.2
FAN07G0877 Fragaria x ananassa HOM05D005099 ORTHO05D006087 3.3e-07 59.3 186 28.5
AUR62018071 Chenopodium quinoa HOM05D005099 ORTHO05D006087 4.3e-07 58.9 186 29.0
CiPaw.01G145600 Carya illinoinensis HOM05D005099 ORTHO05D006087 5.7e-07 58.5 189 28.6
MD16G1164800 Malus domestica HOM05D005099 ORTHO05D006087 5.7e-07 58.5 183 26.8
THA.LOC104827334 Tarenaya hassleriana HOM05D005099 ORTHO05D006087 5.7e-07 58.5 193 29.0
MELO3C021313.2 Cucumis melo HOM05D005099 ORTHO05D006087 7.4e-07 58.2 187 28.3
Medtr2g435810 Medicago truncatula HOM05D005099 ORTHO05D006087 7.4e-07 58.2 184 28.3
Medtr2g436150 Medicago truncatula HOM05D005099 ORTHO05D006087 7.4e-07 58.2 184 28.3
Hma1.2p1_0804F.1_g221070 Hydrangea macrophylla HOM05D005099 ORTHO05D006087 9.7e-07 57.8 190 29.5
SGA_v2.0_scaffold67G22601 Striga asiatica HOM05D005099 ORTHO05D006087 1.3e-06 57.4 174 27.0
MSTRG.3894 Avicennia marina HOM05D005099 ORTHO05D006087 1.6e-06 57.0 178 29.8
AUR62015274 Chenopodium quinoa HOM05D005099 ORTHO05D006087 1.6e-06 57.0 182 27.5
Dinv29728 Davidia involucrata HOM05D005099 ORTHO05D006087 1.6e-06 57.0 178 28.7
Nitab4.5_0003767g0020 Nicotiana tabacum HOM05D005099 ORTHO05D006087 1.6e-06 57.0 192 28.6
Prupe.1G124100 Prunus persica HOM05D005099 ORTHO05D006087 1.6e-06 57.0 180 28.9
Rhsim08G0245400 Rhododendron simsii HOM05D002316 ORTHO05D002280 1.6e-06 57.0 78 44.9
Phvul.009G250300 Phaseolus vulgaris HOM05D005099 ORTHO05D006087 2.2e-06 56.6 186 24.2
CiPaw.02G080200 Carya illinoinensis HOM05D005099 ORTHO05D006087 2.8e-06 56.2 188 27.1
ClCG06G004980 Citrullus lanatus HOM05D005099 ORTHO05D006087 2.8e-06 56.2 180 26.7
SalBow2G2334 Salvia bowleyana HOM05D005099 ORTHO05D006087 2.8e-06 56.2 176 26.7
TWI73G1062 Tripterygium wilfordii HOM05D005099 ORTHO05D006087 2.8e-06 56.2 197 26.4
EL10Ac3g06640 Beta vulgaris HOM05D005099 ORTHO05D006087 3.7e-06 55.8 186 28.0
COL.COLO4_13826 Corchorus olitorius HOM05D005099 ORTHO05D006087 3.7e-06 55.8 190 28.9
Eucgr.H03959 Eucalyptus grandis HOM05D005099 ORTHO05D006087 3.7e-06 55.8 206 26.2
Sed0019517 Sechium edule HOM05D005099 ORTHO05D006087 6.3e-06 55.1 186 28.5
Solyc01g066440.3 Solanum lycopersicum HOM05D005099 ORTHO05D006087 8.2e-06 54.7 188 28.7


User provided reference genes

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