Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0006311g0030 Nicotiana tabacum HOM05D005761 ORTHO05D007286 3.7e-77 291.6 159 100.0
Nitab4.5_0001315g0120 Nicotiana tabacum HOM05D005761 ORTHO05D007286 2.6e-75 285.4 158 98.1
CAN.G438.30 Capsicum annuum HOM05D005761 ORTHO05D007286 1.9e-73 279.3 159 88.1
Nitab4.5_0007217g0020 Nicotiana tabacum HOM05D005761 ORTHO05D007286 8.0e-72 273.9 141 96.5
Peaxi162Scf00015g00136 Petunia axillaris HOM05D005761 ORTHO05D007286 8.8e-71 270.4 159 92.5
PGSC0003DMG401002548 Solanum tuberosum HOM05D005761 ORTHO05D007286 9.8e-70 266.9 159 86.2
Solyc03g120610.3 Solanum lycopersicum HOM05D005761 ORTHO05D007286 2.2e-69 265.8 159 84.9
Sopen00g008190 Solanum pennellii HOM05D005761 ORTHO05D007286 2.2e-69 265.8 159 84.9
Peaxi162Scf00029g02413 Petunia axillaris HOM05D005761 ORTHO05D007286 1.3e-66 256.5 176 83.5
Gohir.D05G131700 Gossypium hirsutum HOM05D005761 ORTHO05D007286 8.5e-66 253.8 141 88.7
Gorai.009G135400 Gossypium raimondii HOM05D005761 ORTHO05D007286 8.5e-66 253.8 141 88.7
Cc04_g07670 Coffea canephora HOM05D005761 ORTHO05D007286 1.9e-65 252.7 141 87.2
Oeu000460.1 Olea europaea HOM05D005761 ORTHO05D007286 1.9e-65 252.7 157 80.9
Gohir.A05G132200 Gossypium hirsutum HOM05D005761 ORTHO05D007286 2.5e-65 252.3 141 87.9
Atru.chr5.1334 Acer truncatum HOM05D005761 ORTHO05D007286 3.2e-65 251.9 141 86.5
Gohir.A10G081800 Gossypium hirsutum HOM05D005761 ORTHO05D007286 3.2e-65 251.9 155 80.0
Rhsim08G0224400 Rhododendron simsii HOM05D005761 ORTHO05D007286 3.2e-65 251.9 160 78.8
CSS0019454 Camellia sinensis var. sinensis HOM05D005761 ORTHO05D007286 4.2e-65 251.5 160 80.0
CSS0045926 Camellia sinensis var. sinensis HOM05D005761 ORTHO05D007286 4.2e-65 251.5 160 80.0
vmacro18882 Vaccinium macrocarpon HOM05D005761 ORTHO05D007286 7.2e-65 250.8 156 78.8
Manes.04G130300 Manihot esculenta HOM05D005761 ORTHO05D007286 9.4e-65 250.4 141 86.5
COL.COLO4_30441 Corchorus olitorius HOM05D005761 ORTHO05D007286 1.6e-64 249.6 141 85.8
Eucgr.F03043 Eucalyptus grandis HOM05D005761 ORTHO05D007286 1.6e-64 249.6 160 77.5
arahy.Tifrunner.gnm1.ann1.QAD112 Arachis hypogaea HOM05D005761 ORTHO05D007286 2.1e-64 249.2 141 86.5
MSTRG.22659 Avicennia marina HOM05D005761 ORTHO05D007286 2.7e-64 248.8 141 83.7
Atru.chr5.1303 Acer truncatum HOM05D005761 ORTHO05D007286 3.6e-64 248.4 160 77.5
Duzib192G1004 Durio zibethinus HOM05D005761 ORTHO05D007286 4.7e-64 248.1 141 85.8
Gorai.011G073900 Gossypium raimondii HOM05D005761 ORTHO05D007286 4.7e-64 248.1 155 78.1
arahy.Tifrunner.gnm1.ann1.IDML3X Arachis hypogaea HOM05D005761 ORTHO05D007286 6.1e-64 247.7 141 85.8
Gohir.D10G069650 Gossypium hirsutum HOM05D005761 ORTHO05D007286 6.1e-64 247.7 155 78.1
Lj5A57G74 Lonicera japonica HOM05D005761 ORTHO05D007286 6.1e-64 247.7 141 85.1
Prupe.6G357100 Prunus persica HOM05D005761 ORTHO05D007286 6.1e-64 247.7 160 79.4
Thecc.06G093100 Theobroma cacao HOM05D005761 ORTHO05D007286 6.1e-64 247.7 141 85.8
Hma1.2p1_1195F.1_g265890 Hydrangea macrophylla HOM05D005761 ORTHO05D007286 8.0e-64 247.3 141 85.8
RcHm_v2.0_Chr2g0139151 Rosa chinensis HOM05D005761 ORTHO05D007286 1.0e-63 246.9 160 76.9
TWI75G0371 Tripterygium wilfordii HOM05D005761 ORTHO05D007286 1.0e-63 246.9 159 75.5
TWI12G1054 Tripterygium wilfordii HOM05D005761 ORTHO05D007286 1.4e-63 246.5 155 75.5
EL10Ac9g22057 Beta vulgaris HOM05D005761 ORTHO05D007286 1.8e-63 246.1 141 85.1
DCAR_016208 Daucus carota HOM05D005761 ORTHO05D007286 1.8e-63 246.1 163 74.8
Sabra01G0154700 Salix brachista HOM05D005761 ORTHO05D007286 1.8e-63 246.1 142 85.2
Haze_16351 Corylus avellana HOM05D005761 ORTHO05D007286 2.3e-63 245.7 159 76.7
Psat2g181000 Pisum sativum HOM05D005761 ORTHO05D007286 2.3e-63 245.7 141 83.7
CiPaw.01G235200 Carya illinoinensis HOM05D005761 ORTHO05D007286 4.0e-63 245.0 159 77.4
Dinv38013 Davidia involucrata HOM05D005761 ORTHO05D007286 4.0e-63 245.0 141 83.7
MD17G1190700 Malus domestica HOM05D005761 ORTHO05D007286 4.0e-63 245.0 159 76.1
Lj3g0012819 Lotus japonicus HOM05D005761 ORTHO05D007286 5.2e-63 244.6 141 83.7
Cfa014791 Carpinus fangiana HOM05D005761 ORTHO05D007286 6.8e-63 244.2 155 78.1
FvH4_6g31840 Fragaria vesca HOM05D005761 ORTHO05D007286 6.8e-63 244.2 156 77.6
FAN14G3194 Fragaria x ananassa HOM05D005761 ORTHO05D007286 6.8e-63 244.2 156 77.6
Nn3g18106 Nelumbo nucifera HOM05D005761 ORTHO05D007286 6.8e-63 244.2 141 83.7
Cpa.g.sc33.106 Carica papaya HOM05D005761 ORTHO05D007286 1.5e-62 243.0 141 83.7
Nn2g11672 Nelumbo nucifera HOM05D005761 ORTHO05D007286 1.5e-62 243.0 141 83.0
unitig_37.g12255 Utricularia gibba HOM05D005761 ORTHO05D007286 1.5e-62 243.0 141 83.0
Lalb_Chr25g0280001 Lupinus albus HOM05D005761 ORTHO05D007286 2.6e-62 242.3 154 76.6
PSO063G2446 Papaver somniferum HOM05D005761 ORTHO05D007286 2.6e-62 242.3 141 82.3
FAN09G1691 Fragaria x ananassa HOM05D005761 ORTHO05D007286 3.4e-62 241.9 155 76.8
Sc12g0009490 Simmondsia chinensis HOM05D005761 ORTHO05D007286 3.4e-62 241.9 141 83.7
SGA_v2.0_scaffold5G02550 Striga asiatica HOM05D005761 ORTHO05D007286 3.4e-62 241.9 159 76.1
PSO170G4248 Papaver somniferum HOM05D005761 ORTHO05D007286 4.4e-62 241.5 141 81.6
Potri.003G052000 Populus trichocarpa HOM05D005761 ORTHO05D007286 4.4e-62 241.5 151 77.5
ATR0315G131 Amborella trichopoda HOM05D005761 ORTHO05D007286 5.7e-62 241.1 137 81.8
Oeu059462.1 Olea europaea HOM05D005761 ORTHO05D007286 5.7e-62 241.1 179 71.5
QL05p021523 Quercus lobata HOM05D005761 ORTHO05D007286 5.7e-62 241.1 158 75.3
Ca_06670_v3 Cicer arietinum L. HOM05D005761 ORTHO05D007286 7.5e-62 240.7 141 83.0
Lj9C509G5 Lonicera japonica HOM05D003521 ORTHO05D000476 7.5e-62 240.7 161 77.0
SGA_v2.0_scaffold80G25854 Striga asiatica HOM05D005761 ORTHO05D007286 7.5e-62 240.7 159 75.5
Glyma.08G204400 Glycine max HOM05D005761 ORTHO05D007286 9.8e-62 240.4 160 74.4
Ciclev10022630m.g Citrus clementina HOM05D005761 ORTHO05D007286 1.3e-61 240.0 141 80.9
Cfa002100 Carpinus fangiana HOM05D005761 ORTHO05D001133 1.7e-61 239.6 155 76.8
ClCG10G006430 Citrullus lanatus HOM05D005761 ORTHO05D007286 2.2e-61 239.2 159 80.5
Sed0000486 Sechium edule HOM05D005761 ORTHO05D007286 2.2e-61 239.2 159 73.0
MBI01_g30861_MAGBIO Magnolia biondii HOM05D005761 ORTHO05D007286 2.8e-61 238.8 141 80.9
PGR102G2101 Punica granatum HOM05D005761 ORTHO05D007286 2.8e-61 238.8 141 81.6
Cpa.g.sc37.42 Carica papaya HOM05D005761 ORTHO05D007286 6.3e-61 237.7 147 81.6
HanXRQChr09g0275451 Helianthus annuus HOM05D005761 ORTHO05D007286 6.3e-61 237.7 141 78.7
Lsat_1_v5_gn_4_103261 Lactuca sativa HOM05D005761 ORTHO05D007286 8.3e-61 237.3 141 77.3
DCAR_023065 Daucus carota HOM05D005761 ORTHO05D007286 1.1e-60 236.9 161 73.9
FAN05G4602 Fragaria x ananassa HOM05D005761 ORTHO05D007286 1.1e-60 236.9 155 75.5
CsaV3_3G005910 Cucumis sativus L. HOM05D005761 ORTHO05D007286 1.4e-60 236.5 159 71.7
Phvul.010G148400 Phaseolus vulgaris HOM05D005761 ORTHO05D007286 1.4e-60 236.5 141 82.3
Ah.01g005570 Amaranthus hybridus HOM05D005761 ORTHO05D001133 1.8e-60 236.1 165 72.1
CDE05G3104 Ceratophyllum demersum HOM05D005761 ORTHO05D007286 2.4e-60 235.7 141 78.0
MELO3C016564.2 Cucumis melo HOM05D005761 ORTHO05D007286 2.4e-60 235.7 156 73.1
Migut.I00937 Erythranthe guttata HOM05D005761 ORTHO05D007286 2.4e-60 235.7 141 80.1
ClCG09G001920 Citrullus lanatus HOM05D005761 ORTHO05D007286 4.1e-60 235.0 141 78.7
AUR62016504 Chenopodium quinoa HOM05D005761 ORTHO05D007286 5.4e-60 234.6 144 80.6
Zm00001eb237310 Zea mays HOM05D005761 ORTHO05D007286 5.4e-60 234.6 137 78.8
Os02g0275100 Oryza sativa ssp. japonica HOM05D005761 ORTHO05D007286 7.0e-60 234.2 137 78.8
TAR624G1072 Trochodendron aralioides HOM05D005761 ORTHO05D007286 9.1e-60 233.8 141 80.1
RcHm_v2.0_Chr2g0139101 Rosa chinensis HOM05D005761 ORTHO05D007286 1.6e-59 233.0 159 73.6
THA.LOC104813554 Tarenaya hassleriana HOM05D005761 ORTHO05D007286 2.0e-59 232.6 159 71.7
PGR102G0188 Punica granatum HOM05D005761 ORTHO05D007286 2.7e-59 232.3 141 80.1
VMungo0464G1667 Vigna mungo HOM05D005761 ORTHO05D007286 4.5e-59 231.5 141 79.4
Medtr5g011180 Medicago truncatula HOM05D005761 ORTHO05D007286 1.3e-58 229.9 141 78.0
ECA232G2351 Erigeron canadensis HOM05D005761 ORTHO05D007286 1.7e-58 229.6 141 75.2
TPR.G19588 Trifolium pratense HOM05D005761 ORTHO05D007286 1.7e-58 229.6 157 73.2
GSVIVG01017058001 Vitis vinifera HOM05D005761 ORTHO05D007286 5.0e-58 228.0 141 75.9
HPP92_024576 Vanilla planifolia HOM05D005761 ORTHO05D007286 3.3e-57 225.3 137 77.4
Rhsim09G0202300 Rhododendron simsii HOM05D005761 ORTHO05D007286 4.2e-57 224.9 141 78.0
Aa31LG5G21060 Aethionema arabicum HOM05D000113 ORTHO05D001108 2.8e-56 222.2 161 69.6
Sp1g13540 Schrenkiella parvula HOM05D005761 ORTHO05D007286 6.8e-55 217.6 160 70.0
Thhalv10008971m.g Eutrema salsugineum HOM05D005761 ORTHO05D007286 2.6e-54 215.7 141 73.8
Carub.0001s1498 Capsella rubella HOM05D005761 ORTHO05D007286 4.4e-54 214.9 160 66.9
BcaB03g13070 Brassica carinata HOM05D005761 ORTHO05D007286 5.7e-54 214.5 160 69.4
CARHR015750 Cardamine hirsuta HOM05D005761 ORTHO05D007286 8.3e-53 210.7 160 68.1
A06p11220 Brassica napus HOM05D005761 ORTHO05D007286 1.8e-52 209.5 157 68.8
BraA06t24302Z Brassica rapa HOM05D005761 ORTHO05D007286 1.8e-52 209.5 157 68.8
AL1G27310 Arabidopsis lyrata HOM05D005761 ORTHO05D007286 2.4e-52 209.1 160 65.6
C05p13350 Brassica napus HOM05D005761 ORTHO05D007286 3.2e-52 208.8 141 70.9
BcaC07g38774 Brassica carinata HOM05D005761 ORTHO05D007286 4.1e-52 208.4 141 70.9
A08p31680 Brassica napus HOM05D005761 ORTHO05D007286 5.4e-52 208.0 160 68.1
BraA08t35090Z Brassica rapa HOM05D005761 ORTHO05D007286 5.4e-52 208.0 160 68.1
BolC5t30072H Brassica oleracea HOM05D005761 ORTHO05D007286 7.0e-52 207.6 141 70.2
BolC8t49332H Brassica oleracea HOM05D005761 ORTHO05D007286 7.0e-52 207.6 160 67.5
C08p17060 Brassica napus HOM05D000103 ORTHO05D000049 9.2e-52 207.2 159 67.3
AT1G15220 Arabidopsis thaliana HOM05D005761 ORTHO05D007286 1.0e-50 203.8 160 64.4
SalBow2G2609 Salvia bowleyana HOM05D005761 ORTHO05D007286 1.7e-50 203.0 182 58.8
TAR636G0897 Trochodendron aralioides HOM05D005761 ORTHO05D007286 1.7e-50 203.0 115 84.3
CANSAT56G0921 Cannabis sativa HOM05D005761 ORTHO05D007286 3.9e-50 201.8 144 70.1
Duzib160G0104 Durio zibethinus HOM05D005761 ORTHO05D007286 2.0e-46 189.5 155 65.8
SHI11001 Sapria himalayana HOM05D005761 ORTHO05D007286 5.4e-44 181.4 151 58.3
SEGI_40479 Sequoiadendron giganteum HOM05D005761 ORTHO05D007286 2.7e-43 179.1 131 64.9
Actinidia32723 Actinidia chinensis HOM05D005761 ORTHO05D007286 1.0e-42 177.2 111 74.8
Cfa014792 Carpinus fangiana HOM05D005761 ORTHO05D007286 4.0e-39 165.2 112 70.5
BcaC05g25451 Brassica carinata HOM05D005761 ORTHO05D007286 1.9e-36 156.4 120 68.3
Glyma.07G019200 Glycine max HOM05D005761 ORTHO05D007286 5.4e-36 154.8 93 80.6
HanXRQChr05g0136521 Helianthus annuus HOM05D005761 ORTHO05D007286 8.6e-34 147.5 93 74.2
Mapoly0033s0089 Marchantia polymorpha HOM05D005761 ORTHO05D007286 1.1e-33 147.1 136 52.2
Pp3c3_29950 Physcomitrium patens HOM05D005761 ORTHO05D007286 2.5e-33 146.0 137 54.0
HanXRQChr10g0301331 Helianthus annuus HOM05D005761 ORTHO05D007286 7.6e-30 134.4 87 73.6
Sed0020064 Sechium edule HOM05D005761 ORTHO05D007286 6.4e-29 131.3 98 64.3
CBR_g32010 Chara braunii HOM05D005761 ORTHO05D007286 1.9e-28 129.8 141 48.2
Sopen03g039470 Solanum pennellii HOM05D005761 ORTHO05D007286 1.1e-25 120.6 77 77.9
HanXRQChr11g0333491 Helianthus annuus HOM05D005761 ORTHO05D007286 9.9e-22 107.5 112 50.0
HanXRQChr08g0232791 Helianthus annuus HOM05D005761 ORTHO05D007286 2.7e-19 99.4 112 46.4
Rhsim08G0224100 Rhododendron simsii HOM05D000414 ORTHO05D000276 4.4e-14 82.0 50 80.0
Rhsim08G0203300 Rhododendron simsii HOM05D005761 ORTHO05D007286 2.2e-13 79.7 48 77.1


User provided reference genes

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