Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0006309g0050 Nicotiana tabacum HOM05D008559 ORTHO05D011161 0.0e+00 1110.1 593 100.0
Nitab4.5_0002031g0130 Nicotiana tabacum HOM05D008559 ORTHO05D011161 9.1e-262 906.7 631 80.0
Nitab4.5_0003320g0020 Nicotiana tabacum HOM05D008559 ORTHO05D011161 9.2e-206 720.7 474 84.2
Nitab4.5_0001016g0050 Nicotiana tabacum HOM05D008559 ORTHO05D011161 2.9e-175 619.4 351 92.0
Nitab4.5_0000773g0010 Nicotiana tabacum HOM05D008559 ORTHO05D011161 2.7e-173 612.8 455 76.9
Nitab4.5_0000163g0050 Nicotiana tabacum HOM05D008559 ORTHO05D011161 2.4e-44 184.5 282 45.0
Nitab4.5_0013856g0010 Nicotiana tabacum HOM05D008559 ORTHO05D011161 1.2e-43 182.2 427 37.7
Nitab4.5_0004043g0020 Nicotiana tabacum HOM05D008559 ORTHO05D011161 6.3e-37 159.8 218 48.6
Nitab4.5_0000085g0030 Nicotiana tabacum HOM05D008559 ORTHO05D282264 9.4e-33 146.0 317 37.9
Nitab4.5_0000449g0040 Nicotiana tabacum HOM05D008559 ORTHO05D286507 2.5e-30 137.9 149 57.0
Nitab4.5_0002509g0020 Nicotiana tabacum HOM05D008559 ORTHO05D011161 6.9e-28 129.8 330 36.1
Nitab4.5_0013152g0020 Nicotiana tabacum HOM05D008559 ORTHO05D011161 2.9e-26 124.4 139 56.8
Nitab4.5_0000945g0060 Nicotiana tabacum HOM05D008559 ORTHO05D284281 4.2e-25 120.6 435 30.3
Nitab4.5_0000315g0130 Nicotiana tabacum HOM05D008559 ORTHO05D011161 6.1e-24 116.7 156 46.8
Nitab4.5_0004792g0020 Nicotiana tabacum HOM05D008559 ORTHO05D011161 1.1e-22 112.5 217 40.6
Nitab4.5_0004542g0010 Nicotiana tabacum HOM05D008559 ORTHO05D011161 2.6e-22 111.3 174 43.1
Nitab4.5_0000311g0110 Nicotiana tabacum HOM05D008559 ORTHO05D011161 3.3e-22 110.9 147 47.6
Nitab4.5_0002719g0010 Nicotiana tabacum HOM05D014863 ORTHO05D011161 2.2e-21 108.2 183 42.1
Nitab4.5_0004380g0010 Nicotiana tabacum HOM05D008559 ORTHO05D011161 4.8e-21 107.1 146 48.6
Nitab4.5_0000493g0110 Nicotiana tabacum HOM05D008559 ORTHO05D011161 4.1e-20 104.0 109 56.9
Nitab4.5_0000719g0070 Nicotiana tabacum HOM05D008559 ORTHO05D011161 5.3e-20 103.6 95 62.1
Nitab4.5_0004318g0020 Nicotiana tabacum HOM05D008559 ORTHO05D011161 1.2e-19 102.4 105 58.1
Nitab4.5_0000338g0200 Nicotiana tabacum HOM05D008559 ORTHO05D011161 8.5e-18 96.3 75 72.0
Nitab4.5_0000587g0010 Nicotiana tabacum HOM05D008559 ORTHO05D284510 1.9e-17 95.1 133 45.1
Nitab4.5_0000700g0040 Nicotiana tabacum HOM05D008559 ORTHO05D011161 1.9e-17 95.1 176 37.5
Nitab4.5_0002173g0030 Nicotiana tabacum HOM05D014863 ORTHO05D011161 3.2e-17 94.4 179 36.9
Nitab4.5_0000030g0030 Nicotiana tabacum HOM05D008559 ORTHO05D011161 1.2e-16 92.4 165 40.0
Nitab4.5_0007191g0010 Nicotiana tabacum HOM05D008559 ORTHO05D286381 1.6e-16 92.0 122 48.4
Nitab4.5_0000206g0150 Nicotiana tabacum HOM05D008559 ORTHO05D011161 2.7e-16 91.3 100 51.0
Nitab4.5_0000337g0190 Nicotiana tabacum HOM05D014863 ORTHO05D011161 3.9e-15 87.4 122 45.1
Nitab4.5_0000157g0320 Nicotiana tabacum HOM05D008559 ORTHO05D011161 2.0e-14 85.1 154 40.9
Nitab4.5_0000290g0050 Nicotiana tabacum HOM05D008559 ORTHO05D011161 9.7e-14 82.8 337 30.3
Nitab4.5_0000431g0120 Nicotiana tabacum HOM05D014863 ORTHO05D011161 1.7e-13 82.0 157 35.7
Nitab4.5_0013152g0010 Nicotiana tabacum HOM05D000015 ORTHO05D000803 8.2e-13 79.7 291 33.3
Nitab4.5_0011991g0020 Nicotiana tabacum HOM05D002983 ORTHO05D003451 1.4e-12 79.0 99 51.5
Nitab4.5_0002100g0090 Nicotiana tabacum HOM05D008559 ORTHO05D011161 2.4e-12 78.2 109 48.6
PGSC0003DMG400041497 Solanum tuberosum HOM05D008559 ORTHO05D026183 3.1e-12 77.8 149 34.9
Nitab4.5_0000104g0250 Nicotiana tabacum HOM05D008559 ORTHO05D011161 7.0e-12 76.6 56 71.4
PGSC0003DMG400021037 Solanum tuberosum HOM05D008559 ORTHO05D026183 2.0e-11 75.1 118 36.4
Nitab4.5_0000107g0080 Nicotiana tabacum HOM05D008559 ORTHO05D283367 1.0e-10 72.8 70 57.1
PGSC0003DMG400042155 Solanum tuberosum HOM05D008559 ORTHO05D026183 1.0e-10 72.8 90 40.0
Nitab4.5_0000257g0050 Nicotiana tabacum HOM05D014863 ORTHO05D011161 5.0e-10 70.5 272 29.4
Solyc11g039800.2 Solanum lycopersicum HOM05D008559 ORTHO05D026183 6.5e-10 70.1 91 39.6
Nitab4.5_0002970g0010 Nicotiana tabacum HOM05D015872 ORTHO05D285633 1.9e-09 68.6 93 38.7
Nitab4.5_0000378g0020 Nicotiana tabacum HOM05D019424 ORTHO05D283319 2.5e-09 68.2 313 24.9
Nitab4.5_0010778g0040 Nicotiana tabacum HOM05D014647 ORTHO05D282938 2.1e-08 65.1 107 39.3
Nitab4.5_0000006g0060 Nicotiana tabacum HOM05D008559 ORTHO05D283084 2.7e-08 64.7 163 31.3
Nitab4.5_0011107g0010 Nicotiana tabacum HOM05D019424 ORTHO05D285801 2.3e-07 61.6 234 28.6
Nitab4.5_0006081g0020 Nicotiana tabacum HOM05D014863 ORTHO05D011161 6.8e-07 60.1 58 55.2
Nitab4.5_0001593g0020 Nicotiana tabacum HOM05D008559 ORTHO05D007738 1.2e-06 59.3 258 27.9
Nitab4.5_0003801g0010 Nicotiana tabacum HOM05D008559 ORTHO05D284261 3.4e-06 57.8 113 31.9
Nitab4.5_0001881g0070 Nicotiana tabacum HOM05D002918 ORTHO05D003326 5.7e-06 57.0 303 26.4


User provided reference genes

Program Settings