Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0006291g0010 Nicotiana tabacum HOM05D007028 ORTHO05D003658 1.8e-111 406.0 207 100.0
Nitab4.5_0001454g0010 Nicotiana tabacum HOM05D007028 ORTHO05D003658 2.1e-96 355.9 207 89.4
PGSC0003DMG402014197 Solanum tuberosum HOM05D007028 ORTHO05D003658 1.9e-89 332.8 217 81.6
Peaxi162Scf00332g00034 Petunia axillaris HOM05D007028 ORTHO05D003658 1.3e-85 320.1 217 81.1
Sopen03g036070 Solanum pennellii HOM05D007028 ORTHO05D003658 8.2e-85 317.4 217 79.3
Solyc03g117170.1 Solanum lycopersicum HOM05D007028 ORTHO05D003658 2.4e-84 315.8 217 77.9
Cfa001903 Carpinus fangiana HOM05D007028 ORTHO05D003658 1.9e-36 156.8 211 47.9
Cc04_g04860 Coffea canephora HOM05D007028 ORTHO05D003658 7.8e-35 151.4 221 45.2
Thecc.06G037900 Theobroma cacao HOM05D007028 ORTHO05D003658 1.1e-33 147.5 228 43.9
Prupe.3G095700 Prunus persica HOM05D007028 ORTHO05D003658 1.9e-33 146.7 238 39.9
FAN02G1822 Fragaria x ananassa HOM05D007028 ORTHO05D003658 1.2e-32 144.1 223 41.7
DCAR_007440 Daucus carota HOM05D007028 ORTHO05D003658 1.6e-32 143.7 204 44.1
Cpa.g.sc10.116 Carica papaya HOM05D007028 ORTHO05D003658 8.0e-32 141.4 208 46.2
Dinv23308 Davidia involucrata HOM05D007028 ORTHO05D010012 1.4e-31 140.6 165 49.1
Aqoxy7G01883 Aquilegia oxysepala HOM05D007028 ORTHO05D003658 5.2e-31 138.7 207 43.5
TPR.G19149 Trifolium pratense HOM05D007028 ORTHO05D003658 1.2e-30 137.5 237 38.4
Medtr2g104800 Medicago truncatula HOM05D007028 ORTHO05D003658 1.5e-30 137.1 237 38.0
COL.COLO4_26654 Corchorus olitorius HOM05D007028 ORTHO05D003658 2.0e-30 136.7 224 43.3
Ca_01026_v3 Cicer arietinum L. HOM05D007028 ORTHO05D003658 2.6e-30 136.3 231 39.0
Oeu010371.1 Olea europaea HOM05D007028 ORTHO05D003658 4.4e-30 135.6 209 44.0
FAN14G4516 Fragaria x ananassa HOM05D007028 ORTHO05D003658 5.8e-30 135.2 222 42.3
Gohir.A05G120800 Gossypium hirsutum HOM05D007028 ORTHO05D003658 5.8e-30 135.2 235 40.4
FAN09G0870 Fragaria x ananassa HOM05D007028 ORTHO05D003658 4.9e-29 132.1 223 41.7
MD17G1220000 Malus domestica HOM05D007028 ORTHO05D003658 4.9e-29 132.1 224 39.7
Gorai.009G125300 Gossypium raimondii HOM05D007028 ORTHO05D003658 1.1e-28 131.0 235 38.7
Actinidia25445 Actinidia chinensis HOM05D007028 ORTHO05D010012 1.4e-28 130.6 203 42.9
FAN05G3224 Fragaria x ananassa HOM05D007028 ORTHO05D003658 1.4e-28 130.6 224 42.0
FvH4_6g28900 Fragaria vesca HOM05D007028 ORTHO05D003658 3.2e-28 129.4 222 39.2
Gohir.D05G121800 Gossypium hirsutum HOM05D007028 ORTHO05D003658 3.2e-28 129.4 240 37.9
Potri.003G179600 Populus trichocarpa HOM05D007028 ORTHO05D003658 2.7e-27 126.3 206 40.3
QL05p034297 Quercus lobata HOM05D007028 ORTHO05D003658 3.0e-26 122.9 178 41.6
arahy.Tifrunner.gnm1.ann1.SE9SAL Arachis hypogaea HOM05D007028 ORTHO05D003658 1.1e-25 120.9 212 37.3
Lsat_1_v5_gn_8_100120 Lactuca sativa HOM05D007028 ORTHO05D003658 4.3e-25 119.0 205 40.5
Glyma.13G369200 Glycine max HOM05D007028 ORTHO05D003658 7.3e-25 118.2 237 38.8
VMungo1080G1428 Vigna mungo HOM05D007028 ORTHO05D003658 7.3e-25 118.2 226 38.1
Glyma.15G004600 Glycine max HOM05D007028 ORTHO05D003658 9.5e-25 117.9 243 38.7
HanXRQChr08g0235831 Helianthus annuus HOM05D007028 ORTHO05D003658 1.2e-24 117.5 205 40.5
Phvul.005G180900 Phaseolus vulgaris HOM05D007028 ORTHO05D003658 1.1e-23 114.4 231 35.9
Lj3g0003871 Lotus japonicus HOM05D007028 ORTHO05D003658 4.0e-23 112.5 217 36.4
ATR0749G015 Amborella trichopoda HOM05D007028 ORTHO05D003658 5.2e-23 112.1 209 39.2
Ciclev10027378m.g Citrus clementina HOM05D007028 ORTHO05D003658 5.2e-23 112.1 98 56.1
Manes.11G063900 Manihot esculenta HOM05D007028 ORTHO05D003658 6.8e-23 111.7 207 36.2
Migut.D01094 Erythranthe guttata HOM05D007028 ORTHO05D003658 7.5e-22 108.2 216 38.0
Migut.I00721 Erythranthe guttata HOM05D007028 ORTHO05D003658 9.2e-20 101.3 116 45.7
Actinidia18232 Actinidia chinensis HOM05D007028 ORTHO05D003658 3.5e-19 99.4 59 76.3
MBI04_g44678_MAGBIO Magnolia biondii HOM05D007028 ORTHO05D003658 5.1e-18 95.5 218 35.8
Potri.001G048400 Populus trichocarpa HOM05D007028 ORTHO05D003658 2.8e-16 89.7 203 35.0
ATR0215G020 Amborella trichopoda HOM05D007028 ORTHO05D003658 1.8e-15 87.0 98 42.9
Glyma.19G251200 Glycine max HOM05D007028 ORTHO05D003658 2.4e-15 86.7 111 39.6
ATR0215G032 Amborella trichopoda HOM05D007028 ORTHO05D003658 3.1e-15 86.3 67 55.2
Lj1g0008030 Lotus japonicus HOM05D007028 ORTHO05D003658 1.2e-14 84.3 105 39.0
COL.COLO4_04560 Corchorus olitorius HOM05D007028 ORTHO05D003658 4.4e-14 82.4 114 40.4
Lj2C51T14 Lonicera japonica HOM05D007028 ORTHO05D003658 7.6e-14 81.6 67 52.2
Glyma.03G253700 Glycine max HOM05D007028 ORTHO05D003658 9.9e-14 81.3 168 31.5
arahy.Tifrunner.gnm1.ann1.RXM0S4 Arachis hypogaea HOM05D007028 ORTHO05D003658 1.3e-13 80.9 67 44.8
Manes.09G183300 Manihot esculenta HOM05D007028 ORTHO05D003658 2.2e-13 80.1 108 38.9
Sopen09g023970 Solanum pennellii HOM05D007028 ORTHO05D003658 4.9e-13 79.0 67 47.8
Cpa.g.sc8.155 Carica papaya HOM05D007028 ORTHO05D003658 6.4e-13 78.6 67 47.8
Peaxi162Scf00107g00204 Petunia axillaris HOM05D007028 ORTHO05D003658 6.4e-13 78.6 64 48.4
PGSC0003DMG400046108 Solanum tuberosum HOM05D007028 ORTHO05D003658 6.4e-13 78.6 64 48.4
Solyc09g061240.1 Solanum lycopersicum HOM05D007028 ORTHO05D003658 8.4e-13 78.2 87 43.7
Medtr7g057900 Medicago truncatula HOM05D007028 ORTHO05D003658 1.1e-12 77.8 67 46.3
Ciclev10013422m.g Citrus clementina HOM05D007028 ORTHO05D003658 1.4e-12 77.4 67 50.7
Cc01_g17020 Coffea canephora HOM05D007028 ORTHO05D003658 1.4e-12 77.4 112 35.7
Actinidia09481 Actinidia chinensis HOM05D007028 ORTHO05D003658 1.9e-12 77.0 67 47.8
Cfa002571 Carpinus fangiana HOM05D007028 ORTHO05D003658 1.9e-12 77.0 67 47.8
Manes.08G105400 Manihot esculenta HOM05D007028 ORTHO05D003658 2.4e-12 76.6 91 38.5
Eucgr.H01353 Eucalyptus grandis HOM05D007028 ORTHO05D003658 3.2e-12 76.3 100 39.0
VMungo1383G2132 Vigna mungo HOM05D007028 ORTHO05D003658 3.2e-12 76.3 86 37.2
Hma1.2p1_0226F.1_g095710 Hydrangea macrophylla HOM05D007028 ORTHO05D003658 4.2e-12 75.9 180 31.1
TPR.G23292 Trifolium pratense HOM05D007028 ORTHO05D003658 4.2e-12 75.9 67 46.3
Oeu043137.1 Olea europaea HOM05D007028 ORTHO05D003658 9.2e-12 74.7 67 43.3
Psat5g168520 Pisum sativum HOM05D007028 ORTHO05D003658 9.2e-12 74.7 75 38.7
TAR633G1987 Trochodendron aralioides HOM05D007028 ORTHO05D003658 9.2e-12 74.7 87 41.4
Os06g0568400 Oryza sativa ssp. japonica HOM05D007028 ORTHO05D003658 1.6e-11 73.9 79 46.8
Sed0022017 Sechium edule HOM05D007028 ORTHO05D003658 2.1e-11 73.6 67 40.3
Zm00001eb385060 Zea mays HOM05D007028 ORTHO05D003658 2.1e-11 73.6 221 29.4
Gohir.A11G138300 Gossypium hirsutum HOM05D007028 ORTHO05D003658 3.5e-11 72.8 186 31.2
QL09p054524 Quercus lobata HOM05D007028 ORTHO05D003658 3.5e-11 72.8 67 46.3
Sabra01G0033500 Salix brachista HOM05D007028 ORTHO05D003658 4.6e-11 72.4 53 56.6
Actinidia37594 Actinidia chinensis HOM05D007028 ORTHO05D003658 6.0e-11 72.0 59 50.8
arahy.Tifrunner.gnm1.ann1.W3CHFV Arachis hypogaea HOM05D007028 ORTHO05D003658 6.0e-11 72.0 156 25.0
CsaV3_7G025940 Cucumis sativus L. HOM05D007028 ORTHO05D003658 6.0e-11 72.0 67 41.8
Glyma.03G080500 Glycine max HOM05D007028 ORTHO05D003658 6.0e-11 72.0 87 41.4
Thecc.01G225600 Theobroma cacao HOM05D007028 ORTHO05D003658 6.0e-11 72.0 118 34.7
MELO3C021015.2 Cucumis melo HOM05D007028 ORTHO05D003658 1.0e-10 71.2 67 41.8
Lsat_1_v5_gn_5_122320 Lactuca sativa HOM05D002002 ORTHO05D003658 1.0e-10 71.2 71 42.3
Nitab4.5_0003312g0020 Nicotiana tabacum HOM05D007028 ORTHO05D003658 1.0e-10 71.2 64 43.8
Cpa.g.sc136.48 Carica papaya HOM05D002002 ORTHO05D003658 2.3e-10 70.1 80 41.2
CsaV3_2G024930 Cucumis sativus L. HOM05D002002 ORTHO05D003658 2.3e-10 70.1 70 42.9
Lsat_1_v5_gn_8_3220 Lactuca sativa HOM05D007028 ORTHO05D003658 2.3e-10 70.1 67 44.8
Potri.002G242400 Populus trichocarpa HOM05D007028 ORTHO05D003658 3.0e-10 69.7 112 33.0
DCAR_005532 Daucus carota HOM05D007028 ORTHO05D003658 3.9e-10 69.3 187 30.5
Migut.M00058 Erythranthe guttata HOM05D002002 ORTHO05D003658 5.1e-10 68.9 89 37.1
Lsat_1_v5_gn_2_16281 Lactuca sativa HOM05D007028 ORTHO05D003658 5.1e-10 68.9 67 44.8
ClCG09G009040 Citrullus lanatus HOM05D007028 ORTHO05D003658 6.6e-10 68.6 67 37.3
Gorai.007G154400 Gossypium raimondii HOM05D007028 ORTHO05D003658 6.6e-10 68.6 176 27.3
DCAR_019665 Daucus carota HOM05D002002 ORTHO05D003658 8.7e-10 68.2 77 40.3
HanXRQChr10g0306811 Helianthus annuus HOM05D002002 ORTHO05D003658 8.7e-10 68.2 102 35.3
Actinidia23722 Actinidia chinensis HOM05D007814 ORTHO05D009902 1.1e-09 67.8 146 31.5
Dinv19203 Davidia involucrata HOM05D007028 ORTHO05D003658 1.1e-09 67.8 201 27.9
Haze_24802 Corylus avellana HOM05D007028 ORTHO05D003658 1.5e-09 67.4 132 31.8
MD10G1164400 Malus domestica HOM05D007028 ORTHO05D003658 1.5e-09 67.4 132 28.8
Aqoxy6G00290 Aquilegia oxysepala HOM05D002002 ORTHO05D003658 1.9e-09 67.0 69 42.0
MBI10_g11201_MAGBIO Magnolia biondii HOM05D002002 ORTHO05D003658 1.9e-09 67.0 69 44.9
MD05G1175300 Malus domestica HOM05D007028 ORTHO05D003658 1.9e-09 67.0 132 27.3
Sed0021898 Sechium edule HOM05D002002 ORTHO05D003658 1.9e-09 67.0 90 36.7
MELO3C010690.2 Cucumis melo HOM05D002002 ORTHO05D003658 2.5e-09 66.6 155 29.0
ClCG08G017700 Citrullus lanatus HOM05D002002 ORTHO05D003658 3.3e-09 66.2 70 40.0
Gohir.D11G144200 Gossypium hirsutum HOM05D007028 ORTHO05D003658 3.3e-09 66.2 176 26.7
Peaxi162Scf00047g02117 Petunia axillaris HOM05D002002 ORTHO05D003658 3.3e-09 66.2 76 40.8
Oeu034272.1 Olea europaea HOM05D002002 ORTHO05D003658 7.3e-09 65.1 204 28.9
Oeu034273.1 Olea europaea HOM05D002002 ORTHO05D003658 7.3e-09 65.1 204 28.9
AagrBONN_evm.TU.Sc2ySwM_362.219 Anthoceros agrestis HOM05D005780 ORTHO05D007289 9.6e-09 64.7 78 41.0
DCAR_024430 Daucus carota HOM05D002002 ORTHO05D008711 9.6e-09 64.7 69 39.1
MSTRG.14910 Avicennia marina HOM05D002002 ORTHO05D003658 1.2e-08 64.3 208 29.3
Migut.N00615 Erythranthe guttata HOM05D007028 ORTHO05D003658 1.2e-08 64.3 138 32.6
Prupe.1G244300 Prunus persica HOM05D002002 ORTHO05D003658 1.2e-08 64.3 143 28.7
Cc05_g02030 Coffea canephora HOM05D002002 ORTHO05D003658 1.6e-08 63.9 204 28.4
Gohir.A07G193000 Gossypium hirsutum HOM05D002002 ORTHO05D003658 1.6e-08 63.9 76 43.4
MBI15_g44612_MAGBIO Magnolia biondii HOM05D002002 ORTHO05D003658 1.6e-08 63.9 91 37.4
TAR627G0575 Trochodendron aralioides HOM05D003572 ORTHO05D004118 1.6e-08 63.9 75 40.0
Ciclev10023784m.g Citrus clementina HOM05D007028 ORTHO05D003658 3.6e-08 62.8 153 30.1
Lsat_1_v5_gn_9_12301 Lactuca sativa HOM05D007028 ORTHO05D003658 3.6e-08 62.8 170 28.8
Nitab4.5_0000045g0190 Nicotiana tabacum HOM05D007028 ORTHO05D003658 3.6e-08 62.8 195 30.3
Cfa014206 Carpinus fangiana HOM05D002002 ORTHO05D003658 4.7e-08 62.4 76 42.1
ATR0824G058 Amborella trichopoda HOM05D002002 ORTHO05D003658 6.2e-08 62.0 99 33.3
Peaxi162Scf00128g00135 Petunia axillaris HOM05D002002 ORTHO05D008711 6.2e-08 62.0 98 36.7
Aqoxy5G03765 Aquilegia oxysepala HOM05D002002 ORTHO05D003658 8.1e-08 61.6 102 33.3
DCAR_021086 Daucus carota HOM05D002002 ORTHO05D003658 1.4e-07 60.8 157 29.9
Nitab4.5_0013754g0020 Nicotiana tabacum HOM05D002002 ORTHO05D003658 1.4e-07 60.8 76 39.5
Gohir.D02G158850 Gossypium hirsutum HOM05D002002 ORTHO05D003658 1.8e-07 60.5 69 37.7
Cc11_g15730 Coffea canephora HOM05D002002 ORTHO05D008711 2.4e-07 60.1 69 37.7
Atru.chr11.2098 Acer truncatum HOM05D002002 ORTHO05D003658 3.1e-07 59.7 124 30.6
Manes.12G063951 Manihot esculenta HOM05D002002 ORTHO05D003658 3.1e-07 59.7 98 33.7
Lj3C1058T7 Lonicera japonica HOM05D002002 ORTHO05D008711 4.0e-07 59.3 69 43.5
CAN.G832.2 Capsicum annuum HOM05D002002 ORTHO05D008711 5.3e-07 58.9 69 37.7
Eucgr.B03286 Eucalyptus grandis HOM05D002002 ORTHO05D003658 5.3e-07 58.9 69 39.1
ECA234G3591 Erigeron canadensis HOM05D002002 ORTHO05D003658 6.9e-07 58.5 162 27.2
COL.COLO4_24276 Corchorus olitorius HOM05D002002 ORTHO05D008711 9.0e-07 58.2 69 37.7
FAN02G4604 Fragaria x ananassa HOM05D002002 ORTHO05D003658 9.0e-07 58.2 69 39.1
Potri.010G046225 Populus trichocarpa HOM05D002002 ORTHO05D003658 9.0e-07 58.2 68 36.8
Haze_12247 Corylus avellana HOM05D002002 ORTHO05D008711 1.2e-06 57.8 69 37.7
FvH4_6g24840 Fragaria vesca HOM05D002002 ORTHO05D003658 1.2e-06 57.8 69 39.1
RcHm_v2.0_Chr4g0432961 Rosa chinensis HOM05D002002 ORTHO05D008711 1.2e-06 57.8 101 32.7
Ciclev10033784m.g Citrus clementina HOM05D002002 ORTHO05D003658 1.5e-06 57.4 74 36.5
Gohir.A03G135305 Gossypium hirsutum HOM05D002002 ORTHO05D003658 1.5e-06 57.4 141 26.2
Manes.12G044800 Manihot esculenta HOM05D007028 ORTHO05D003658 1.5e-06 57.4 155 29.0
Cpa.g.sc33.19 Carica papaya HOM05D002002 ORTHO05D008711 2.0e-06 57.0 67 37.3
DCAR_031154 Daucus carota HOM05D002002 ORTHO05D003658 2.0e-06 57.0 69 37.7
FAN14G2025 Fragaria x ananassa HOM05D002002 ORTHO05D003658 2.0e-06 57.0 69 39.1
Hma1.2p1_0160F.1_g071270 Hydrangea macrophylla HOM05D002002 ORTHO05D003658 2.0e-06 57.0 69 37.7
Oeu023068.1 Olea europaea HOM05D002002 ORTHO05D003658 2.0e-06 57.0 78 37.2
TAR374G1279 Trochodendron aralioides HOM05D002002 ORTHO05D003658 2.0e-06 57.0 69 40.6
COL.COLO4_19649 Corchorus olitorius HOM05D002002 ORTHO05D003658 2.6e-06 56.6 74 37.8
FAN05G0600 Fragaria x ananassa HOM05D002002 ORTHO05D003658 2.6e-06 56.6 69 37.7
FAN05G4965 Fragaria x ananassa HOM05D002002 ORTHO05D003658 2.6e-06 56.6 69 37.7
Nitab4.5_0001229g0060 Nicotiana tabacum HOM05D002002 ORTHO05D003658 2.6e-06 56.6 156 26.9
Sopen12g002150 Solanum pennellii HOM05D002002 ORTHO05D003658 2.6e-06 56.6 152 28.9
MD13G1101500 Malus domestica HOM05D002002 ORTHO05D003658 3.4e-06 56.2 80 33.8
Manes.12G023250 Manihot esculenta HOM05D002002 ORTHO05D003658 3.4e-06 56.2 76 34.2
QL03p058095 Quercus lobata HOM05D002002 ORTHO05D003658 3.4e-06 56.2 99 30.3
Sopen05g008380 Solanum pennellii HOM05D002002 ORTHO05D003658 3.4e-06 56.2 100 31.0
PGR102G0007 Punica granatum HOM05D002002 ORTHO05D003658 4.4e-06 55.8 69 36.2
TWI36G0682 Tripterygium wilfordii HOM05D002002 ORTHO05D003658 4.4e-06 55.8 136 28.7
Haze_12592 Corylus avellana HOM05D002002 ORTHO05D003658 5.8e-06 55.5 168 31.0
Dinv24784 Davidia involucrata HOM05D002002 ORTHO05D003658 5.8e-06 55.5 69 36.2
CSS0040170 Camellia sinensis var. sinensis HOM05D002002 ORTHO05D003658 7.6e-06 55.1 69 36.2
CANSAT01G1710 Cannabis sativa HOM05D002002 ORTHO05D003658 7.6e-06 55.1 142 28.2
Gohir.D07G199350 Gossypium hirsutum HOM05D002002 ORTHO05D003658 7.6e-06 55.1 157 29.3
Hma1.2p1_0629F.1_g192180 Hydrangea macrophylla HOM05D002002 ORTHO05D003658 9.9e-06 54.7 183 28.4
Lsat_1_v5_gn_8_152141 Lactuca sativa HOM05D002002 ORTHO05D008711 9.9e-06 54.7 61 37.7
Oeu056712.1 Olea europaea HOM05D002002 ORTHO05D013431 9.9e-06 54.7 69 34.8
Thecc.01G199000 Theobroma cacao HOM05D002002 ORTHO05D003658 9.9e-06 54.7 204 25.0
Thecc.02G259800 Theobroma cacao HOM05D002002 ORTHO05D003658 9.9e-06 54.7 69 34.8


User provided reference genes

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