Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0006281g0070 Nicotiana tabacum HOM05D006084 ORTHO05D007449 1.0e-48 196.4 101 100.0
Nitab4.5_0007141g0020 Nicotiana tabacum HOM05D006084 ORTHO05D007449 2.3e-32 142.1 74 97.3
Solyc02g086780.4 Solanum lycopersicum HOM05D006084 ORTHO05D007449 2.3e-32 142.1 77 92.2
Sopen02g031550 Solanum pennellii HOM05D006084 ORTHO05D007449 2.3e-32 142.1 77 92.2
PGSC0003DMG400000490 Solanum tuberosum HOM05D006084 ORTHO05D007449 2.3e-32 142.1 77 92.2
CAN.G206.22 Capsicum annuum HOM05D006084 ORTHO05D007449 6.7e-32 140.6 74 94.6
Peaxi162Scf00129g01228 Petunia axillaris HOM05D006084 ORTHO05D007449 1.5e-28 129.4 77 83.1
TAR371G1194 Trochodendron aralioides HOM05D006084 ORTHO05D007449 6.5e-27 124.0 74 85.1
Dinv33481 Davidia involucrata HOM05D006084 ORTHO05D007449 3.2e-26 121.7 74 81.1
Manes.17G116000 Manihot esculenta HOM05D006084 ORTHO05D007449 3.2e-26 121.7 74 82.4
Aqoxy3G02941 Aquilegia oxysepala HOM05D006084 ORTHO05D007449 7.2e-26 120.6 74 78.4
Hma1.2p1_0846F.1_g227700 Hydrangea macrophylla HOM05D006084 ORTHO05D007449 1.6e-25 119.4 74 79.7
Sc03g0007970 Simmondsia chinensis HOM05D006084 ORTHO05D007449 1.6e-25 119.4 77 74.0
GSVIVG01032459001 Vitis vinifera HOM05D006084 ORTHO05D007449 1.6e-25 119.4 74 79.7
Hma1.2p1_0056F.1_g031653 Hydrangea macrophylla HOM05D006084 ORTHO05D007449 2.1e-25 119.0 73 79.5
PGR142G2538 Punica granatum HOM05D006084 ORTHO05D007449 2.1e-25 119.0 74 78.4
PSO210G7688 Papaver somniferum HOM05D006084 ORTHO05D007449 2.7e-25 118.6 74 78.4
Rhsim08G0053800 Rhododendron simsii HOM05D006084 ORTHO05D007449 2.7e-25 118.6 74 79.7
CSS0000489 Camellia sinensis var. sinensis HOM05D006084 ORTHO05D007449 3.6e-25 118.2 74 79.7
CSS0035017 Camellia sinensis var. sinensis HOM05D006084 ORTHO05D007449 3.6e-25 118.2 74 79.7
Nn3g16859 Nelumbo nucifera HOM05D006084 ORTHO05D007449 3.6e-25 118.2 74 75.7
Glyma.04G247000 Glycine max HOM05D006084 ORTHO05D007449 4.6e-25 117.9 77 75.3
Hma1.2p1_1415F.1_g281960 Hydrangea macrophylla HOM05D006084 ORTHO05D007449 7.9e-25 117.1 74 78.4
Glyma.06G115700 Glycine max HOM05D006084 ORTHO05D007449 1.0e-24 116.7 85 70.6
Sabra16G0228900 Salix brachista HOM05D006084 ORTHO05D007449 1.0e-24 116.7 74 77.0
Atru.chr6.2220 Acer truncatum HOM05D006084 ORTHO05D007449 1.4e-24 116.3 74 78.4
EL10Ac3g07214 Beta vulgaris HOM05D006084 ORTHO05D007449 1.4e-24 116.3 77 72.7
ECA238G3069 Erigeron canadensis HOM05D006084 ORTHO05D007449 1.4e-24 116.3 77 74.0
HanXRQChr07g0198791 Helianthus annuus HOM05D006084 ORTHO05D007449 1.8e-24 115.9 77 74.0
Phvul.009G127800 Phaseolus vulgaris HOM05D006084 ORTHO05D007449 1.8e-24 115.9 74 75.7
Prupe.3G286100 Prunus persica HOM05D006084 ORTHO05D007449 3.0e-24 115.2 77 72.7
PSO782G1469 Papaver somniferum HOM05D006084 ORTHO05D007449 3.9e-24 114.8 74 77.0
QL02p076043 Quercus lobata HOM05D006084 ORTHO05D007449 3.9e-24 114.8 73 75.3
QL02p076078 Quercus lobata HOM05D006084 ORTHO05D007449 3.9e-24 114.8 73 75.3
ATR0730G058 Amborella trichopoda HOM05D006084 ORTHO05D007449 5.1e-24 114.4 74 75.7
Lalb_Chr10g0093921 Lupinus albus HOM05D006084 ORTHO05D007449 5.1e-24 114.4 74 73.0
HanXRQChr14g0450361 Helianthus annuus HOM05D006084 ORTHO05D007449 6.7e-24 114.0 85 68.2
MD17G1033600 Malus domestica HOM05D006084 ORTHO05D007449 6.7e-24 114.0 77 70.1
Cc07_g02120 Coffea canephora HOM05D006084 ORTHO05D007449 8.8e-24 113.6 74 71.6
Eucgr.I01785 Eucalyptus grandis HOM05D006084 ORTHO05D007449 8.8e-24 113.6 74 75.7
Potri.001G349500 Populus trichocarpa HOM05D006084 ORTHO05D007449 8.8e-24 113.6 74 73.0
Cfa007418 Carpinus fangiana HOM05D006084 ORTHO05D007449 1.1e-23 113.2 74 75.7
PSO566G0352 Papaver somniferum HOM05D006084 ORTHO05D007449 1.1e-23 113.2 84 66.7
Actinidia35746 Actinidia chinensis HOM05D006084 ORTHO05D007449 2.5e-23 112.1 74 77.0
COL.COLO4_28991 Corchorus olitorius HOM05D006084 ORTHO05D007449 3.3e-23 111.7 98 61.2
CDE08G0643 Ceratophyllum demersum HOM05D006084 ORTHO05D007449 4.3e-23 111.3 74 73.0
Lsat_1_v5_gn_2_91880 Lactuca sativa HOM05D006084 ORTHO05D007449 4.3e-23 111.3 100 59.0
CiPaw.03G039200 Carya illinoinensis HOM05D006084 ORTHO05D007449 5.7e-23 110.9 74 73.0
Ca_16579_v3 Cicer arietinum L. HOM05D006084 ORTHO05D007449 5.7e-23 110.9 74 75.7
Hund02345 Selenicereus undatus HOM05D006084 ORTHO05D007449 5.7e-23 110.9 74 73.0
ATR1096G027 Amborella trichopoda HOM05D006084 ORTHO05D007449 7.4e-23 110.5 72 73.6
Gohir.D07G227900 Gossypium hirsutum HOM05D006084 ORTHO05D007449 7.4e-23 110.5 77 71.4
Gohir.A07G221200 Gossypium hirsutum HOM05D006084 ORTHO05D007449 9.7e-23 110.2 74 73.0
CANSAT64G0964 Cannabis sativa HOM05D006084 ORTHO05D007449 1.3e-22 109.8 77 66.2
Haze_14684 Corylus avellana HOM05D006084 ORTHO05D007449 1.3e-22 109.8 73 74.0
RcHm_v2.0_Chr2g0172221 Rosa chinensis HOM05D006084 ORTHO05D007449 1.3e-22 109.8 73 72.6
Medtr3g088470 Medicago truncatula HOM05D006084 ORTHO05D007449 1.7e-22 109.4 74 73.0
MSTRG.3166 Avicennia marina HOM05D006084 ORTHO05D007449 2.2e-22 109.0 69 76.8
MELO3C005689.2 Cucumis melo HOM05D006084 ORTHO05D007449 2.2e-22 109.0 85 63.5
Migut.H00108 Erythranthe guttata HOM05D006084 ORTHO05D007449 2.8e-22 108.6 72 75.0
TPR.G13476 Trifolium pratense HOM05D006084 ORTHO05D007449 3.7e-22 108.2 74 73.0
HPP92_022049 Vanilla planifolia HOM05D006084 ORTHO05D007449 3.7e-22 108.2 74 71.6
FvH4_6g50830 Fragaria vesca HOM05D006084 ORTHO05D007449 4.8e-22 107.8 73 71.2
FAN02G2714 Fragaria x ananassa HOM05D006084 ORTHO05D007449 4.8e-22 107.8 73 71.2
arahy.Tifrunner.gnm1.ann1.2LS7ZQ Arachis hypogaea HOM05D006084 ORTHO05D007449 8.2e-22 107.1 75 69.3
arahy.Tifrunner.gnm1.ann1.48HX9C Arachis hypogaea HOM05D006084 ORTHO05D007449 8.2e-22 107.1 75 69.3
arahy.Tifrunner.gnm1.ann1.DMWP0X Arachis hypogaea HOM05D006084 ORTHO05D007449 8.2e-22 107.1 75 69.3
CsaV3_5G027340 Cucumis sativus L. HOM05D006084 ORTHO05D007449 8.2e-22 107.1 85 61.2
Thecc.04G011100 Theobroma cacao HOM05D006084 ORTHO05D007449 8.2e-22 107.1 74 75.7
AUR62031990 Chenopodium quinoa HOM05D006084 ORTHO05D007449 1.1e-21 106.7 77 67.5
unitig_746.g26552 Utricularia gibba HOM05D006084 ORTHO05D007449 1.1e-21 106.7 69 73.9
FAN14G2625 Fragaria x ananassa HOM05D006084 ORTHO05D007449 1.4e-21 106.3 73 69.9
TWI12G0619 Tripterygium wilfordii HOM05D006084 ORTHO05D007449 1.4e-21 106.3 73 75.3
FAN09G3162 Fragaria x ananassa HOM05D006084 ORTHO05D007449 1.8e-21 105.9 73 69.9
Lj1g0023236 Lotus japonicus HOM05D006084 ORTHO05D007449 1.8e-21 105.9 74 70.3
Sed0018290 Sechium edule HOM05D006084 ORTHO05D007449 2.4e-21 105.5 85 60.0
Cpa.g.c30698.2 Carica papaya HOM05D006084 ORTHO05D007449 3.1e-21 105.1 74 67.6
Os10g0395500 Oryza sativa ssp. japonica HOM05D006084 ORTHO05D007449 9.1e-21 103.6 74 66.2
FAN05G5625 Fragaria x ananassa HOM05D006084 ORTHO05D007449 1.2e-20 103.2 71 70.4
arahy.Tifrunner.gnm1.ann1.GQ5XJ3 Arachis hypogaea HOM05D006084 ORTHO05D007449 2.0e-20 102.4 73 69.9
SHI16396 Sapria himalayana HOM05D006084 ORTHO05D007449 2.0e-20 102.4 73 64.4
CARHR198600 Cardamine hirsuta HOM05D006084 ORTHO05D007449 2.6e-20 102.1 74 70.3
Oeu004718.1 Olea europaea HOM05D006084 ORTHO05D007449 2.6e-20 102.1 69 75.4
BcaB01g05101 Brassica carinata HOM05D006084 ORTHO05D007449 4.5e-20 101.3 74 67.6
BcaC03g13452 Brassica carinata HOM05D006084 ORTHO05D007449 4.5e-20 101.3 74 68.9
A02p02680 Brassica napus HOM05D006084 ORTHO05D007449 4.5e-20 101.3 74 68.9
A03p06720 Brassica napus HOM05D006084 ORTHO05D007449 4.5e-20 101.3 74 68.9
C02p07250 Brassica napus HOM05D006084 ORTHO05D007449 4.5e-20 101.3 74 68.9
C03p07740 Brassica napus HOM05D006084 ORTHO05D007449 4.5e-20 101.3 74 67.6
BolC2t06657H Brassica oleracea HOM05D006084 ORTHO05D007449 4.5e-20 101.3 74 68.9
BolC3t13274H Brassica oleracea HOM05D006084 ORTHO05D007449 4.5e-20 101.3 74 67.6
BraA02t05237Z Brassica rapa HOM05D006084 ORTHO05D007449 4.5e-20 101.3 74 68.9
Zm00001eb048120 Zea mays HOM05D006084 ORTHO05D007449 5.9e-20 100.9 74 66.2
Carub.0006s1288 Capsella rubella HOM05D006084 ORTHO05D007449 7.7e-20 100.5 74 67.6
AL6G25480 Arabidopsis lyrata HOM05D006084 ORTHO05D007449 1.0e-19 100.1 74 68.9
AT5G14710 Arabidopsis thaliana HOM05D006084 ORTHO05D007449 1.0e-19 100.1 74 68.9
BcaNung03101 Brassica carinata HOM05D006084 ORTHO05D007449 1.0e-19 100.1 74 67.6
Thhalv10015025m.g Eutrema salsugineum HOM05D006084 ORTHO05D007449 1.0e-19 100.1 74 67.6
Sp6g29330 Schrenkiella parvula HOM05D006084 ORTHO05D007449 1.0e-19 100.1 74 67.6
BraA03t10005Z Brassica rapa HOM05D006084 ORTHO05D007449 2.9e-19 98.6 74 67.6
Pp3c26_1260 Physcomitrium patens HOM05D006084 ORTHO05D007449 2.9e-19 98.6 88 54.5
THA.LOC104821076 Tarenaya hassleriana HOM05D006084 ORTHO05D007449 3.8e-19 98.2 74 66.2
SGA_v2.0_scaffold2848G54225 Striga asiatica HOM05D006084 ORTHO05D007449 6.5e-19 97.4 72 69.4
Aa31LG11G14750 Aethionema arabicum HOM05D006084 ORTHO05D007449 8.5e-19 97.1 77 62.3
ClCG09G019010 Citrullus lanatus HOM05D006084 ORTHO05D007449 1.1e-18 96.7 107 48.6
DCAR_011237 Daucus carota HOM05D006084 ORTHO05D007449 3.2e-18 95.1 57 78.9
MBI19_g17406_MAGBIO Magnolia biondii HOM05D006084 ORTHO05D007449 3.2e-18 95.1 59 78.0
MELO3C033557.2 Cucumis melo HOM05D006084 ORTHO05D007449 7.2e-18 94.0 95 52.6
ClCG00G003490 Citrullus lanatus HOM05D006084 ORTHO05D007449 2.7e-17 92.0 105 47.6
BcaC04g19017 Brassica carinata HOM05D006084 ORTHO05D007449 3.6e-17 91.7 67 68.7
Mapoly0005s0179 Marchantia polymorpha HOM05D006084 ORTHO05D007449 4.7e-17 91.3 74 60.8
MBI19_g07248_MAGBIO Magnolia biondii HOM05D006084 ORTHO05D007449 1.0e-16 90.1 61 75.4
Gorai.001G262800 Gossypium raimondii HOM05D006084 ORTHO05D007449 2.6e-15 85.5 60 68.3
SMO367G0706 Selaginella moellendorffii HOM05D006084 ORTHO05D007449 2.8e-14 82.0 62 66.1
C09p62430 Brassica napus HOM05D006084 ORTHO05D007449 3.7e-14 81.6 56 69.6
BolC9t59081H Brassica oleracea HOM05D006084 ORTHO05D007449 3.1e-13 78.6 56 67.9
CBR_g5628 Chara braunii HOM05D006084 ORTHO05D007449 3.8e-11 71.6 79 48.1
Ciclev10017692m.g Citrus clementina HOM05D006084 ORTHO05D007449 6.1e-09 64.3 37 75.7
Duzib264G1216 Durio zibethinus HOM05D006084 ORTHO05D007449 3.0e-08 62.0 38 73.7
Cre13.g571000 Chlamydomonas reinhardtii HOM05D006084 ORTHO05D007449 7.5e-07 57.4 63 41.3


User provided reference genes

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