Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0006280g0090 Nicotiana tabacum HOM05D003887 ORTHO05D048295 3.9e-27 124.0 60 100.0
Oeu020172.1 Olea europaea HOM05D003887 ORTHO05D004523 8.6e-11 69.7 43 76.7
Nitab4.5_0008674g0010 Nicotiana tabacum HOM05D003887 ORTHO05D004523 2.8e-09 64.7 39 76.9
Solyc10g079830.3 Solanum lycopersicum HOM05D003887 ORTHO05D004523 4.7e-09 63.9 38 78.9
CAN.G1656.10 Capsicum annuum HOM05D003887 ORTHO05D004523 6.2e-09 63.5 38 76.3
Sopen10g030440 Solanum pennellii HOM05D003887 ORTHO05D004523 1.1e-08 62.8 38 78.9
Gohir.D04G154300 Gossypium hirsutum HOM05D003887 ORTHO05D004523 1.4e-08 62.4 41 68.3
PGSC0003DMG400029847 Solanum tuberosum HOM05D003887 ORTHO05D004523 1.8e-08 62.0 38 78.9
Gohir.A04G113000 Gossypium hirsutum HOM05D003887 ORTHO05D004523 4.0e-08 60.8 41 63.4
Gorai.012G141600 Gossypium raimondii HOM05D003887 ORTHO05D004523 4.0e-08 60.8 41 65.9
Haze_20135 Corylus avellana HOM05D003887 ORTHO05D004523 5.2e-08 60.5 38 71.1
HanXRQChr02g0053341 Helianthus annuus HOM05D003887 ORTHO05D048295 5.2e-08 60.5 52 59.6
TAR633G0863 Trochodendron aralioides HOM05D003887 ORTHO05D004523 6.8e-08 60.1 38 68.4
Nn1g06263 Nelumbo nucifera HOM05D003887 ORTHO05D004523 1.2e-07 59.3 36 75.0
Cpa.g.sc104.4 Carica papaya HOM05D003887 ORTHO05D004523 1.5e-07 58.9 38 76.3
QL07p027116 Quercus lobata HOM05D003887 ORTHO05D004523 1.5e-07 58.9 37 67.6
GSVIVG01028462001 Vitis vinifera HOM05D003887 ORTHO05D004523 1.5e-07 58.9 36 69.4
COL.COLO4_29521 Corchorus olitorius HOM05D003887 ORTHO05D004523 2.0e-07 58.5 38 68.4
Cc06_g20890 Coffea canephora HOM05D003887 ORTHO05D004523 2.6e-07 58.2 35 74.3
QL02p078458 Quercus lobata HOM05D003887 ORTHO05D004523 2.6e-07 58.2 37 70.3
QL10p000363 Quercus lobata HOM05D003887 ORTHO05D004523 2.6e-07 58.2 37 70.3
CiPaw.09G022700 Carya illinoinensis HOM05D003887 ORTHO05D004523 3.4e-07 57.8 35 71.4
Gohir.A01G135300 Gossypium hirsutum HOM05D003887 ORTHO05D004523 3.4e-07 57.8 41 63.4
TWI18G1123 Tripterygium wilfordii HOM05D003887 ORTHO05D004523 3.4e-07 57.8 38 65.8
Cc06_g06820 Coffea canephora HOM05D003887 ORTHO05D004523 4.4e-07 57.4 35 74.3
Peaxi162Scf00130g01133 Petunia axillaris HOM05D003887 ORTHO05D004523 4.4e-07 57.4 36 75.0
TAR265G0002 Trochodendron aralioides HOM05D003887 ORTHO05D004523 4.4e-07 57.4 38 68.4
Atru.chr8.1305 Acer truncatum HOM05D003887 ORTHO05D004523 7.6e-07 56.6 38 65.8
ECA233G2913 Erigeron canadensis HOM05D003887 ORTHO05D004523 7.6e-07 56.6 40 62.5
Gohir.D01G122500 Gossypium hirsutum HOM05D003887 ORTHO05D004523 7.6e-07 56.6 41 61.0
Gorai.002G153400 Gossypium raimondii HOM05D003887 ORTHO05D004523 7.6e-07 56.6 41 61.0
Hma1.2p1_0969F.1_g242620 Hydrangea macrophylla HOM05D003887 ORTHO05D004523 7.6e-07 56.6 38 68.4
PSO339G2059 Papaver somniferum HOM05D003887 ORTHO05D004523 7.6e-07 56.6 35 65.7
Thecc.05G108100 Theobroma cacao HOM05D003887 ORTHO05D004523 7.6e-07 56.6 38 63.2
Ciclev10013089m.g Citrus clementina HOM05D003887 ORTHO05D004523 9.9e-07 56.2 34 67.6
Duzib128G1521 Durio zibethinus HOM05D003887 ORTHO05D004523 9.9e-07 56.2 38 65.8
CAN.G1237.27 Capsicum annuum HOM05D003887 ORTHO05D004523 1.3e-06 55.8 31 83.9
MD14G1042300 Malus domestica HOM05D003887 ORTHO05D004523 1.3e-06 55.8 39 61.5
Aqoxy2G02430 Aquilegia oxysepala HOM05D003887 ORTHO05D004523 1.7e-06 55.5 34 79.4
HanXRQChr13g0398651 Helianthus annuus HOM05D003887 ORTHO05D004523 1.7e-06 55.5 40 60.0
Aqoxy1G00605 Aquilegia oxysepala HOM05D003887 ORTHO05D004523 2.2e-06 55.1 34 76.5
arahy.Tifrunner.gnm1.ann1.97GEQU Arachis hypogaea HOM05D003887 ORTHO05D004523 2.2e-06 55.1 40 65.0
Duzib106G1345 Durio zibethinus HOM05D003887 ORTHO05D004523 2.2e-06 55.1 38 63.2
PSO513G0097 Papaver somniferum HOM05D003887 ORTHO05D004523 2.2e-06 55.1 35 65.7
Os09g0560500 Oryza sativa ssp. japonica HOM05D003887 ORTHO05D004523 2.9e-06 54.7 31 77.4
Prupe.7G091600 Prunus persica HOM05D003887 ORTHO05D004523 2.9e-06 54.7 43 58.1
MBI07_g23221_MAGBIO Magnolia biondii HOM05D003887 ORTHO05D004523 3.7e-06 54.3 37 62.2
Potri.016G067200 Populus trichocarpa HOM05D003887 ORTHO05D004523 3.7e-06 54.3 43 55.8
RcHm_v2.0_Chr3g0476591 Rosa chinensis HOM05D003887 ORTHO05D004523 3.7e-06 54.3 43 55.8
arahy.Tifrunner.gnm1.ann1.3PGZ0K Arachis hypogaea HOM05D003887 ORTHO05D004523 4.9e-06 53.9 36 66.7
MSTRG.10420 Avicennia marina HOM05D003887 ORTHO05D004523 4.9e-06 53.9 38 71.1
Sc06g0010620 Simmondsia chinensis HOM05D003887 ORTHO05D004523 4.9e-06 53.9 38 68.4
EL10Ac7g16270 Beta vulgaris HOM05D003887 ORTHO05D004523 6.4e-06 53.5 38 65.8
Migut.L01853 Erythranthe guttata HOM05D003887 ORTHO05D004523 6.4e-06 53.5 31 83.9
HanXRQChr01g0028311 Helianthus annuus HOM05D003887 ORTHO05D004523 6.4e-06 53.5 40 57.5
Ah.08g222240 Amaranthus hybridus HOM05D003887 ORTHO05D004523 8.4e-06 53.1 36 66.7
CANSAT64G2672 Cannabis sativa HOM05D003887 ORTHO05D004523 8.4e-06 53.1 35 62.9


User provided reference genes

Program Settings