Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0006280g0070 Nicotiana tabacum HOM05D011473 ORTHO05D011015 5.5e-44 181.0 125 100.0
Nitab4.5_0005373g0010 Nicotiana tabacum HOM05D011473 ORTHO05D011015 5.8e-25 117.9 115 84.3
CAN.G1226.10 Capsicum annuum HOM05D011473 ORTHO05D011015 8.3e-24 114.0 120 59.2
PGSC0003DMG400005154 Solanum tuberosum HOM05D011473 ORTHO05D011015 6.6e-21 104.4 124 62.9
Peaxi162Scf00417g00122 Petunia axillaris HOM05D011473 ORTHO05D011015 1.9e-20 102.8 105 70.5
Sopen04g033910 Solanum pennellii HOM05D011473 ORTHO05D011015 2.9e-16 89.0 70 75.7
Cc10_g02900 Coffea canephora HOM05D011473 ORTHO05D011015 2.3e-10 69.3 135 57.8
HanXRQChr05g0151951 Helianthus annuus HOM05D011473 ORTHO05D011015 2.3e-10 69.3 123 43.9
ECA246G4374 Erigeron canadensis HOM05D011473 ORTHO05D011015 4.0e-10 68.6 56 71.4
Lsat_1_v5_gn_4_119461 Lactuca sativa HOM05D011473 ORTHO05D011015 7.5e-09 64.3 113 45.1
Actinidia22547 Actinidia chinensis HOM05D011473 ORTHO05D011015 1.1e-07 60.5 114 60.5
Cfa018150 Carpinus fangiana HOM05D010348 ORTHO05D011015 1.1e-07 60.5 115 59.1
Gohir.D05G197300 Gossypium hirsutum HOM05D010348 ORTHO05D011015 1.9e-07 59.7 67 56.7
TAR381G0152 Trochodendron aralioides HOM05D010348 ORTHO05D011015 4.1e-07 58.5 118 49.2
Rhsim06G0033800 Rhododendron simsii HOM05D011473 ORTHO05D011015 7.1e-07 57.8 122 44.3
Solyc04g080310.1 Solanum lycopersicum HOM05D011473 ORTHO05D011015 9.2e-07 57.4 96 60.4
Sabra02G0198500 Salix brachista HOM05D010348 ORTHO05D011015 1.6e-06 56.6 61 60.7
Sabra14G0145000 Salix brachista HOM05D010348 ORTHO05D011015 2.1e-06 56.2 124 43.5
Gohir.A05G194100 Gossypium hirsutum HOM05D010348 ORTHO05D011015 2.7e-06 55.8 74 52.7
COL.COLO4_26318 Corchorus olitorius HOM05D010348 ORTHO05D011015 3.5e-06 55.5 116 50.9
Hma1.2p1_0203F.1_g086370 Hydrangea macrophylla HOM05D011473 ORTHO05D011015 4.6e-06 55.1 68 55.9
Manes.18G033530 Manihot esculenta HOM05D010348 ORTHO05D011015 4.6e-06 55.1 56 60.7
MSTRG.25171 Avicennia marina HOM05D011473 ORTHO05D087903 6.0e-06 54.7 50 64.0
Potri.002G260800 Populus trichocarpa HOM05D010348 ORTHO05D011015 7.8e-06 54.3 50 64.0


User provided reference genes

Program Settings