Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0006280g0060 Nicotiana tabacum HOM05D006598 ORTHO05D008132 6.3e-188 660.6 330 100.0
Nitab4.5_0010510g0030 Nicotiana tabacum HOM05D006598 ORTHO05D008132 1.9e-184 649.0 330 97.9
PGSC0003DMG400003679 Solanum tuberosum HOM05D006598 ORTHO05D008132 1.4e-171 606.3 333 90.4
CAN.G1226.16 Capsicum annuum HOM05D006598 ORTHO05D008132 2.0e-170 602.4 333 89.2
Solyc04g080380.3 Solanum lycopersicum HOM05D006598 ORTHO05D008132 3.8e-169 598.2 333 90.1
Sopen04g033970 Solanum pennellii HOM05D006598 ORTHO05D008132 6.5e-169 597.4 333 89.8
Dinv36084 Davidia involucrata HOM05D006598 ORTHO05D008132 4.0e-142 508.4 335 74.3
CSS0023084 Camellia sinensis var. sinensis HOM05D006598 ORTHO05D008132 7.5e-141 504.2 336 74.7
Dinv39426 Davidia involucrata HOM05D006598 ORTHO05D008132 1.9e-139 499.6 336 75.3
Atru.chr13.478 Acer truncatum HOM05D006598 ORTHO05D008132 1.3e-137 493.4 337 73.0
Actinidia15332 Actinidia chinensis HOM05D006598 ORTHO05D008132 5.1e-137 491.5 335 72.5
CSS0013932 Camellia sinensis var. sinensis HOM05D006598 ORTHO05D008132 2.8e-135 485.7 326 74.2
Cc10_g02850 Coffea canephora HOM05D006598 ORTHO05D008132 2.8e-135 485.7 337 73.9
GSVIVG01009711001 Vitis vinifera HOM05D006598 ORTHO05D008132 4.7e-135 485.0 331 71.9
Actinidia38007 Actinidia chinensis HOM05D006598 ORTHO05D008132 1.1e-134 483.8 331 72.5
TAR625G1490 Trochodendron aralioides HOM05D006598 ORTHO05D008132 3.1e-134 482.3 331 72.2
Prupe.1G379200 Prunus persica HOM05D006598 ORTHO05D008132 4.0e-134 481.9 336 71.4
vmacro21641 Vaccinium macrocarpon HOM05D006598 ORTHO05D008132 6.8e-134 481.1 330 71.2
Rhsim07G0239600 Rhododendron simsii HOM05D006598 ORTHO05D008132 1.2e-133 480.3 323 72.8
Manes.18G026900 Manihot esculenta HOM05D006598 ORTHO05D008132 9.9e-133 477.2 334 70.7
COL.COLO4_26313 Corchorus olitorius HOM05D006598 ORTHO05D008132 2.2e-132 476.1 333 70.0
Cfa018154 Carpinus fangiana HOM05D006598 ORTHO05D008132 3.7e-132 475.3 327 71.9
FvH4_2g39790 Fragaria vesca HOM05D006598 ORTHO05D008132 4.9e-132 474.9 336 69.3
Duzib116G0116 Durio zibethinus HOM05D006598 ORTHO05D008132 8.3e-132 474.2 331 71.0
FAN15G1256 Fragaria x ananassa HOM05D006598 ORTHO05D008132 8.3e-132 474.2 336 69.3
Lj4A39T66 Lonicera japonica HOM05D006598 ORTHO05D008132 8.3e-132 474.2 327 73.4
vmacro04528 Vaccinium macrocarpon HOM05D006598 ORTHO05D008132 1.1e-131 473.8 323 72.4
CiPaw.15G078300 Carya illinoinensis HOM05D006598 ORTHO05D008132 2.4e-131 472.6 337 70.9
QL02p008626 Quercus lobata HOM05D006598 ORTHO05D008132 2.4e-131 472.6 338 70.7
FAN20G2142 Fragaria x ananassa HOM05D006598 ORTHO05D008132 4.1e-131 471.9 336 69.0
Migut.C00732 Erythranthe guttata HOM05D006598 ORTHO05D008132 9.2e-131 470.7 336 70.2
Potri.002G260300 Populus trichocarpa HOM05D006598 ORTHO05D008132 9.2e-131 470.7 331 71.6
FAN27G1472 Fragaria x ananassa HOM05D006598 ORTHO05D008132 1.2e-130 470.3 336 68.5
Haze_17965 Corylus avellana HOM05D006598 ORTHO05D008132 2.7e-130 469.2 322 71.7
MSTRG.25174 Avicennia marina HOM05D006598 ORTHO05D008132 6.0e-130 468.0 331 71.9
SalBow7G0748 Salvia bowleyana HOM05D006598 ORTHO05D008132 1.3e-129 466.8 326 71.5
Rhsim06G0033600 Rhododendron simsii HOM05D006598 ORTHO05D008132 2.3e-129 466.1 331 69.5
Glyma.04G032000 Glycine max HOM05D006598 ORTHO05D008132 3.0e-129 465.7 322 70.5
Medtr3g111840 Medicago truncatula HOM05D006598 ORTHO05D008132 5.1e-129 464.9 323 69.7
ECA232G3558 Erigeron canadensis HOM05D006598 ORTHO05D008132 1.1e-128 463.8 332 68.7
Sabra02G0198100 Salix brachista HOM05D006598 ORTHO05D008132 2.5e-128 462.6 331 70.4
TPR.G12344 Trifolium pratense HOM05D006598 ORTHO05D008132 3.3e-128 462.2 323 68.7
Glyma.06G032100 Glycine max HOM05D006598 ORTHO05D008132 1.6e-127 459.9 313 71.9
Ca_15516_v3 Cicer arietinum L. HOM05D006598 ORTHO05D008132 4.7e-127 458.4 322 68.3
Lsat_1_v5_gn_4_119301 Lactuca sativa HOM05D006598 ORTHO05D008132 6.2e-127 458.0 325 69.2
Aqoxy6G01111 Aquilegia oxysepala HOM05D006598 ORTHO05D008132 8.1e-127 457.6 335 67.2
arahy.Tifrunner.gnm1.ann1.9Y7K4V Arachis hypogaea HOM05D006598 ORTHO05D008132 1.8e-126 456.4 309 70.9
Eucgr.F01894 Eucalyptus grandis HOM05D006598 ORTHO05D008132 1.8e-126 456.4 332 68.1
PGR031G2630 Punica granatum HOM05D006598 ORTHO05D008132 4.0e-126 455.3 329 69.3
Cpa.g.sc36.79 Carica papaya HOM05D006598 ORTHO05D008132 8.9e-126 454.1 333 69.4
Nitab4.5_0005730g0030 Nicotiana tabacum HOM05D006598 ORTHO05D008132 1.2e-125 453.8 330 71.8
Phvul.009G057800 Phaseolus vulgaris HOM05D006598 ORTHO05D008132 2.6e-125 452.6 322 68.9
PSO541G3348 Papaver somniferum HOM05D006598 ORTHO05D008132 3.4e-125 452.2 336 66.4
Ciclev10001322m.g Citrus clementina HOM05D006598 ORTHO05D008132 5.8e-125 451.4 336 67.9
arahy.Tifrunner.gnm1.ann1.KF7WGB Arachis hypogaea HOM05D006598 ORTHO05D008132 7.6e-125 451.1 309 69.9
Lj1g0003551 Lotus japonicus HOM05D006598 ORTHO05D008132 7.6e-125 451.1 327 67.6
TWI36G0987 Tripterygium wilfordii HOM05D006598 ORTHO05D008132 9.9e-125 450.7 337 67.4
Psat5g017160 Pisum sativum HOM05D006598 ORTHO05D008132 6.4e-124 448.0 324 67.6
MBI16_g31005_MAGBIO Magnolia biondii HOM05D006598 ORTHO05D008132 8.4e-124 447.6 317 67.8
Sed0027447 Sechium edule HOM05D006598 ORTHO05D008132 8.4e-124 447.6 324 67.6
CANSAT25G2965 Cannabis sativa HOM05D006598 ORTHO05D008132 7.1e-123 444.5 322 67.1
VMungo1309G1899 Vigna mungo HOM05D006598 ORTHO05D008132 7.1e-123 444.5 331 67.1
PSO675G7094 Papaver somniferum HOM05D006598 ORTHO05D008132 9.2e-123 444.1 331 65.6
Sc02g0006160 Simmondsia chinensis HOM05D006598 ORTHO05D008132 6.0e-122 441.4 313 68.4
THA.LOC104806941 Tarenaya hassleriana HOM05D006598 ORTHO05D008132 1.5e-120 436.8 306 68.0
TAR628G1208 Trochodendron aralioides HOM05D006598 ORTHO05D008132 1.9e-120 436.4 309 69.3
BcaC02g10811 Brassica carinata HOM05D006598 ORTHO05D008132 3.6e-119 432.2 314 65.3
C04p24910 Brassica napus HOM05D006598 ORTHO05D008132 3.6e-119 432.2 314 65.3
BolC4t23991H Brassica oleracea HOM05D006598 ORTHO05D008132 3.6e-119 432.2 314 65.3
Thhalv10003240m.g Eutrema salsugineum HOM05D006598 ORTHO05D008132 4.8e-119 431.8 314 65.6
BcaC06g31749 Brassica carinata HOM05D006598 ORTHO05D008132 3.1e-118 429.1 314 65.0
A06p48250 Brassica napus HOM05D006598 ORTHO05D008132 5.3e-118 428.3 314 64.6
BraA06t27693Z Brassica rapa HOM05D006598 ORTHO05D008132 5.3e-118 428.3 314 64.6
Carub.0008s0618 Capsella rubella HOM05D006598 ORTHO05D008132 1.2e-117 427.2 320 63.8
CARHR181720 Cardamine hirsuta HOM05D006598 ORTHO05D008132 1.2e-117 427.2 314 64.3
Thecc.08G027000 Theobroma cacao HOM05D006598 ORTHO05D008132 1.5e-117 426.8 332 67.2
Aa31LG9G12810 Aethionema arabicum HOM05D006598 ORTHO05D008132 3.4e-117 425.6 314 65.0
Sp2g07390 Schrenkiella parvula HOM05D006598 ORTHO05D008132 7.6e-117 424.5 319 63.0
AL8G18360 Arabidopsis lyrata HOM05D006598 ORTHO05D008132 2.9e-116 422.5 319 62.4
SGA_v2.0_scaffold54G19518 Striga asiatica HOM05D006598 ORTHO05D008132 8.4e-116 421.0 327 63.6
Lalb_Chr11g0062331 Lupinus albus HOM05D006598 ORTHO05D008132 2.7e-114 416.0 331 64.4
Hund26575 Selenicereus undatus HOM05D006598 ORTHO05D008132 2.7e-114 416.0 310 64.2
CDE04G2166 Ceratophyllum demersum HOM05D006598 ORTHO05D008132 3.9e-113 412.1 329 61.4
AT5G42760 Arabidopsis thaliana HOM05D006598 ORTHO05D008132 8.7e-113 411.0 310 63.9
ATR0810G155 Amborella trichopoda HOM05D006598 ORTHO05D008132 1.5e-112 410.2 317 62.8
AUR62035446 Chenopodium quinoa HOM05D006598 ORTHO05D008132 1.9e-112 409.8 313 63.9
Ah.11g043150 Amaranthus hybridus HOM05D006598 ORTHO05D008132 5.6e-112 408.3 331 60.4
HPP92_018806 Vanilla planifolia HOM05D006598 ORTHO05D008132 9.6e-112 407.5 314 62.4
Oeu049953.1 Olea europaea HOM05D006598 ORTHO05D008132 5.4e-107 391.7 335 62.4
Os03g0775000 Oryza sativa ssp. japonica HOM05D006598 ORTHO05D008132 1.4e-99 367.1 306 59.2
Zm00001eb059150 Zea mays HOM05D006598 ORTHO05D008132 6.7e-97 358.2 312 57.7
CDE06G0448 Ceratophyllum demersum HOM05D006598 ORTHO05D008132 6.1e-90 335.1 288 58.7
SEGI_39292 Sequoiadendron giganteum HOM05D006598 ORTHO05D008132 1.3e-89 334.0 308 55.5
Nitab4.5_0001091g0120 Nicotiana tabacum HOM05D006598 ORTHO05D008132 2.3e-89 333.2 201 81.6
TAR381G1379 Trochodendron aralioides HOM05D006598 ORTHO05D008132 2.0e-85 320.1 203 75.9
AagrBONN_evm.TU.Sc2ySwM_228.3129 Anthoceros agrestis HOM05D006598 ORTHO05D008132 6.5e-84 315.1 325 50.8
Pp3c8_2950 Physcomitrium patens HOM05D006598 ORTHO05D008132 2.4e-78 296.6 304 50.7
Pp3c4_6590 Physcomitrium patens HOM05D006598 ORTHO05D008132 2.9e-76 289.7 305 49.8
HPP92_018704 Vanilla planifolia HOM05D006598 ORTHO05D008132 3.3e-72 276.2 238 57.6
HanXRQChr16g0508491 Helianthus annuus HOM05D006598 ORTHO05D008132 2.0e-69 266.9 199 64.3
Nn5g29606 Nelumbo nucifera HOM05D006598 ORTHO05D008132 2.6e-69 266.5 215 61.4
CSS0023478 Camellia sinensis var. sinensis HOM05D006598 ORTHO05D008132 2.2e-68 263.5 162 81.5
unitig_46.g17936 Utricularia gibba HOM05D006598 ORTHO05D008132 3.1e-62 243.0 177 67.8
HPP92_018786 Vanilla planifolia HOM05D006598 ORTHO05D008132 1.6e-58 230.7 157 68.8
FAN20G3016 Fragaria x ananassa HOM05D006598 ORTHO05D008132 3.7e-55 219.5 132 80.3
Actinidia29823 Actinidia chinensis HOM05D006598 ORTHO05D008132 6.5e-52 208.8 154 68.2
Pp3c12_23400 Physcomitrium patens HOM05D006598 ORTHO05D008132 2.3e-49 200.3 281 43.4
AUR62039547 Chenopodium quinoa HOM05D006598 ORTHO05D008132 4.9e-47 192.6 193 53.4
HPP92_018785 Vanilla planifolia HOM05D006598 ORTHO05D008132 5.2e-41 172.6 133 60.9
Actinidia22543 Actinidia chinensis HOM05D006598 ORTHO05D008132 1.3e-39 167.9 144 60.4
TAR381G0844 Trochodendron aralioides HOM05D006598 ORTHO05D008132 1.3e-39 167.9 134 62.7
MD15G1027400 Malus domestica HOM05D006598 ORTHO05D008132 2.0e-37 160.6 91 81.3
CSS0032599 Camellia sinensis var. sinensis HOM05D006598 ORTHO05D008132 7.3e-27 125.6 126 53.2
Nitab4.5_0000457g0120 Nicotiana tabacum HOM05D006598 ORTHO05D008132 1.6e-21 107.8 72 76.4
Actinidia29824 Actinidia chinensis HOM05D006598 ORTHO05D008132 7.8e-21 105.5 107 51.4
MCO09G151 Micromonas commoda HOM05D006598 ORTHO05D008132 1.5e-16 91.3 204 34.3
HanXRQChr09g0268921 Helianthus annuus HOM05D006598 ORTHO05D008132 1.3e-15 88.2 247 27.9
CBR_g22328 Chara braunii HOM05D006598 ORTHO05D008132 6.6e-12 75.9 115 40.0
Cre17.g737650 Chlamydomonas reinhardtii HOM05D038115 ORTHO05D008132 1.2e-08 65.1 188 29.8
MCO05G745 Micromonas commoda HOM05D006598 ORTHO05D269324 4.4e-08 63.2 199 31.7


User provided reference genes

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