Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0006280g0040 Nicotiana tabacum HOM05D007221 ORTHO05D009204 1.1e-142 510.0 268 100.0
Nitab4.5_0010510g0010 Nicotiana tabacum HOM05D007221 ORTHO05D009204 2.3e-119 432.6 232 97.8
PGSC0003DMG400003731 Solanum tuberosum HOM05D007221 ORTHO05D009204 3.5e-104 382.1 228 88.2
Solyc04g080390.4 Solanum lycopersicum HOM05D007221 ORTHO05D009204 1.5e-94 350.1 234 82.1
Sopen04g033980 Solanum pennellii HOM05D007221 ORTHO05D009204 1.9e-94 349.7 230 83.0
CAN.G1226.17 Capsicum annuum HOM05D007221 ORTHO05D009204 2.9e-90 335.9 231 80.1
Peaxi162Scf00417g01337 Petunia axillaris HOM05D007221 ORTHO05D009204 1.3e-74 283.9 163 89.0
TAR625G0916 Trochodendron aralioides HOM05D007221 ORTHO05D009204 3.8e-66 255.8 239 61.9
Lj4A39T64 Lonicera japonica HOM05D007221 ORTHO05D009204 7.1e-65 251.5 240 58.3
PSO675G7833 Papaver somniferum HOM05D007221 ORTHO05D009204 9.3e-65 251.1 240 60.8
CiPaw.15G078400 Carya illinoinensis HOM05D007221 ORTHO05D009204 2.7e-64 249.6 224 62.1
Sabra14G0145300 Salix brachista HOM05D007221 ORTHO05D009204 2.7e-64 249.6 233 60.5
Potri.014G196800 Populus trichocarpa HOM05D007221 ORTHO05D009204 7.9e-64 248.1 218 64.2
SGA_v2.0_scaffold111G31495 Striga asiatica HOM05D007221 ORTHO05D009204 2.3e-63 246.5 232 58.6
Rhsim07G0239500 Rhododendron simsii HOM05D007221 ORTHO05D009204 3.9e-63 245.7 232 57.8
Cc10_g02840 Coffea canephora HOM05D007221 ORTHO05D009204 5.1e-63 245.4 238 58.8
Actinidia38006 Actinidia chinensis HOM05D007221 ORTHO05D009204 8.7e-63 244.6 229 62.0
Gohir.D01G104000 Gossypium hirsutum HOM05D007221 ORTHO05D009204 1.5e-62 243.8 249 58.6
Hma1.2p1_0203F.1_g086350 Hydrangea macrophylla HOM05D007221 ORTHO05D009204 2.5e-62 243.0 238 57.6
HanXRQChr16g0508501 Helianthus annuus HOM05D007221 ORTHO05D009204 3.3e-62 242.7 237 60.3
Gohir.A01G115700 Gossypium hirsutum HOM05D007221 ORTHO05D009204 4.3e-62 242.3 249 58.6
MD08G1031600 Malus domestica HOM05D007221 ORTHO05D009204 5.7e-62 241.9 238 60.1
CANSAT25G0501 Cannabis sativa HOM05D007221 ORTHO05D009204 7.4e-62 241.5 241 57.7
Migut.C00733 Erythranthe guttata HOM05D007221 ORTHO05D009204 9.7e-62 241.1 232 59.5
Gorai.002G127900 Gossypium raimondii HOM05D007221 ORTHO05D009204 2.2e-61 240.0 258 57.4
Ciclev10002305m.g Citrus clementina HOM05D007221 ORTHO05D009204 6.3e-61 238.4 242 57.9
QL02p008631 Quercus lobata HOM05D007221 ORTHO05D009204 6.3e-61 238.4 237 57.0
Psat5g017120 Pisum sativum HOM05D007221 ORTHO05D009204 1.4e-60 237.3 226 54.4
Prupe.1G379100 Prunus persica HOM05D007221 ORTHO05D009204 1.4e-60 237.3 231 58.4
GSVIVG01009712001 Vitis vinifera HOM05D007221 ORTHO05D009204 1.4e-60 237.3 202 63.4
TPR.G12470 Trifolium pratense HOM05D007221 ORTHO05D009204 3.1e-60 236.1 219 57.1
Dinv36085 Davidia involucrata HOM05D007221 ORTHO05D009204 6.9e-60 235.0 237 57.8
Ca_15515_v3 Cicer arietinum L. HOM05D007221 ORTHO05D009204 1.2e-59 234.2 228 55.7
Thecc.08G027100 Theobroma cacao HOM05D007221 ORTHO05D009204 1.2e-59 234.2 248 57.3
MD15G1027300 Malus domestica HOM05D007221 ORTHO05D009204 4.5e-59 232.3 238 57.6
arahy.Tifrunner.gnm1.ann1.50YYNM Arachis hypogaea HOM05D007221 ORTHO05D009204 1.0e-58 231.1 234 54.3
Aqoxy6G01112 Aquilegia oxysepala HOM05D007221 ORTHO05D009204 1.3e-58 230.7 222 56.3
THA.LOC104812558 Tarenaya hassleriana HOM05D007221 ORTHO05D009204 1.7e-58 230.3 230 55.7
arahy.Tifrunner.gnm1.ann1.647QNX Arachis hypogaea HOM05D007221 ORTHO05D009204 2.9e-58 229.6 234 54.3
Medtr3g111850 Medicago truncatula HOM05D007221 ORTHO05D009204 5.0e-58 228.8 228 53.1
VMungo1309G3139 Vigna mungo HOM05D007221 ORTHO05D009204 1.1e-57 227.6 227 55.1
Aa31LG9G12820 Aethionema arabicum HOM05D007221 ORTHO05D009204 1.4e-57 227.3 195 61.0
Lj1g0002842 Lotus japonicus HOM05D007221 ORTHO05D009204 2.5e-57 226.5 200 58.5
Sp2g07400 Schrenkiella parvula HOM05D007221 ORTHO05D009204 2.5e-57 226.5 209 58.9
COL.COLO4_26312 Corchorus olitorius HOM05D007221 ORTHO05D009204 3.2e-57 226.1 251 55.0
PGR031G1076 Punica granatum HOM05D007221 ORTHO05D009204 5.5e-57 225.3 242 55.0
Lalb_Chr11g0062321 Lupinus albus HOM05D007221 ORTHO05D009204 7.2e-57 224.9 226 53.5
RcHm_v2.0_Chr6g0301081 Rosa chinensis HOM05D007221 ORTHO05D009204 2.1e-56 223.4 241 53.5
AT5G42765 Arabidopsis thaliana HOM05D007221 ORTHO05D009204 3.6e-56 222.6 197 59.9
Eucgr.F01893 Eucalyptus grandis HOM05D007221 ORTHO05D009204 6.1e-56 221.9 243 53.5
FvH4_2g39780 Fragaria vesca HOM05D007221 ORTHO05D009204 7.9e-56 221.5 240 53.3
Oeu063754.1 Olea europaea HOM05D007221 ORTHO05D009204 7.9e-56 221.5 168 69.0
MELO3C010945.2 Cucumis melo HOM05D007221 ORTHO05D009204 1.0e-55 221.1 191 59.7
CsaV3_2G028730 Cucumis sativus L. HOM05D007221 ORTHO05D009204 1.8e-55 220.3 191 59.2
Sc02g0006170 Simmondsia chinensis HOM05D007221 ORTHO05D009204 1.8e-55 220.3 234 55.1
Carub.0008s0617 Capsella rubella HOM05D007221 ORTHO05D009204 2.3e-55 219.9 212 55.2
CARHR181710 Cardamine hirsuta HOM05D007221 ORTHO05D009204 3.0e-55 219.5 228 54.4
Glyma.04G031900 Glycine max HOM05D007221 ORTHO05D009204 3.9e-55 219.2 231 52.8
Phvul.009G057900 Phaseolus vulgaris HOM05D007221 ORTHO05D009204 8.8e-55 218.0 224 51.8
ECA232G4972 Erigeron canadensis HOM05D007221 ORTHO05D009204 1.5e-54 217.2 171 64.9
AL8G18350 Arabidopsis lyrata HOM05D007221 ORTHO05D009204 7.4e-54 214.9 226 53.5
BraA09t37604Z Brassica rapa HOM05D007221 ORTHO05D009204 7.4e-54 214.9 216 55.1
Sed0005529 Sechium edule HOM05D007221 ORTHO05D009204 1.3e-53 214.2 230 54.3
A09p19950 Brassica napus HOM05D007221 ORTHO05D009204 2.2e-53 213.4 216 55.1
BolC9t55425H Brassica oleracea HOM05D007221 ORTHO05D009204 2.2e-53 213.4 216 54.6
Thhalv10003376m.g Eutrema salsugineum HOM05D007221 ORTHO05D009204 2.2e-53 213.4 223 53.4
BcaC04g21975 Brassica carinata HOM05D007221 ORTHO05D009204 2.8e-53 213.0 217 54.4
MBI16_g31006_MAGBIO Magnolia biondii HOM05D007221 ORTHO05D009204 3.7e-53 212.6 211 56.4
Atru.chr13.477 Acer truncatum HOM05D007221 ORTHO05D009204 6.3e-53 211.8 210 58.6
BcaB07g31048 Brassica carinata HOM05D007221 ORTHO05D009204 1.4e-52 210.7 221 54.3
C09p25270 Brassica napus HOM05D007221 ORTHO05D009204 3.1e-52 209.5 216 54.2
SalBow7G4300 Salvia bowleyana HOM05D007221 ORTHO05D009204 6.9e-52 208.4 197 59.4
Lsat_1_v5_gn_4_119280 Lactuca sativa HOM05D007221 ORTHO05D009204 1.2e-51 207.6 238 54.2
AUR62039548 Chenopodium quinoa HOM05D007221 ORTHO05D009204 2.0e-51 206.8 224 52.2
vmacro04529 Vaccinium macrocarpon HOM05D007221 ORTHO05D009204 2.6e-51 206.5 299 45.8
ClCG08G015050 Citrullus lanatus HOM05D007221 ORTHO05D009204 7.7e-51 204.9 213 53.1
CSS0008817 Camellia sinensis var. sinensis HOM05D007221 ORTHO05D009204 2.2e-50 203.4 157 65.0
Nn1g04985 Nelumbo nucifera HOM05D007221 ORTHO05D009204 2.9e-50 203.0 214 56.5
AUR62035445 Chenopodium quinoa HOM05D007221 ORTHO05D009204 3.8e-50 202.6 215 53.5
Haze_17964 Corylus avellana HOM05D007221 ORTHO05D009204 5.0e-50 202.2 212 56.1
Manes.05G159500 Manihot esculenta HOM05D007221 ORTHO05D009204 2.3e-47 193.4 214 56.1
PSO541G5695 Papaver somniferum HOM05D007221 ORTHO05D009204 1.2e-43 181.0 187 58.3
HPP92_018787 Vanilla planifolia HOM05D007221 ORTHO05D009204 5.0e-42 175.6 184 53.8
Os03g0774400 Oryza sativa ssp. japonica HOM05D007221 ORTHO05D009204 1.1e-41 174.5 204 48.0
EL10Ac1g01796 Beta vulgaris HOM05D007221 ORTHO05D009204 4.2e-41 172.6 234 44.9
HPP92_018805 Vanilla planifolia HOM05D007221 ORTHO05D009204 1.2e-40 171.0 212 49.5
Zm00001eb059140 Zea mays HOM05D007221 ORTHO05D009204 1.0e-39 167.9 222 45.5
Hund26574 Selenicereus undatus HOM05D007221 ORTHO05D009204 1.4e-39 167.5 147 61.9
Pp3c15_4620 Physcomitrium patens HOM05D007221 ORTHO05D009204 6.7e-39 165.2 173 51.4
FAN27G1052 Fragaria x ananassa HOM05D007221 ORTHO05D009204 8.2e-37 158.3 227 44.9
Glyma.06G032000 Glycine max HOM05D007221 ORTHO05D009204 7.0e-36 155.2 124 60.5
Mapoly0024s0117 Marchantia polymorpha HOM05D007221 ORTHO05D009204 1.2e-35 154.5 190 48.4
FAN20G2979 Fragaria x ananassa HOM05D007221 ORTHO05D009204 5.9e-35 152.1 227 44.1
Ah.05g167430 Amaranthus hybridus HOM05D007221 ORTHO05D009204 1.1e-33 147.9 202 47.0
SMO356G0611 Selaginella moellendorffii HOM05D007221 ORTHO05D009204 1.4e-31 141.0 169 48.5
AagrBONN_evm.TU.Sc2ySwM_368.2172 Anthoceros agrestis HOM05D007221 ORTHO05D009204 6.8e-31 138.7 170 42.4
unitig_26.g9834 Utricularia gibba HOM05D007221 ORTHO05D009204 1.2e-30 137.9 100 70.0
HPP92_018706 Vanilla planifolia HOM05D007221 ORTHO05D009204 1.7e-29 134.0 134 53.7
FAN15G0707 Fragaria x ananassa HOM05D007221 ORTHO05D009204 2.5e-25 120.2 89 69.7
Duzib093G2110 Durio zibethinus HOM05D007221 ORTHO05D009204 2.1e-24 117.1 90 67.8
SEGI_36647 Sequoiadendron giganteum HOM05D007221 ORTHO05D009204 2.0e-22 110.5 133 48.9
Manes.18G026801 Manihot esculenta HOM05D007221 ORTHO05D009204 5.9e-19 99.0 109 52.3
CBR_g36819 Chara braunii HOM05D007221 ORTHO05D009204 1.0e-18 98.2 250 30.8
RcHm_v2.0_Chr1g0350071 Rosa chinensis HOM05D007221 ORTHO05D009204 1.7e-18 97.4 73 67.1
Aqoxy71s002 Aquilegia oxysepala HOM05D007221 ORTHO05D009204 1.1e-09 68.2 53 56.6
Dinv39425 Davidia involucrata HOM05D002064 ORTHO05D002118 4.3e-09 66.2 45 68.9
SGA_v2.0_scaffold54G19517 Striga asiatica HOM05D007221 ORTHO05D009204 8.0e-08 62.0 62 56.5


User provided reference genes

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