Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0006254g0010 Nicotiana tabacum HOM05D005357 ORTHO05D006354 3.7e-293 1010.7 498 100.0
Nitab4.5_0000008g0560 Nicotiana tabacum HOM05D005357 ORTHO05D006354 4.0e-271 937.6 498 93.0
Peaxi162Scf00141g00133 Petunia axillaris HOM05D005357 ORTHO05D006354 2.7e-267 924.9 499 91.2
CAN.G284.13 Capsicum annuum HOM05D005357 ORTHO05D006354 2.6e-246 855.1 503 84.7
PGSC0003DMG402020324 Solanum tuberosum HOM05D005357 ORTHO05D006354 2.1e-187 659.4 500 69.6
Cc06_g01760 Coffea canephora HOM05D005357 ORTHO05D006354 1.6e-182 643.3 502 66.7
CiPaw.09G205000 Carya illinoinensis HOM05D005357 ORTHO05D006354 1.4e-178 630.2 507 65.7
QL07p036221 Quercus lobata HOM05D005357 ORTHO05D006354 1.5e-177 626.7 507 65.9
Sopen09g006960 Solanum pennellii HOM05D005357 ORTHO05D006354 9.8e-177 624.0 500 67.6
Cfa017262 Carpinus fangiana HOM05D005357 ORTHO05D006354 1.3e-173 613.6 504 64.5
Dinv37091 Davidia involucrata HOM05D005357 ORTHO05D006354 6.2e-171 604.7 503 65.4
PGSC0003DMG400002411 Solanum tuberosum HOM05D005357 ORTHO05D006354 3.1e-170 602.4 385 79.0
Duzib093G0024 Durio zibethinus HOM05D005357 ORTHO05D006354 4.0e-170 602.1 503 63.8
Haze_20938 Corylus avellana HOM05D005357 ORTHO05D006354 7.6e-169 597.8 502 63.5
Thecc.05G023500 Theobroma cacao HOM05D005357 ORTHO05D006354 2.4e-167 592.8 507 62.7
Actinidia29139 Actinidia chinensis HOM05D005357 ORTHO05D006354 7.1e-167 591.3 507 61.5
Hma1.2p1_0703F.1_g206335 Hydrangea macrophylla HOM05D005357 ORTHO05D006354 3.9e-165 585.5 505 63.6
Actinidia13789 Actinidia chinensis HOM05D005357 ORTHO05D006354 1.5e-164 583.6 508 61.0
COL.COLO4_14619 Corchorus olitorius HOM05D005357 ORTHO05D006354 1.2e-163 580.5 503 62.4
Potri.006G095600 Populus trichocarpa HOM05D005357 ORTHO05D006354 8.4e-160 567.8 512 60.9
Duzib106G1773 Durio zibethinus HOM05D005357 ORTHO05D006354 5.4e-159 565.1 503 61.0
Manes.08G086900 Manihot esculenta HOM05D005357 ORTHO05D006354 3.5e-158 562.4 504 61.9
TWI77G0073 Tripterygium wilfordii HOM05D005357 ORTHO05D006354 5.1e-157 558.5 498 58.8
Ciclev10011563m.g Citrus clementina HOM05D005357 ORTHO05D006354 8.7e-157 557.8 505 61.2
Gohir.A09G163000 Gossypium hirsutum HOM05D005357 ORTHO05D006354 1.5e-156 557.0 503 60.4
Duzib128G1243 Durio zibethinus HOM05D005357 ORTHO05D006354 1.9e-156 556.6 502 60.0
TAR633G0560 Trochodendron aralioides HOM05D005357 ORTHO05D006354 9.6e-156 554.3 524 59.9
Gohir.D09G158500 Gossypium hirsutum HOM05D005357 ORTHO05D006354 5.8e-153 545.0 503 59.2
CANSAT35G1827 Cannabis sativa HOM05D005357 ORTHO05D006354 6.4e-152 541.6 504 59.5
MSTRG.5603 Avicennia marina HOM05D005357 ORTHO05D006354 3.2e-151 539.3 501 60.3
Prupe.6G269500 Prunus persica HOM05D005357 ORTHO05D006354 1.2e-150 537.3 487 61.2
Gorai.006G180200 Gossypium raimondii HOM05D005357 ORTHO05D006354 9.6e-148 527.7 503 58.3
TAR636G3085 Trochodendron aralioides HOM05D005357 ORTHO05D006354 1.1e-146 524.2 492 61.0
RcHm_v2.0_Chr3g0463991 Rosa chinensis HOM05D005357 ORTHO05D006354 3.1e-146 522.7 489 61.1
MD04G1145200 Malus domestica HOM05D005357 ORTHO05D006354 9.0e-146 521.2 461 61.0
Lj2A78G31 Lonicera japonica HOM05D005357 ORTHO05D006354 2.6e-145 519.6 504 61.1
Nn1g02852 Nelumbo nucifera HOM05D005357 ORTHO05D006354 4.5e-145 518.8 522 58.2
MD12G1159000 Malus domestica HOM05D005357 ORTHO05D006354 3.8e-144 515.8 484 58.5
Cpa.g.sc312.3 Carica papaya HOM05D005357 ORTHO05D006354 4.2e-143 512.3 501 56.7
FvH4_6g12190 Fragaria vesca HOM05D005357 ORTHO05D006354 7.1e-143 511.5 488 59.6
FAN09G0023 Fragaria x ananassa HOM05D005357 ORTHO05D006354 7.1e-143 511.5 488 59.6
FAN14G1666 Fragaria x ananassa HOM05D005357 ORTHO05D006354 7.1e-143 511.5 488 59.6
FAN14G2781 Fragaria x ananassa HOM05D005357 ORTHO05D006354 3.5e-142 509.2 488 59.4
ClCG10G021740 Citrullus lanatus HOM05D005357 ORTHO05D006354 2.3e-141 506.5 507 57.2
SalBow3G4061 Salvia bowleyana HOM05D005357 ORTHO05D006354 3.3e-140 502.7 501 58.5
FAN05G3392 Fragaria x ananassa HOM05D005357 ORTHO05D006354 7.4e-140 501.5 488 59.2
TWI74G0304 Tripterygium wilfordii HOM05D005357 ORTHO05D006354 8.1e-139 498.0 446 59.6
FAN02G3235 Fragaria x ananassa HOM05D005357 ORTHO05D006354 1.8e-138 496.9 473 60.0
CsaV3_3G034230 Cucumis sativus L. HOM05D005357 ORTHO05D006354 4.5e-137 492.3 507 55.8
Eucgr.B02762 Eucalyptus grandis HOM05D005357 ORTHO05D006354 1.7e-136 490.3 513 54.6
Migut.J00234 Erythranthe guttata HOM05D005357 ORTHO05D006354 2.5e-135 486.5 500 56.8
Sabra06G0073400 Salix brachista HOM05D005357 ORTHO05D006354 3.2e-135 486.1 608 48.7
MBI06_g17209_MAGBIO Magnolia biondii HOM05D005357 ORTHO05D006354 4.6e-134 482.3 527 55.8
Sed0007832 Sechium edule HOM05D005357 ORTHO05D006354 9.0e-130 468.0 425 60.2
MELO3C009198.2 Cucumis melo HOM05D005357 ORTHO05D006354 2.7e-126 456.4 507 53.5
arahy.Tifrunner.gnm1.ann1.H8VZ0K Arachis hypogaea HOM05D005357 ORTHO05D006354 6.1e-126 455.3 497 53.9
Aqoxy1G00739 Aquilegia oxysepala HOM05D005357 ORTHO05D006354 1.8e-125 453.8 499 53.1
Solyc09g013120.4 Solanum lycopersicum HOM05D005357 ORTHO05D006354 2.3e-125 453.4 397 64.2
vmacro01296 Vaccinium macrocarpon HOM05D005357 ORTHO05D006354 2.3e-125 453.4 508 52.2
Oeu030537.4 Olea europaea HOM05D005357 ORTHO05D006354 3.0e-125 453.0 477 54.5
PSO384G3148 Papaver somniferum HOM05D005357 ORTHO05D006354 8.7e-125 451.4 497 52.9
PGR031G1436 Punica granatum HOM05D005357 ORTHO05D006354 1.6e-123 447.2 544 51.1
Glyma.07G144300 Glycine max HOM05D005357 ORTHO05D006354 2.8e-123 446.4 501 51.9
arahy.Tifrunner.gnm1.ann1.5ZZ6F4 Arachis hypogaea HOM05D005357 ORTHO05D006354 3.7e-123 446.0 516 52.1
Phvul.008G108800 Phaseolus vulgaris HOM05D005357 ORTHO05D006354 1.4e-122 444.1 501 52.7
PSO585G0030 Papaver somniferum HOM05D005357 ORTHO05D006354 5.3e-122 442.2 497 52.5
Glyma.18G195500 Glycine max HOM05D005357 ORTHO05D006354 6.9e-122 441.8 502 52.0
SGA_v2.0_scaffold85G26772 Striga asiatica HOM05D005357 ORTHO05D006354 5.9e-121 438.7 490 54.5
Gohir.A04G087700 Gossypium hirsutum HOM05D005357 ORTHO05D006354 1.3e-120 437.6 375 61.9
Dinv03649 Davidia involucrata HOM05D005357 ORTHO05D006354 8.5e-120 434.9 418 59.3
Gorai.012G111100 Gossypium raimondii HOM05D005357 ORTHO05D006354 1.9e-119 433.7 376 61.4
EL10As5g23477 Beta vulgaris HOM05D005357 ORTHO05D006354 2.5e-119 433.3 505 52.1
Medtr7g056183 Medicago truncatula HOM05D005357 ORTHO05D006354 4.2e-119 432.6 497 51.3
Medtr7g066710 Medicago truncatula HOM05D005357 ORTHO05D006354 9.4e-119 431.4 499 50.9
AUR62024704 Chenopodium quinoa HOM05D005357 ORTHO05D006354 5.1e-117 425.6 385 62.3
AUR62011861 Chenopodium quinoa HOM05D005357 ORTHO05D006354 8.8e-117 424.9 385 62.1
Ca_09168_v3 Cicer arietinum L. HOM05D005357 ORTHO05D006354 2.0e-116 423.7 497 50.7
DCAR_005589 Daucus carota HOM05D005357 ORTHO05D006354 2.5e-116 423.3 510 51.0
Lj3g0024478 Lotus japonicus HOM05D005357 ORTHO05D006354 2.5e-116 423.3 503 52.5
GSVIVG01034021001 Vitis vinifera HOM05D005357 ORTHO05D006354 2.2e-112 410.2 502 48.8
Lalb_Chr01g0022881 Lupinus albus HOM05D005357 ORTHO05D006354 5.0e-112 409.1 502 50.2
TPR.G1557 Trifolium pratense HOM05D005357 ORTHO05D006354 1.9e-111 407.1 387 57.9
Ah.11g049570 Amaranthus hybridus HOM05D005357 ORTHO05D006354 5.5e-111 405.6 505 50.7
Gohir.D04G128100 Gossypium hirsutum HOM05D005357 ORTHO05D006354 9.4e-111 404.8 376 58.8
CSS0020158 Camellia sinensis var. sinensis HOM05D005357 ORTHO05D006354 8.8e-109 398.3 390 58.2
Oeu044369.1 Olea europaea HOM05D005357 ORTHO05D006354 8.2e-107 391.7 544 45.6
Lalb_Chr03g0042941 Lupinus albus HOM05D005357 ORTHO05D006354 1.3e-104 384.4 502 48.4
Hund09607 Selenicereus undatus HOM05D005357 ORTHO05D006354 2.7e-102 376.7 407 55.3
Hund02920 Selenicereus undatus HOM05D005357 ORTHO05D006354 2.2e-99 367.1 384 54.7
HPP92_021066 Vanilla planifolia HOM05D005357 ORTHO05D006354 2.4e-98 363.6 522 45.4
THA.LOC104827038 Tarenaya hassleriana HOM05D005357 ORTHO05D006354 2.2e-96 357.1 430 51.6
Atru.chr8.2135 Acer truncatum HOM05D005357 ORTHO05D006354 5.0e-96 355.9 389 54.8
SGA_v2.0_scaffold75G24995 Striga asiatica HOM05D005357 ORTHO05D006354 2.5e-95 353.6 480 47.5
Aa31LG1G22800 Aethionema arabicum HOM05D005357 ORTHO05D006354 1.5e-92 344.4 502 45.0
HanXRQChr13g0406371 Helianthus annuus HOM05D005357 ORTHO05D006354 9.8e-92 341.7 501 43.9
CDE04G3126 Ceratophyllum demersum HOM05D005357 ORTHO05D006354 1.4e-90 337.8 467 47.5
Sp6g40520 Schrenkiella parvula HOM05D005357 ORTHO05D006354 5.4e-90 335.9 382 52.6
unitig_22.g6590 Utricularia gibba HOM05D005357 ORTHO05D006354 2.9e-88 330.1 504 43.8
Thhalv10014073m.g Eutrema salsugineum HOM05D005357 ORTHO05D006354 1.1e-87 328.2 380 51.8
Carub.0006s0073 Capsella rubella HOM05D005357 ORTHO05D006354 5.5e-87 325.9 379 51.2
Sc05g0000650 Simmondsia chinensis HOM05D005357 ORTHO05D006354 2.0e-84 317.4 325 56.3
AL6G11040 Arabidopsis lyrata HOM05D005357 ORTHO05D006354 2.8e-83 313.5 381 49.3
AT5G01160 Arabidopsis thaliana HOM05D005357 ORTHO05D006354 2.8e-83 313.5 381 50.1
CARHR211480 Cardamine hirsuta HOM05D005357 ORTHO05D006354 8.3e-83 312.0 380 50.0
Os10g0494500 Oryza sativa ssp. japonica HOM05D005357 ORTHO05D006354 2.0e-81 307.4 424 45.3
Zm00001eb044800 Zea mays HOM05D005357 ORTHO05D006354 2.7e-81 307.0 499 43.9
BcaB05g21942 Brassica carinata HOM05D005357 ORTHO05D006354 1.0e-80 305.1 392 48.5
BcaNung02762 Brassica carinata HOM05D005357 ORTHO05D006354 5.0e-80 302.8 387 48.8
A10p33610 Brassica napus HOM05D005357 ORTHO05D006354 2.5e-79 300.4 386 48.4
BolC9t60186H Brassica oleracea HOM05D005357 ORTHO05D006354 3.3e-79 300.1 395 47.1
Psat3g131000 Pisum sativum HOM05D005357 ORTHO05D006354 1.2e-78 298.1 417 47.0
C09p74540 Brassica napus HOM05D005357 ORTHO05D006354 1.6e-78 297.7 395 46.8
CDE03G0086 Ceratophyllum demersum HOM05D005357 ORTHO05D006354 1.2e-76 291.6 459 43.8
BraA10t45393Z Brassica rapa HOM05D005357 ORTHO05D006354 9.8e-76 288.5 500 40.8
ECA248G2096 Erigeron canadensis HOM05D005357 ORTHO05D006354 3.2e-74 283.5 255 62.0
BcaNung02766 Brassica carinata HOM05D005357 ORTHO05D006354 7.0e-74 282.3 401 46.1
Lsat_1_v5_gn_5_155380 Lactuca sativa HOM05D005357 ORTHO05D006354 1.5e-71 274.6 501 41.5
HanXRQChr13g0397571 Helianthus annuus HOM05D005357 ORTHO05D006354 5.8e-68 262.7 483 38.7
VMungo1383G1762 Vigna mungo HOM05D005357 ORTHO05D006354 1.3e-67 261.5 383 44.6
HanXRQChr13g0397921 Helianthus annuus HOM05D005357 ORTHO05D006354 1.7e-64 251.1 244 53.7
Zm00001eb221140 Zea mays HOM05D005357 ORTHO05D006354 5.2e-61 239.6 295 49.5
Oeu055280.1 Olea europaea HOM05D005357 ORTHO05D006354 1.9e-55 221.1 265 50.6
SHI12776 Sapria himalayana HOM05D005357 ORTHO05D006354 1.1e-53 215.3 350 46.9
SEGI_31043 Sequoiadendron giganteum HOM05D005357 ORTHO05D006354 2.3e-53 214.2 161 64.0
DCAR_008325 Daucus carota HOM05D005357 ORTHO05D006354 4.6e-49 199.9 245 47.3
ATR0605G041 Amborella trichopoda HOM05D005357 ORTHO05D006354 5.4e-42 176.4 415 36.9
Atru.chr8.2134 Acer truncatum HOM05D005357 ORTHO05D006354 1.1e-39 168.7 108 75.9
Hma1.2p1_0125F.1_g058510 Hydrangea macrophylla HOM05D005357 ORTHO05D006354 1.1e-39 168.7 386 35.8
Rhsim01G0256700 Rhododendron simsii HOM05D005357 ORTHO05D004574 7.1e-34 149.4 161 49.7
Mapoly0068s0057 Marchantia polymorpha HOM05D005357 ORTHO05D006354 6.7e-32 142.9 257 36.6
PGSC0003DMG401020324 Solanum tuberosum HOM05D005357 ORTHO05D006354 2.1e-30 137.9 84 79.8
Pp3c20_10060 Physcomitrium patens HOM05D005357 ORTHO05D006354 2.8e-30 137.5 267 34.5
Pp3c23_4130 Physcomitrium patens HOM05D005357 ORTHO05D006354 1.8e-29 134.8 251 33.9
Sopen01g013720 Solanum pennellii HOM05D005357 ORTHO05D006354 9.9e-28 129.0 112 63.4
Pp3c8_18230 Physcomitrium patens HOM05D005357 ORTHO05D006354 5.5e-26 123.2 234 34.2
Glyma.18G195800 Glycine max HOM05D005357 ORTHO05D006354 7.1e-26 122.9 253 36.0
SEGI_08495 Sequoiadendron giganteum HOM05D054687 ORTHO05D006354 2.1e-25 121.3 368 32.1
CBR_g24154 Chara braunii HOM05D005357 ORTHO05D006354 2.3e-24 117.9 106 48.1
Sopen01g013770 Solanum pennellii HOM05D005357 ORTHO05D006354 3.3e-23 114.0 258 34.1
CSS0030830 Camellia sinensis var. sinensis HOM05D005357 ORTHO05D006354 1.4e-18 98.6 68 75.0
Oeu020881.1 Olea europaea HOM05D005357 ORTHO05D006354 1.5e-12 78.6 80 57.5
RcHm_v2.0_Chr3g0492291 Rosa chinensis HOM05D005357 ORTHO05D006354 1.6e-06 58.5 52 65.4


User provided reference genes

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