Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0006244g0030 Nicotiana tabacum HOM05D005907 ORTHO05D007033 3.0e-93 345.1 172 100.0
Nitab4.5_0000986g0090 Nicotiana tabacum HOM05D005907 ORTHO05D007033 3.5e-81 305.1 183 86.9
CAN.G998.7 Capsicum annuum HOM05D005907 ORTHO05D007033 4.7e-62 241.5 185 71.9
Sopen08g023890 Solanum pennellii HOM05D005907 ORTHO05D007033 8.4e-59 230.7 186 66.1
Solyc08g075290.2 Solanum lycopersicum HOM05D005907 ORTHO05D007033 1.9e-55 219.5 176 66.5
Peaxi162Scf00876g00429 Petunia axillaris HOM05D005907 ORTHO05D007033 3.8e-43 178.7 176 56.8
Cc08_g05990 Coffea canephora HOM05D005907 ORTHO05D007033 2.4e-37 159.5 186 46.2
CSS0017808 Camellia sinensis var. sinensis HOM05D005907 ORTHO05D007033 4.5e-36 155.2 161 54.7
Actinidia01244 Actinidia chinensis HOM05D005907 ORTHO05D007033 7.6e-36 154.5 178 49.4
MSTRG.25750 Avicennia marina HOM05D005907 ORTHO05D007033 1.4e-34 150.2 176 44.9
vmacro00100 Vaccinium macrocarpon HOM05D005907 ORTHO05D007033 4.2e-34 148.7 163 48.5
Rhsim11G0037900 Rhododendron simsii HOM05D005907 ORTHO05D007033 7.1e-34 147.9 164 48.8
Migut.A00472 Erythranthe guttata HOM05D005907 ORTHO05D007033 9.3e-34 147.5 167 50.3
Ciclev10012886m.g Citrus clementina HOM05D005907 ORTHO05D007033 1.2e-33 147.1 161 50.9
GSVIVG01036890001 Vitis vinifera HOM05D005907 ORTHO05D007033 1.2e-33 147.1 173 45.7
Cfa012308 Carpinus fangiana HOM05D005907 ORTHO05D007033 2.1e-33 146.4 159 49.7
Peaxi162Scf00550g00429 Petunia axillaris HOM05D005907 ORTHO05D007033 2.7e-33 146.0 109 73.4
Lj3A1053G42 Lonicera japonica HOM05D005907 ORTHO05D007033 3.5e-33 145.6 176 51.1
CiPaw.11G074000 Carya illinoinensis HOM05D005907 ORTHO05D007033 7.9e-33 144.4 160 53.8
Oeu047809.2 Olea europaea HOM05D005907 ORTHO05D007033 7.9e-33 144.4 171 51.5
Sed0007709 Sechium edule HOM05D005907 ORTHO05D007033 3.0e-32 142.5 178 43.8
TAR636G1547 Trochodendron aralioides HOM05D005907 ORTHO05D007033 6.7e-32 141.4 145 51.7
Atru.chr8.2614 Acer truncatum HOM05D005907 ORTHO05D007033 1.1e-31 140.6 169 48.5
TWI60G0533 Tripterygium wilfordii HOM05D005907 ORTHO05D007033 1.5e-31 140.2 173 45.1
Prupe.5G013600 Prunus persica HOM05D005907 ORTHO05D007033 9.7e-31 137.5 184 42.9
SalBow4G0438 Salvia bowleyana HOM05D005907 ORTHO05D007033 9.7e-31 137.5 160 48.8
Oeu046770.1 Olea europaea HOM05D005907 ORTHO05D007033 1.3e-30 137.1 148 52.0
PGR031G0343 Punica granatum HOM05D005907 ORTHO05D007033 1.3e-30 137.1 146 50.7
FAN08G1334 Fragaria x ananassa HOM05D005907 ORTHO05D007033 2.2e-30 136.3 177 46.9
RcHm_v2.0_Chr7g0215261 Rosa chinensis HOM05D005907 ORTHO05D007033 4.8e-30 135.2 163 48.5
Eucgr.E01152 Eucalyptus grandis HOM05D005907 ORTHO05D007033 1.1e-29 134.0 162 42.6
FAN04G3107 Fragaria x ananassa HOM05D005907 ORTHO05D007033 2.4e-29 132.9 177 46.3
FvH4_5g24980 Fragaria vesca HOM05D005907 ORTHO05D007033 3.1e-29 132.5 177 46.3
FAN18G3850 Fragaria x ananassa HOM05D005907 ORTHO05D007033 3.1e-29 132.5 177 46.3
ClCG07G011130 Citrullus lanatus HOM05D005907 ORTHO05D007033 5.3e-29 131.7 164 45.1
SalBow8G0159 Salvia bowleyana HOM05D005907 ORTHO05D007033 5.3e-29 131.7 155 48.4
Gorai.004G176900 Gossypium raimondii HOM05D005907 ORTHO05D007033 6.9e-29 131.3 136 44.9
TAR629G0350 Trochodendron aralioides HOM05D005907 ORTHO05D007033 6.9e-29 131.3 145 49.7
Duzib205G2043 Durio zibethinus HOM05D005907 ORTHO05D007033 2.0e-28 129.8 145 45.5
COL.COLO4_16745 Corchorus olitorius HOM05D005907 ORTHO05D007033 3.4e-28 129.0 159 43.4
CsaV3_4G007120 Cucumis sativus L. HOM05D005907 ORTHO05D007033 5.9e-28 128.3 164 43.3
Gohir.A08G148600 Gossypium hirsutum HOM05D005907 ORTHO05D007033 1.3e-27 127.1 136 44.9
Psat2g145040 Pisum sativum HOM05D005907 ORTHO05D007033 1.3e-27 127.1 172 44.8
THA.LOC104814387 Tarenaya hassleriana HOM05D005907 ORTHO05D007033 1.3e-27 127.1 165 43.0
TPR.G8986 Trifolium pratense HOM05D005907 ORTHO05D007033 1.3e-27 127.1 161 46.6
CANSAT35G1964 Cannabis sativa HOM05D005907 ORTHO05D007033 1.7e-27 126.7 164 43.9
Hund14310 Selenicereus undatus HOM05D005907 ORTHO05D007033 2.2e-27 126.3 157 43.3
Nn1g09337 Nelumbo nucifera HOM05D005907 ORTHO05D007033 3.8e-27 125.6 156 44.2
Potri.004G235000 Populus trichocarpa HOM05D005907 ORTHO05D007033 3.8e-27 125.6 185 40.5
MD06G1011300 Malus domestica HOM05D005907 ORTHO05D007033 5.0e-27 125.2 187 39.6
Medtr5g025640 Medicago truncatula HOM05D005907 ORTHO05D007033 5.0e-27 125.2 145 48.3
Duzib068G0478 Durio zibethinus HOM05D005907 ORTHO05D007033 6.5e-27 124.8 147 45.6
Lalb_Chr16g0380441 Lupinus albus HOM05D005907 ORTHO05D007033 6.5e-27 124.8 160 45.6
Thecc.03G320600 Theobroma cacao HOM05D005907 ORTHO05D007033 6.5e-27 124.8 146 45.9
Lj2g0019236 Lotus japonicus HOM05D005907 ORTHO05D007033 8.5e-27 124.4 164 46.3
Manes.17G003749 Manihot esculenta HOM05D005907 ORTHO05D007033 8.5e-27 124.4 169 42.0
arahy.Tifrunner.gnm1.ann1.4G5U2W Arachis hypogaea HOM05D005907 ORTHO05D007033 1.1e-26 124.0 171 43.9
arahy.Tifrunner.gnm1.ann1.Y9HS7A Arachis hypogaea HOM05D005907 ORTHO05D007033 1.1e-26 124.0 171 43.9
Gohir.D08G169700 Gossypium hirsutum HOM05D005907 ORTHO05D007033 1.1e-26 124.0 152 40.8
Nn3g19120 Nelumbo nucifera HOM05D005907 ORTHO05D007033 1.4e-26 123.6 157 44.6
Glyma.01G153000 Glycine max HOM05D005907 ORTHO05D007033 5.5e-26 121.7 169 39.6
Gohir.A12G201000 Gossypium hirsutum HOM05D005907 ORTHO05D007033 7.2e-26 121.3 146 42.5
Glyma.16G076400 Glycine max HOM05D005907 ORTHO05D007033 9.3e-26 120.9 174 43.1
Lalb_Chr05g0215181 Lupinus albus HOM05D005907 ORTHO05D007033 9.3e-26 120.9 163 44.8
AL1G45790 Arabidopsis lyrata HOM05D005907 ORTHO05D007033 1.6e-25 120.2 164 39.0
Glyma.09G218300 Glycine max HOM05D005907 ORTHO05D007033 1.6e-25 120.2 169 38.5
Lalb_Chr09g0325061 Lupinus albus HOM05D005907 ORTHO05D007033 1.6e-25 120.2 154 42.9
CARHR031020 Cardamine hirsuta HOM05D005907 ORTHO05D007033 2.7e-25 119.4 159 36.5
PSO339G2078 Papaver somniferum HOM05D005907 ORTHO05D007033 3.6e-25 119.0 157 43.3
Gorai.008G218600 Gossypium raimondii HOM05D005907 ORTHO05D007033 6.1e-25 118.2 149 42.3
PGR042G1103 Punica granatum HOM05D005907 ORTHO05D007033 7.9e-25 117.9 155 45.2
Aa31LG2G14390 Aethionema arabicum HOM05D005907 ORTHO05D007033 1.0e-24 117.5 150 42.0
HanXRQChr08g0233691 Helianthus annuus HOM05D005907 ORTHO05D007033 1.3e-24 117.1 156 43.6
Gohir.D12G203800 Gossypium hirsutum HOM05D005907 ORTHO05D007033 1.8e-24 116.7 149 41.6
unitig_37.g12906 Utricularia gibba HOM05D005907 ORTHO05D007033 1.8e-24 116.7 149 46.3
Sed0019955 Sechium edule HOM05D005907 ORTHO05D007033 3.9e-24 115.5 145 38.6
A08p10440 Brassica napus HOM05D005907 ORTHO05D007033 5.1e-24 115.2 161 38.5
Carub.0001s3002 Capsella rubella HOM05D005907 ORTHO05D007033 8.7e-24 114.4 145 40.7
Sp4g03880 Schrenkiella parvula HOM05D005907 ORTHO05D007033 8.7e-24 114.4 174 37.9
VMungo1215G2629 Vigna mungo HOM05D001324 ORTHO05D001220 8.7e-24 114.4 145 45.5
Thhalv10008873m.g Eutrema salsugineum HOM05D005907 ORTHO05D007033 1.1e-23 114.0 161 37.9
Phvul.002G122500 Phaseolus vulgaris HOM05D005907 ORTHO05D007033 1.9e-23 113.2 145 44.8
Medtr8g072220 Medicago truncatula HOM05D005907 ORTHO05D007033 3.3e-23 112.5 166 44.6
Sp1g27370 Schrenkiella parvula HOM05D005907 ORTHO05D007033 3.3e-23 112.5 147 40.8
BcaB04g18131 Brassica carinata HOM05D005907 ORTHO05D007033 4.3e-23 112.1 147 38.8
ECA233G3754 Erigeron canadensis HOM05D005907 ORTHO05D007033 5.7e-23 111.7 146 45.9
Manes.15G184500 Manihot esculenta HOM05D005907 ORTHO05D007033 9.7e-23 110.9 147 43.5
SGA_v2.0_scaffold121G33056 Striga asiatica HOM05D005907 ORTHO05D007033 1.3e-22 110.5 153 43.1
ATR0568G210 Amborella trichopoda HOM05D005907 ORTHO05D007033 1.7e-22 110.2 146 43.8
BcaNung01784 Brassica carinata HOM05D005907 ORTHO05D007033 2.2e-22 109.8 162 40.1
BcaC07g37737 Brassica carinata HOM05D005907 ORTHO05D007033 2.8e-22 109.4 161 36.0
BolC8t48118H Brassica oleracea HOM05D005907 ORTHO05D007033 2.8e-22 109.4 161 36.0
Thhalv10026210m.g Eutrema salsugineum HOM05D005907 ORTHO05D007033 2.8e-22 109.4 170 37.6
BraA08t33042Z Brassica rapa HOM05D005907 ORTHO05D007033 3.7e-22 109.0 168 36.9
PGSC0003DMG400001952 Solanum tuberosum HOM05D005907 ORTHO05D007033 4.8e-22 108.6 68 73.5
AT4G19370 Arabidopsis thaliana HOM05D005907 ORTHO05D007033 6.3e-22 108.2 167 38.3
Sp7g17980 Schrenkiella parvula HOM05D005907 ORTHO05D007033 1.1e-21 107.5 168 36.9
BcaC09g51418 Brassica carinata HOM05D005907 ORTHO05D007033 1.4e-21 107.1 170 38.2
C01p13330 Brassica napus HOM05D005907 ORTHO05D007033 1.4e-21 107.1 170 38.2
BolC1t01308H Brassica oleracea HOM05D005907 ORTHO05D007033 1.4e-21 107.1 170 38.2
A01p11320 Brassica napus HOM05D005907 ORTHO05D007033 3.1e-21 105.9 170 37.6
BraA01t01076Z Brassica rapa HOM05D005907 ORTHO05D007033 3.1e-21 105.9 170 37.6
CDE01G0013 Ceratophyllum demersum HOM05D005907 ORTHO05D007033 4.1e-21 105.5 150 38.0
Carub.0007s2186 Capsella rubella HOM05D005907 ORTHO05D007033 5.3e-21 105.1 169 36.7
Aa31LG6G1970 Aethionema arabicum HOM05D005907 ORTHO05D007033 2.6e-20 102.8 174 37.4
THA.LOC104806200 Tarenaya hassleriana HOM05D005907 ORTHO05D007033 2.6e-20 102.8 161 37.9
AL7G34790 Arabidopsis lyrata HOM05D005907 ORTHO05D007033 3.4e-20 102.4 166 37.3
AT1G31720 Arabidopsis thaliana HOM05D005907 ORTHO05D007033 2.2e-19 99.8 138 38.4
CARHR226160 Cardamine hirsuta HOM05D005907 ORTHO05D007033 2.2e-19 99.8 167 37.1
Dinv37434 Davidia involucrata HOM05D005907 ORTHO05D007033 2.9e-19 99.4 118 50.0
Nitab4.5_0009213g0030 Nicotiana tabacum HOM05D005907 ORTHO05D007033 3.8e-19 99.0 162 39.5
Sc07g0008040 Simmondsia chinensis HOM05D005907 ORTHO05D007033 2.5e-18 96.3 118 42.4
Phvul.003G278300 Phaseolus vulgaris HOM05D005907 ORTHO05D007033 7.2e-18 94.7 126 45.2
VMungo0251G3198 Vigna mungo HOM05D005907 ORTHO05D007033 3.6e-17 92.4 153 39.2
Haze_08421 Corylus avellana HOM05D005907 ORTHO05D007033 4.7e-17 92.0 105 47.6
EL10Ac5g12591 Beta vulgaris HOM05D005907 ORTHO05D007033 5.1e-16 88.6 165 35.2
Cpa.g.c30909 Carica papaya HOM05D005907 ORTHO05D007033 1.5e-15 87.0 130 41.5
ClCG11G016120 Citrullus lanatus HOM05D005907 ORTHO05D007033 3.7e-14 82.4 101 43.6
Nitab4.5_0000943g0070 Nicotiana tabacum HOM05D005907 ORTHO05D007033 8.2e-14 81.3 165 36.4
Os02g0703300 Oryza sativa ssp. japonica HOM05D005907 ORTHO05D007033 2.0e-12 76.6 131 32.8
Zm00001eb251950 Zea mays HOM05D005907 ORTHO05D007033 2.0e-12 76.6 128 35.2
Aqoxy2G03476 Aquilegia oxysepala HOM05D005907 ORTHO05D007033 3.8e-11 72.4 95 42.1
Sed0021253 Sechium edule HOM05D005907 ORTHO05D007033 3.2e-10 69.3 103 34.0
Haze_08422 Corylus avellana HOM05D005907 ORTHO05D007033 5.5e-10 68.6 45 66.7
SEGI_15207 Sequoiadendron giganteum HOM05D002819 ORTHO05D003207 7.2e-10 68.2 143 30.1
Psat4g109120 Pisum sativum HOM05D005907 ORTHO05D007033 9.4e-10 67.8 105 40.0
MELO3C016217.2 Cucumis melo HOM05D005907 ORTHO05D007033 6.1e-09 65.1 69 50.7
arahy.Tifrunner.gnm1.ann1.UI3LS8 Arachis hypogaea HOM05D005907 ORTHO05D007033 2.3e-08 63.2 67 50.7
SEGI_02785 Sequoiadendron giganteum HOM05D002819 ORTHO05D003207 2.3e-08 63.2 138 34.1
arahy.Tifrunner.gnm1.ann1.VB8HUC Arachis hypogaea HOM05D005907 ORTHO05D007033 6.7e-08 61.6 67 49.3
Lsat_1_v5_gn_6_17141 Lactuca sativa HOM05D005907 ORTHO05D007033 3.3e-07 59.3 51 60.8


User provided reference genes

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