Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0006234g0030 Nicotiana tabacum HOM05D005506 ORTHO05D004172 8.2e-41 169.9 80 100.0
Nitab4.5_0000204g0100 Nicotiana tabacum HOM05D005506 ORTHO05D004172 1.3e-30 136.0 91 75.8
Sopen09g013570 Solanum pennellii HOM05D000017 ORTHO05D004172 6.1e-12 73.9 87 41.4
PGSC0003DMG400038069 Solanum tuberosum HOM05D000017 ORTHO05D004172 6.1e-12 73.9 88 42.0
PGSC0003DMG400009624 Solanum tuberosum HOM05D000017 ORTHO05D000013 1.0e-11 73.2 89 42.7
PGSC0003DMG401009023 Solanum tuberosum HOM05D000017 ORTHO05D000013 2.3e-11 72.0 89 41.6
Nitab4.5_0001063g0060 Nicotiana tabacum HOM05D005506 ORTHO05D004172 9.7e-10 66.6 65 55.4
CAN.G159.11 Capsicum annuum HOM05D005506 ORTHO05D004172 1.3e-09 66.2 52 55.8
Nitab4.5_0000071g0340 Nicotiana tabacum HOM05D010082 ORTHO05D004172 3.7e-09 64.7 40 75.0
CAN.G520.8 Capsicum annuum HOM05D005506 ORTHO05D004172 4.8e-09 64.3 54 53.7
CAN.G1308.1 Capsicum annuum HOM05D005506 ORTHO05D004172 1.1e-08 63.2 54 55.6
PGSC0003DMG400036799 Solanum tuberosum HOM05D005506 ORTHO05D004172 1.1e-08 63.2 93 37.6
CAN.G129.2 Capsicum annuum HOM05D005506 ORTHO05D004172 1.4e-08 62.8 54 51.9
Sopen11g018400 Solanum pennellii HOM05D000004 ORTHO05D000002 1.8e-08 62.4 89 34.8
CAN.G1612.5 Capsicum annuum HOM05D005506 ORTHO05D004172 2.4e-08 62.0 93 36.6
CAN.G153.9 Capsicum annuum HOM05D005506 ORTHO05D004172 1.6e-07 59.3 66 42.4
CAN.G989.1 Capsicum annuum HOM05D005506 ORTHO05D004172 2.7e-07 58.5 93 36.6
CAN.G156.11 Capsicum annuum HOM05D005506 ORTHO05D004172 4.5e-07 57.8 54 46.3
CAN.G170.72 Capsicum annuum HOM05D000327 ORTHO05D000218 4.5e-07 57.8 93 35.5
CAN.G1235.4 Capsicum annuum HOM05D000638 ORTHO05D000801 7.7e-07 57.0 85 37.6
CAN.G78.32 Capsicum annuum HOM05D005506 ORTHO05D004172 1.0e-06 56.6 52 50.0
Sopen09g015940 Solanum pennellii HOM05D005506 ORTHO05D004172 1.3e-06 56.2 64 43.8
CAN.G861.45 Capsicum annuum HOM05D005506 ORTHO05D004172 1.7e-06 55.8 54 46.3
Nitab4.5_0003230g0080 Nicotiana tabacum HOM05D005506 ORTHO05D004172 1.7e-06 55.8 56 51.8
Sopen02g009890 Solanum pennellii HOM05D005506 ORTHO05D004172 1.7e-06 55.8 79 39.2
CAN.G66.2 Capsicum annuum HOM05D005506 ORTHO05D004172 2.2e-06 55.5 54 48.1
CAN.G1014.53 Capsicum annuum HOM05D000261 ORTHO05D004172 3.8e-06 54.7 52 50.0
CAN.G1127.3 Capsicum annuum HOM05D001217 ORTHO05D004172 5.0e-06 54.3 54 46.3
CAN.G248.41 Capsicum annuum HOM05D005506 ORTHO05D004172 5.0e-06 54.3 93 34.4
CAN.G1038.18 Capsicum annuum HOM05D005506 ORTHO05D004172 8.5e-06 53.5 80 36.2
CAN.G371.20 Capsicum annuum HOM05D005506 ORTHO05D004172 8.5e-06 53.5 93 33.3
CAN.G809.55 Capsicum annuum HOM05D005506 ORTHO05D004172 8.5e-06 53.5 50 52.0


User provided reference genes

Program Settings