Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0006232g0050 Nicotiana tabacum HOM05D002677 ORTHO05D002906 8.7e-38 159.8 82 100.0
Peaxi162Scf00038g02027 Petunia axillaris HOM05D002677 ORTHO05D002906 4.2e-16 87.8 78 67.9
Migut.I01096 Erythranthe guttata HOM05D002677 ORTHO05D002906 9.6e-13 76.6 68 58.8
Oeu057901.1 Olea europaea HOM05D002677 ORTHO05D002906 4.0e-11 71.2 72 61.1
Nitab4.5_0000189g0120 Nicotiana tabacum HOM05D002677 ORTHO05D002906 5.3e-11 70.9 70 60.0
Nitab4.5_0000255g0310 Nicotiana tabacum HOM05D002677 ORTHO05D002906 1.2e-10 69.7 86 51.2
Peaxi162Scf00207g01427 Petunia axillaris HOM05D002677 ORTHO05D002906 1.2e-10 69.7 75 57.3
Solyc12g049380.3 Solanum lycopersicum HOM05D002677 ORTHO05D002906 1.2e-10 69.7 69 58.0
SalBow6G4216 Salvia bowleyana HOM05D002677 ORTHO05D002906 1.5e-10 69.3 70 57.1
SalBow6G6250 Salvia bowleyana HOM05D002677 ORTHO05D002906 1.5e-10 69.3 70 57.1
Oeu043637.1 Olea europaea HOM05D002677 ORTHO05D002906 2.0e-10 68.9 72 58.3
C05p15820 Brassica napus HOM05D002677 ORTHO05D002906 2.6e-10 68.6 80 48.8
BolC5t30287H Brassica oleracea HOM05D002677 ORTHO05D002906 2.6e-10 68.6 80 48.8
Nitab4.5_0002716g0010 Nicotiana tabacum HOM05D002677 ORTHO05D002906 2.6e-10 68.6 75 54.7
AL1G29660 Arabidopsis lyrata HOM05D002677 ORTHO05D002906 5.8e-10 67.4 79 48.1
COL.COLO4_30726 Corchorus olitorius HOM05D002677 ORTHO05D002906 7.6e-10 67.0 79 53.2
Sopen12g023860 Solanum pennellii HOM05D002677 ORTHO05D002906 7.6e-10 67.0 69 56.5
arahy.Tifrunner.gnm1.ann1.0DE01N Arachis hypogaea HOM05D002677 ORTHO05D002906 1.3e-09 66.2 70 55.7
Glyma.19G263200 Glycine max HOM05D002677 ORTHO05D002906 1.3e-09 66.2 77 51.9
Potri.001G166700 Populus trichocarpa HOM05D002677 ORTHO05D002906 1.3e-09 66.2 77 48.1
CARHR017990 Cardamine hirsuta HOM05D002677 ORTHO05D002906 1.7e-09 65.9 79 46.8
BcaB03g13001 Brassica carinata HOM05D002677 ORTHO05D002906 2.2e-09 65.5 79 44.3
Carub.0001s1716 Capsella rubella HOM05D002677 ORTHO05D002906 2.2e-09 65.5 79 48.1
Ca_23401_v3 Cicer arietinum L. HOM05D002677 ORTHO05D002906 2.9e-09 65.1 79 51.9
Glyma.03G264200 Glycine max HOM05D002677 ORTHO05D002906 2.9e-09 65.1 68 54.4
Lj5C33T9 Lonicera japonica HOM05D002677 ORTHO05D002906 2.9e-09 65.1 79 57.0
Nitab4.5_0005192g0020 Nicotiana tabacum HOM05D002677 ORTHO05D002906 2.9e-09 65.1 69 53.6
PGR102G1333 Punica granatum HOM05D002677 ORTHO05D002906 2.9e-09 65.1 77 48.1
Atru.chr1.4046 Acer truncatum HOM05D002677 ORTHO05D002906 3.8e-09 64.7 84 52.4
AT1G17400 Arabidopsis thaliana HOM05D002677 ORTHO05D002906 3.8e-09 64.7 79 46.8
A06p13360 Brassica napus HOM05D002677 ORTHO05D002906 3.8e-09 64.7 79 48.1
BraA06t24488Z Brassica rapa HOM05D002677 ORTHO05D002906 3.8e-09 64.7 79 48.1
ECA247G1792 Erigeron canadensis HOM05D002677 ORTHO05D002906 3.8e-09 64.7 77 49.4
HanXRQChr04g0094501 Helianthus annuus HOM05D002677 ORTHO05D002906 6.5e-09 63.9 77 51.9
Rhsim08G0240600 Rhododendron simsii HOM05D002677 ORTHO05D002906 6.5e-09 63.9 70 48.6
Sabra01G0126600 Salix brachista HOM05D002677 ORTHO05D002906 6.5e-09 63.9 70 51.4
Sabra03G0040000 Salix brachista HOM05D002677 ORTHO05D002906 6.5e-09 63.9 81 44.4
Duzib235G0718 Durio zibethinus HOM05D002677 ORTHO05D002906 8.4e-09 63.5 80 48.8
Thhalv10009299m.g Eutrema salsugineum HOM05D002677 ORTHO05D002906 8.4e-09 63.5 79 48.1
MBI13_g00700_MAGBIO Magnolia biondii HOM05D002677 ORTHO05D002906 8.4e-09 63.5 68 55.9
SGA_v2.0_scaffold71G23889 Striga asiatica HOM05D002029 ORTHO05D002158 8.4e-09 63.5 72 51.4
Ciclev10027453m.g Citrus clementina HOM05D002677 ORTHO05D002906 1.1e-08 63.2 81 46.9
TWI14G0551 Tripterygium wilfordii HOM05D002677 ORTHO05D002906 1.1e-08 63.2 75 56.0
arahy.Tifrunner.gnm1.ann1.Z8YREE Arachis hypogaea HOM05D002677 ORTHO05D002906 1.4e-08 62.8 70 52.9
BcaC07g38854 Brassica carinata HOM05D002677 ORTHO05D002906 1.4e-08 62.8 84 45.2
C08p17920 Brassica napus HOM05D002677 ORTHO05D002906 1.4e-08 62.8 84 45.2
BolC8t49422H Brassica oleracea HOM05D002677 ORTHO05D002906 1.4e-08 62.8 84 45.2
Sp1g15540 Schrenkiella parvula HOM05D002677 ORTHO05D002906 1.4e-08 62.8 79 50.6
SpUn0033_0010 Schrenkiella parvula HOM05D002677 ORTHO05D002906 1.4e-08 62.8 79 50.6
Thecc.06G123400 Theobroma cacao HOM05D002677 ORTHO05D002906 1.4e-08 62.8 84 48.8
Aa31LG7G2290 Aethionema arabicum HOM05D002677 ORTHO05D002906 1.9e-08 62.4 86 46.5
Medtr8g021237 Medicago truncatula HOM05D002677 ORTHO05D002906 1.9e-08 62.4 70 55.7
Sopen06g022420 Solanum pennellii HOM05D002677 ORTHO05D002906 1.9e-08 62.4 74 52.7
EL10Ac7g16436 Beta vulgaris HOM05D002677 ORTHO05D002906 2.5e-08 62.0 74 54.1
CsaV3_7G034300 Cucumis sativus L. HOM05D002677 ORTHO05D002906 2.5e-08 62.0 79 50.6
Nn6g35685 Nelumbo nucifera HOM05D002677 ORTHO05D002906 2.5e-08 62.0 70 54.3
PSO104G0026 Papaver somniferum HOM05D002677 ORTHO05D002906 2.5e-08 62.0 92 47.8
Phvul.009G262800 Phaseolus vulgaris HOM05D002677 ORTHO05D002906 2.5e-08 62.0 77 49.4
Aa31LG4G2820 Aethionema arabicum HOM05D002677 ORTHO05D002906 3.2e-08 61.6 81 49.4
CiPaw.01G216700 Carya illinoinensis HOM05D002677 ORTHO05D002906 3.2e-08 61.6 77 46.8
Gohir.D05G141700 Gossypium hirsutum HOM05D002677 ORTHO05D002906 3.2e-08 61.6 75 52.0
Gorai.009G145800 Gossypium raimondii HOM05D002677 ORTHO05D002906 3.2e-08 61.6 75 52.0
Manes.04G147300 Manihot esculenta HOM05D002677 ORTHO05D002906 3.2e-08 61.6 79 48.1
Phvul.010G128000 Phaseolus vulgaris HOM05D002677 ORTHO05D002906 3.2e-08 61.6 79 48.1
Actinidia32198 Actinidia chinensis HOM05D002677 ORTHO05D002906 4.2e-08 61.2 74 51.4
AL2G32180 Arabidopsis lyrata HOM05D002677 ORTHO05D002906 4.2e-08 61.2 79 48.1
THA.LOC104812257 Tarenaya hassleriana HOM05D002677 ORTHO05D002906 4.2e-08 61.2 79 46.8
Glyma.07G040800 Glycine max HOM05D002677 ORTHO05D002906 5.5e-08 60.8 85 45.9
Gohir.A05G139500 Gossypium hirsutum HOM05D002677 ORTHO05D002906 5.5e-08 60.8 75 52.0
Lsat_1_v5_gn_4_92641 Lactuca sativa HOM05D002677 ORTHO05D002906 5.5e-08 60.8 70 54.3
PSO421G0285 Papaver somniferum HOM05D002677 ORTHO05D002906 5.5e-08 60.8 91 47.3
TAR624G0298 Trochodendron aralioides HOM05D002677 ORTHO05D002906 5.5e-08 60.8 76 50.0
VMungo0331G1783 Vigna mungo HOM05D002677 ORTHO05D002906 5.5e-08 60.8 79 46.8
GSVIVG01016727001 Vitis vinifera HOM05D002677 ORTHO05D002906 5.5e-08 60.8 70 54.3
Cc04_g01130 Coffea canephora HOM05D002677 ORTHO05D002906 7.1e-08 60.5 77 54.5
Dinv37852 Davidia involucrata HOM05D002677 ORTHO05D002906 7.1e-08 60.5 72 52.8
Gorai.011G061600 Gossypium raimondii HOM05D002677 ORTHO05D002906 7.1e-08 60.5 80 51.2
Sed0025151 Sechium edule HOM05D002677 ORTHO05D002906 7.1e-08 60.5 79 48.1
ClCG09G001110 Citrullus lanatus HOM05D001225 ORTHO05D001252 9.3e-08 60.1 77 49.4
MELO3C024339.2 Cucumis melo HOM05D002677 ORTHO05D002906 9.3e-08 60.1 79 48.1
Lsat_1_v5_gn_1_37921 Lactuca sativa HOM05D002677 ORTHO05D002906 9.3e-08 60.1 68 54.4
Nn8g38592 Nelumbo nucifera HOM05D002677 ORTHO05D002906 9.3e-08 60.1 74 50.0
Duzib192G0993 Durio zibethinus HOM05D002677 ORTHO05D002906 1.2e-07 59.7 77 49.4
Sed0006448 Sechium edule HOM05D002677 ORTHO05D002906 1.2e-07 59.7 77 48.1
Hund05722 Selenicereus undatus HOM05D002677 ORTHO05D002906 1.2e-07 59.7 80 50.0
Aqoxy7G04093 Aquilegia oxysepala HOM05D002677 ORTHO05D002906 1.6e-07 59.3 70 48.6
CiPaw.02G134300 Carya illinoinensis HOM05D002677 ORTHO05D002906 1.6e-07 59.3 70 48.6
Glyma.16G009400 Glycine max HOM05D002677 ORTHO05D002906 1.6e-07 59.3 79 46.8
Psat4g167720 Pisum sativum HOM05D002677 ORTHO05D002906 1.6e-07 59.3 79 46.8
Potri.003G068300 Populus trichocarpa HOM05D002677 ORTHO05D002906 1.6e-07 59.3 75 49.3
TPR.G16733 Trifolium pratense HOM05D002677 ORTHO05D002906 1.6e-07 59.3 77 49.4
vmacro15046 Vaccinium macrocarpon HOM05D002677 ORTHO05D002906 1.6e-07 59.3 70 51.4
Thhalv10019851m.g Eutrema salsugineum HOM05D002677 ORTHO05D002906 2.1e-07 58.9 81 49.4
FvH4_6g35070 Fragaria vesca HOM05D002677 ORTHO05D002906 2.1e-07 58.9 71 52.1
FAN05G3688 Fragaria x ananassa HOM05D002677 ORTHO05D002906 2.1e-07 58.9 71 52.1
FAN14G5432 Fragaria x ananassa HOM05D002677 ORTHO05D002906 2.1e-07 58.9 71 52.1
RcHm_v2.0_Chr2g0146241 Rosa chinensis HOM05D002677 ORTHO05D002906 2.1e-07 58.9 71 52.1
A07p38650 Brassica napus HOM05D002677 ORTHO05D002906 2.7e-07 58.5 78 44.9
FAN09G4841 Fragaria x ananassa HOM05D002677 ORTHO05D002906 2.7e-07 58.5 70 52.9
MD09G1179400 Malus domestica HOM05D002677 ORTHO05D002906 2.7e-07 58.5 70 51.4
Sp5g27570 Schrenkiella parvula HOM05D002677 ORTHO05D002906 2.7e-07 58.5 83 45.8
BcaC08g46700 Brassica carinata HOM05D002677 ORTHO05D002906 3.5e-07 58.2 78 44.9
C06p46840 Brassica napus HOM05D002677 ORTHO05D002906 3.5e-07 58.2 78 44.9
BolC6t39725H Brassica oleracea HOM05D002677 ORTHO05D002906 3.5e-07 58.2 78 44.9
CSS0009017 Camellia sinensis var. sinensis HOM05D002677 ORTHO05D002906 3.5e-07 58.2 70 50.0
FAN02G0141 Fragaria x ananassa HOM05D002677 ORTHO05D002906 3.5e-07 58.2 70 52.9
Manes.11G017200 Manihot esculenta HOM05D002677 ORTHO05D002906 3.5e-07 58.2 83 44.6
BcaB05g24758 Brassica carinata HOM05D002677 ORTHO05D002906 4.6e-07 57.8 75 48.0
Gohir.A10G055600 Gossypium hirsutum HOM05D002677 ORTHO05D002906 4.6e-07 57.8 83 50.6
PGR119G0443 Punica granatum HOM05D002677 ORTHO05D002906 4.6e-07 57.8 69 52.2
BcaC08g45704 Brassica carinata HOM05D002677 ORTHO05D002906 6.1e-07 57.4 79 45.6
BolC6t38592H Brassica oleracea HOM05D002677 ORTHO05D002906 6.1e-07 57.4 79 45.6
PSO386G0050 Papaver somniferum HOM05D002677 ORTHO05D002906 6.1e-07 57.4 72 47.2
AT1G72490 Arabidopsis thaliana HOM05D002677 ORTHO05D002906 1.0e-06 56.6 82 50.0
Haze_16056 Corylus avellana HOM05D002677 ORTHO05D002906 1.0e-06 56.6 71 49.3
Lj3g0022268 Lotus japonicus HOM05D002677 ORTHO05D002906 1.0e-06 56.6 70 42.9
MD17G1165000 Malus domestica HOM05D002677 ORTHO05D002906 1.0e-06 56.6 70 50.0
Potri.006G140100 Populus trichocarpa HOM05D002677 ORTHO05D002906 1.0e-06 56.6 80 50.0
Actinidia30235 Actinidia chinensis HOM05D002677 ORTHO05D002906 1.3e-06 56.2 69 55.1
C06p34900 Brassica napus HOM05D002677 ORTHO05D002906 1.3e-06 56.2 79 44.3
CANSAT56G2660 Cannabis sativa HOM05D002677 ORTHO05D002906 1.3e-06 56.2 71 43.7
Cpa.g.sc25.141 Carica papaya HOM05D002677 ORTHO05D002906 1.3e-06 56.2 80 46.2
MBI19_g05294_MAGBIO Magnolia biondii HOM05D002677 ORTHO05D002906 1.3e-06 56.2 70 50.0
PSO724G1034 Papaver somniferum HOM05D002677 ORTHO05D002906 1.3e-06 56.2 74 47.3
QL05p003883 Quercus lobata HOM05D002677 ORTHO05D002906 1.3e-06 56.2 68 47.1
Ah.08g217040 Amaranthus hybridus HOM05D002677 ORTHO05D002906 1.8e-06 55.8 74 50.0
BcaB03g15671 Brassica carinata HOM05D002677 ORTHO05D002906 1.8e-06 55.8 78 44.9
Carub.0002s1934 Capsella rubella HOM05D002677 ORTHO05D002906 1.8e-06 55.8 82 50.0
A07p30200 Brassica napus HOM05D002677 ORTHO05D002906 2.3e-06 55.5 82 43.9
BraA07t30657Z Brassica rapa HOM05D002677 ORTHO05D002906 2.3e-06 55.5 82 43.9
HanXRQChr09g0277051 Helianthus annuus HOM05D002677 ORTHO05D002906 2.3e-06 55.5 68 50.0
Lalb_Chr15g0076781 Lupinus albus HOM05D002677 ORTHO05D002906 2.3e-06 55.5 73 49.3
C06p34940 Brassica napus HOM05D002677 ORTHO05D002906 3.0e-06 55.1 79 43.0
Sc12g0010730 Simmondsia chinensis HOM05D002677 ORTHO05D002906 3.0e-06 55.1 76 46.1
THA.LOC104814044 Tarenaya hassleriana HOM05D002677 ORTHO05D002906 3.0e-06 55.1 86 41.9
TAR636G2539 Trochodendron aralioides HOM05D002677 ORTHO05D002906 3.0e-06 55.1 75 49.3
BcaC03g15392 Brassica carinata HOM05D002677 ORTHO05D002906 3.9e-06 54.7 79 43.0
BraA02t06851Z Brassica rapa HOM05D002677 ORTHO05D002906 3.9e-06 54.7 82 41.5
Prupe.3G038300 Prunus persica HOM05D002677 ORTHO05D002906 3.9e-06 54.7 70 51.4
A02p18030 Brassica napus HOM05D002677 ORTHO05D002906 5.1e-06 54.3 82 41.5
ATR0006G050 Amborella trichopoda HOM05D002677 ORTHO05D002906 8.7e-06 53.5 77 41.6
DCAR_016108 Daucus carota HOM05D002677 ORTHO05D002906 8.7e-06 53.5 69 47.8


User provided reference genes

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