Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0006224g0060 Nicotiana tabacum HOM05D002873 ORTHO05D002978 8.5e-22 106.3 61 100.0
Sopen02g034300 Solanum pennellii HOM05D002873 ORTHO05D002978 1.3e-14 82.4 64 76.6
Prupe.3G244200 Prunus persica HOM05D002873 ORTHO05D002978 3.8e-14 80.9 63 77.8
Prupe.3G244300 Prunus persica HOM05D002873 ORTHO05D002978 3.8e-14 80.9 63 77.8
Prupe.3G244500 Prunus persica HOM05D002873 ORTHO05D002978 3.8e-14 80.9 63 77.8
Prupe.3G244100 Prunus persica HOM05D002873 ORTHO05D002978 6.5e-14 80.1 63 77.8
Prupe.3G244400 Prunus persica HOM05D002873 ORTHO05D002978 1.1e-13 79.3 63 76.2
Prupe.3G244600 Prunus persica HOM05D002873 ORTHO05D002978 1.4e-13 79.0 63 76.2
THA.LOC109117084 Tarenaya hassleriana HOM05D002873 ORTHO05D002978 1.9e-13 78.6 63 74.6
Lalb_Chr04g0258251 Lupinus albus HOM05D002873 ORTHO05D002978 2.5e-13 78.2 62 77.4
Dinv33894 Davidia involucrata HOM05D002873 ORTHO05D002978 4.2e-13 77.4 64 73.4
Ca_06717_v3 Cicer arietinum L. HOM05D002873 ORTHO05D002978 9.4e-13 76.3 60 76.7
RcHm_v2.0_Chr2g0163991 Rosa chinensis HOM05D002873 ORTHO05D002978 1.2e-12 75.9 64 73.4
Dinv38615 Davidia involucrata HOM05D002873 ORTHO05D002978 2.3e-11 71.6 64 68.8
Sed0008680 Sechium edule HOM05D002873 ORTHO05D002978 3.0e-11 71.2 63 69.8
arahy.Tifrunner.gnm1.ann1.4T36CH Arachis hypogaea HOM05D002873 ORTHO05D002978 5.1e-11 70.5 62 67.7
arahy.Tifrunner.gnm1.ann1.JTM1YJ Arachis hypogaea HOM05D002873 ORTHO05D002978 5.1e-11 70.5 62 67.7
TWI34G1371 Tripterygium wilfordii HOM05D002873 ORTHO05D002978 6.7e-11 70.1 63 66.7
Sopen02g027770 Solanum pennellii HOM05D002873 ORTHO05D002978 8.8e-11 69.7 64 68.8
GSVIVG01036492001 Vitis vinifera HOM05D002873 ORTHO05D002978 8.8e-11 69.7 64 67.2
Aqoxy6G00630 Aquilegia oxysepala HOM05D002873 ORTHO05D002978 1.1e-10 69.3 65 66.2
Aqoxy6G02621 Aquilegia oxysepala HOM05D002873 ORTHO05D002978 1.1e-10 69.3 65 64.6
Haze_14075 Corylus avellana HOM05D002873 ORTHO05D002978 1.1e-10 69.3 63 65.1
PGSC0003DMG400001534 Solanum tuberosum HOM05D002873 ORTHO05D002978 1.1e-10 69.3 64 68.8
Dinv33895 Davidia involucrata HOM05D002873 ORTHO05D002978 1.5e-10 68.9 64 68.8
Prupe.3G244700 Prunus persica HOM05D002873 ORTHO05D002978 1.5e-10 68.9 62 71.0
Haze_17643 Corylus avellana HOM05D002873 ORTHO05D002978 2.0e-10 68.6 63 65.1
Actinidia26314 Actinidia chinensis HOM05D002873 ORTHO05D002978 2.6e-10 68.2 64 68.8
Carub.0003s0158 Capsella rubella HOM05D002873 ORTHO05D002978 2.6e-10 68.2 64 64.1
MD09G1079600 Malus domestica HOM05D002873 ORTHO05D002978 2.6e-10 68.2 63 71.4
CsaV3_5G004620 Cucumis sativus L. HOM05D002873 ORTHO05D002978 3.3e-10 67.8 63 68.3
AL3G11800 Arabidopsis lyrata HOM05D002873 ORTHO05D002978 4.4e-10 67.4 64 64.1
Cfa020560 Carpinus fangiana HOM05D002873 ORTHO05D002978 4.4e-10 67.4 63 63.5
Phvul.004G047300 Phaseolus vulgaris HOM05D002873 ORTHO05D002978 4.4e-10 67.4 62 64.5
Eucgr.I02095 Eucalyptus grandis HOM05D002873 ORTHO05D002978 7.4e-10 66.6 63 66.7
Solyc02g082990.4 Solanum lycopersicum HOM05D002873 ORTHO05D002978 7.4e-10 66.6 64 67.2
A02p10830 Brassica napus HOM05D002873 ORTHO05D002978 9.7e-10 66.2 63 60.3
BraA02t06145Z Brassica rapa HOM05D002873 ORTHO05D002978 9.7e-10 66.2 63 60.3
Dinv36852 Davidia involucrata HOM05D002873 ORTHO05D002978 9.7e-10 66.2 63 65.1
BcaC03g14385 Brassica carinata HOM05D002873 ORTHO05D002978 2.8e-09 64.7 63 58.7
C02p17950 Brassica napus HOM05D002873 ORTHO05D002978 2.8e-09 64.7 63 58.7
BolC2t07926H Brassica oleracea HOM05D002873 ORTHO05D002978 2.8e-09 64.7 63 58.7
FAN02G0494 Fragaria x ananassa HOM05D002873 ORTHO05D002978 3.7e-09 64.3 64 65.6
Migut.H00561 Erythranthe guttata HOM05D002873 ORTHO05D002978 8.2e-09 63.2 64 65.6
AT3G02480 Arabidopsis thaliana HOM05D002873 ORTHO05D002978 1.1e-08 62.8 64 60.9
Migut.H00555 Erythranthe guttata HOM05D002873 ORTHO05D002978 1.1e-08 62.8 57 61.4
BcaC09g47705 Brassica carinata HOM05D002873 ORTHO05D002978 1.4e-08 62.4 64 59.4
BNapus_Darmor_BZH_scaffold_208p00010 Brassica napus HOM05D002873 ORTHO05D002978 1.4e-08 62.4 64 59.4
BolC1t05901H Brassica oleracea HOM05D002873 ORTHO05D002978 1.4e-08 62.4 64 59.4
BraSC141t45633Z Brassica rapa HOM05D002873 ORTHO05D002978 1.4e-08 62.4 64 59.4
Glyma.08G255700 Glycine max HOM05D002873 ORTHO05D002978 1.8e-08 62.0 60 65.0
Peaxi162Scf00479g00055 Petunia axillaris HOM05D002873 ORTHO05D002978 1.8e-08 62.0 64 62.5
BNapus_Darmor_BZH_scaffold_122p00010 Brassica napus HOM05D002873 ORTHO05D002978 4.1e-08 60.8 64 57.8
BNapus_Darmor_BZH_scaffold_99p00020 Brassica napus HOM05D002873 ORTHO05D002978 4.1e-08 60.8 64 57.8
BolC1t05900H Brassica oleracea HOM05D002873 ORTHO05D002978 4.1e-08 60.8 64 57.8
Sc11g0008050 Simmondsia chinensis HOM05D002873 ORTHO05D002978 4.1e-08 60.8 64 59.4
Actinidia18105 Actinidia chinensis HOM05D002873 ORTHO05D002978 5.3e-08 60.5 64 62.5
Solyc02g089570.3 Solanum lycopersicum HOM05D002873 ORTHO05D002978 5.3e-08 60.5 64 64.1
CARHR288730 Cardamine hirsuta HOM05D002873 ORTHO05D002978 6.9e-08 60.1 58 63.8
Cpa.g.sc188.26 Carica papaya HOM05D002873 ORTHO05D002978 6.9e-08 60.1 62 61.3
Medtr7g109750 Medicago truncatula HOM05D002873 ORTHO05D002978 9.1e-08 59.7 58 69.0
Peaxi162Scf00479g00423 Petunia axillaris HOM05D002873 ORTHO05D002978 9.1e-08 59.7 64 60.9
Phvul.008G022400 Phaseolus vulgaris HOM05D002873 ORTHO05D002978 9.1e-08 59.7 69 58.0
THA.LOC109116088 Tarenaya hassleriana HOM05D002873 ORTHO05D002978 1.2e-07 59.3 63 60.3
Sed0011149 Sechium edule HOM05D002873 ORTHO05D002978 2.0e-07 58.5 70 58.6
BcaC01g04444 Brassica carinata HOM05D002873 ORTHO05D002978 5.9e-07 57.0 63 58.7
C03p40070 Brassica napus HOM05D002873 ORTHO05D002978 5.9e-07 57.0 63 58.7
BolC3t16273H Brassica oleracea HOM05D002873 ORTHO05D002978 5.9e-07 57.0 63 58.7
A03p32950 Brassica napus HOM05D002873 ORTHO05D002978 7.7e-07 56.6 63 58.7
BraA03t12463Z Brassica rapa HOM05D002873 ORTHO05D002978 7.7e-07 56.6 63 58.7
MELO3C022078.2 Cucumis melo HOM05D002873 ORTHO05D002978 7.7e-07 56.6 63 58.7
FAN05G4367 Fragaria x ananassa HOM05D002873 ORTHO05D002978 7.7e-07 56.6 64 60.9
RcHm_v2.0_Chr2g0164011 Rosa chinensis HOM05D002873 ORTHO05D002978 7.7e-07 56.6 63 61.9
FAN09G3043 Fragaria x ananassa HOM05D002873 ORTHO05D002978 1.0e-06 56.2 59 61.0
Glyma.19G040000 Glycine max HOM05D002873 ORTHO05D002978 1.0e-06 56.2 61 63.9
Peaxi162Scf00479g00065 Petunia axillaris HOM05D002873 ORTHO05D002978 1.0e-06 56.2 64 59.4
CsaV3_5G038880 Cucumis sativus L. HOM05D002873 ORTHO05D002978 1.3e-06 55.8 63 57.1
Nitab4.5_0015566g0010 Nicotiana tabacum HOM05D002873 ORTHO05D002978 1.3e-06 55.8 64 62.5
PSO478G1110 Papaver somniferum HOM05D002873 ORTHO05D002978 1.7e-06 55.5 64 57.8
Solyc02g065640.3 Solanum lycopersicum HOM05D002873 ORTHO05D002978 1.7e-06 55.5 64 60.9
CSS0045706 Camellia sinensis var. sinensis HOM05D002873 ORTHO05D002978 2.2e-06 55.1 63 61.9
CSS0047860 Camellia sinensis var. sinensis HOM05D002873 ORTHO05D002978 2.2e-06 55.1 63 61.9
Psat3g191840 Pisum sativum HOM05D002873 ORTHO05D002978 2.2e-06 55.1 60 58.3
Sed0026183 Sechium edule HOM05D002873 ORTHO05D002978 2.2e-06 55.1 63 55.6
Cfa007988 Carpinus fangiana HOM05D002873 ORTHO05D002978 2.9e-06 54.7 83 45.8
Cc00_g21590 Coffea canephora HOM05D002873 ORTHO05D002978 2.9e-06 54.7 64 59.4
Haze_14086 Corylus avellana HOM05D002873 ORTHO05D002978 2.9e-06 54.7 81 46.9
Nitab4.5_0006524g0010 Nicotiana tabacum HOM05D002873 ORTHO05D002978 3.8e-06 54.3 66 56.1
Dinv34873 Davidia involucrata HOM05D002873 ORTHO05D002978 5.0e-06 53.9 66 57.6
Rhsim08G0081300 Rhododendron simsii HOM05D002873 ORTHO05D002978 5.0e-06 53.9 42 78.6
CsaV3_5G004610 Cucumis sativus L. HOM05D002873 ORTHO05D002978 6.5e-06 53.5 63 57.1
Medtr7g020780 Medicago truncatula HOM05D002873 ORTHO05D002978 8.5e-06 53.1 63 58.7
Hund13793 Selenicereus undatus HOM05D002873 ORTHO05D002978 8.5e-06 53.1 65 58.5


User provided reference genes

Program Settings