Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0006211g0050 Nicotiana tabacum HOM05D000963 ORTHO05D005131 4.0e-37 157.5 77 100.0
PGSC0003DMG400036067 Solanum tuberosum HOM05D000963 ORTHO05D001540 4.8e-22 107.5 59 86.4
Sc05g0004130 Simmondsia chinensis HOM05D000963 ORTHO05D005131 8.2e-22 106.7 54 92.6
DCAR_001146 Daucus carota HOM05D000963 ORTHO05D005131 1.4e-21 105.9 54 92.6
DCAR_001525 Daucus carota HOM05D000963 ORTHO05D005131 1.4e-21 105.9 54 92.6
DCAR_018748 Daucus carota HOM05D003334 ORTHO05D004076 1.4e-21 105.9 54 92.6
DCAR_032037 Daucus carota HOM05D000963 ORTHO05D005131 1.4e-21 105.9 54 92.6
Dinv39831 Davidia involucrata HOM05D000963 ORTHO05D004715 1.4e-21 105.9 54 92.6
ECA074G0007 Erigeron canadensis HOM05D000963 ORTHO05D004715 1.4e-21 105.9 54 92.6
ECA074G0008 Erigeron canadensis HOM05D000963 ORTHO05D004715 1.4e-21 105.9 54 92.6
ECA169G0003 Erigeron canadensis HOM05D000963 ORTHO05D005131 1.4e-21 105.9 54 92.6
Gohir.D03G074448 Gossypium hirsutum HOM05D000963 ORTHO05D005131 1.4e-21 105.9 54 92.6
SalBow6G4874 Salvia bowleyana HOM05D000963 ORTHO05D005131 1.4e-21 105.9 54 92.6
Sc25g0002000 Simmondsia chinensis HOM05D000963 ORTHO05D005131 1.4e-21 105.9 54 92.6
PGSC0003DMG400018892 Solanum tuberosum HOM05D000963 ORTHO05D005131 1.4e-21 105.9 54 92.6
SGA_v2.0_scaffold893G53701 Striga asiatica HOM05D000963 ORTHO05D005131 1.4e-21 105.9 54 92.6
TAR365G0238 Trochodendron aralioides HOM05D001325 ORTHO05D001540 1.4e-21 105.9 54 92.6
unitig_87.g27920 Utricularia gibba HOM05D000963 ORTHO05D001540 1.4e-21 105.9 54 92.6
unitig_87.g28036 Utricularia gibba HOM05D000963 ORTHO05D005131 1.4e-21 105.9 54 92.6
unitig_91.g26518 Utricularia gibba HOM05D001325 ORTHO05D001540 1.4e-21 105.9 54 92.6
unitig_91.g26528 Utricularia gibba HOM05D000963 ORTHO05D005131 1.4e-21 105.9 54 92.6
Gohir.A09G101420 Gossypium hirsutum HOM05D000963 ORTHO05D005131 1.8e-21 105.5 54 90.7
Oeu039801.1 Olea europaea HOM05D000963 ORTHO05D005131 5.3e-21 104.0 57 86.0
Sc05g0004060 Simmondsia chinensis HOM05D000963 ORTHO05D005131 6.9e-21 103.6 54 88.9
MBI13_g30267_MAGBIO Magnolia biondii HOM05D000571 ORTHO05D000435 9.0e-21 103.2 54 88.9
Hund25913 Selenicereus undatus HOM05D000963 ORTHO05D005131 9.0e-21 103.2 54 88.9
Sc03g0007080 Simmondsia chinensis HOM05D000963 ORTHO05D005131 9.0e-21 103.2 54 90.7
SHI47131 Sapria himalayana HOM05D000963 ORTHO05D005131 1.2e-20 102.8 57 84.2
PGSC0003DMG400020295 Solanum tuberosum HOM05D000963 ORTHO05D005131 1.2e-20 102.8 54 88.9
TAR633G0621 Trochodendron aralioides HOM05D000963 ORTHO05D005131 1.2e-20 102.8 52 92.3
vmacro22396 Vaccinium macrocarpon HOM05D000963 ORTHO05D005131 1.5e-20 102.4 54 90.7
vmacro22416 Vaccinium macrocarpon HOM05D000963 ORTHO05D005131 1.5e-20 102.4 54 90.7
vmacro22421 Vaccinium macrocarpon HOM05D000963 ORTHO05D005131 1.5e-20 102.4 54 90.7
EL10As10g23961 Beta vulgaris HOM05D000963 ORTHO05D005131 2.0e-20 102.1 54 90.7
Sopen02g009100 Solanum pennellii HOM05D000963 ORTHO05D005131 2.0e-20 102.1 54 87.0
EL10As6g23662 Beta vulgaris HOM05D001325 ORTHO05D001540 2.6e-20 101.7 54 88.9
unitig_8.g4106 Utricularia gibba HOM05D000963 ORTHO05D005131 2.6e-20 101.7 54 90.7
Gohir.A12G092444 Gossypium hirsutum HOM05D000963 ORTHO05D005131 3.4e-20 101.3 54 85.2
Gohir.D02G117532 Gossypium hirsutum HOM05D000963 ORTHO05D005131 1.7e-19 99.0 51 90.2
Gohir.D04G090233 Gossypium hirsutum HOM05D000963 ORTHO05D005131 2.2e-19 98.6 54 87.0
Gohir.A01G056250 Gossypium hirsutum HOM05D000963 ORTHO05D005131 2.9e-19 98.2 55 81.8
Nitab4.5_0004841g0030 Nicotiana tabacum HOM05D000963 ORTHO05D005131 5.0e-19 97.4 54 87.0
Sc05g0002290 Simmondsia chinensis HOM05D000963 ORTHO05D005131 5.0e-19 97.4 54 85.2
RhsimPtG0005500 Rhododendron simsii HOM05D000963 ORTHO05D005131 6.5e-19 97.1 54 85.2
CSS0000719 Camellia sinensis var. sinensis HOM05D000963 ORTHO05D005131 8.5e-19 96.7 54 81.5
Cpa.g.sc389.2 Carica papaya HOM05D000963 ORTHO05D005131 1.1e-18 96.3 54 81.5
Oeu015125.1 Olea europaea HOM05D000963 ORTHO05D010201 1.4e-18 95.9 52 86.5
PGSC0003DMG400046976 Solanum tuberosum HOM05D000963 ORTHO05D005131 1.9e-18 95.5 54 81.5
SHI37614 Sapria himalayana HOM05D000963 ORTHO05D005131 2.5e-18 95.1 53 84.9
Gohir.D09G105350 Gossypium hirsutum HOM05D000963 ORTHO05D005131 3.2e-18 94.7 54 83.3
SHI36398 Sapria himalayana HOM05D000963 ORTHO05D005131 3.2e-18 94.7 54 85.2
Sc14g0005060 Simmondsia chinensis HOM05D000963 ORTHO05D005131 4.2e-18 94.4 54 85.2
SHI42531 Sapria himalayana HOM05D000963 ORTHO05D005131 7.2e-18 93.6 54 81.5
Migut.D01379 Erythranthe guttata HOM05D000963 ORTHO05D005131 9.3e-18 93.2 63 69.8
vmacro09305 Vaccinium macrocarpon HOM05D000963 ORTHO05D005131 9.3e-18 93.2 54 83.3
Gorai.012G100900 Gossypium raimondii HOM05D000963 ORTHO05D005131 1.2e-17 92.8 54 81.5
CAN.G1185.10 Capsicum annuum HOM05D000963 ORTHO05D004715 2.7e-17 91.7 56 78.6
Gohir.D10G125850 Gossypium hirsutum HOM05D000963 ORTHO05D005131 1.0e-16 89.7 54 77.8
Nitab4.5_0008665g0050 Nicotiana tabacum HOM05D000963 ORTHO05D005131 1.8e-16 89.0 52 80.8
Oeu012784.1 Olea europaea HOM05D000963 ORTHO05D005131 3.9e-16 87.8 53 81.1
Nitab4.5_0000017g0110 Nicotiana tabacum HOM05D000963 ORTHO05D005131 6.7e-16 87.0 45 86.7
PGSC0003DMG400001215 Solanum tuberosum HOM05D000963 ORTHO05D005131 1.5e-15 85.9 54 75.9
Gohir.1Z049680 Gossypium hirsutum HOM05D000963 ORTHO05D005131 3.3e-15 84.7 49 79.6
MBI16_g46635_MAGBIO Magnolia biondii HOM05D000963 ORTHO05D005131 3.3e-15 84.7 55 74.5
Solyc01g017050.1 Solanum lycopersicum HOM05D000963 ORTHO05D005131 2.8e-14 81.6 42 88.1
Sopen11g020190 Solanum pennellii HOM05D000963 ORTHO05D005131 8.2e-14 80.1 54 74.1
Gorai.002G152100 Gossypium raimondii HOM05D000963 ORTHO05D005131 2.4e-13 78.6 52 69.2
SGA_v2.0_scaffold126G33874 Striga asiatica HOM05D000963 ORTHO05D005131 2.4e-13 78.6 46 80.4
vmacro09302 Vaccinium macrocarpon HOM05D000963 ORTHO05D005131 2.4e-13 78.6 53 77.4
Cpa.g.sc86.15 Carica papaya HOM05D000963 ORTHO05D005131 4.1e-13 77.8 52 71.2
Gorai.005G078000 Gossypium raimondii HOM05D000963 ORTHO05D005131 6.9e-13 77.0 72 58.3
EL10Ac7g17438 Beta vulgaris HOM05D000963 ORTHO05D005131 1.5e-12 75.9 44 81.8
VMungo1024G0002 Vigna mungo HOM05D000963 ORTHO05D005131 3.4e-12 74.7 53 67.9
SEGI_13287 Sequoiadendron giganteum HOM05D000963 ORTHO05D005131 4.5e-12 74.3 45 77.8
BcaNung01517 Brassica carinata HOM05D000963 ORTHO05D005131 5.9e-12 73.9 38 92.1
Dinv44812 Davidia involucrata HOM05D000086 ORTHO05D000431 7.7e-12 73.6 42 81.0
Nitab4.5_0000729g0060 Nicotiana tabacum HOM05D000963 ORTHO05D005131 1.0e-11 73.2 48 70.8
Gohir.D01G121360 Gossypium hirsutum HOM05D000963 ORTHO05D005131 1.3e-11 72.8 52 63.5
SEGI_10061 Sequoiadendron giganteum HOM05D000963 ORTHO05D005131 1.1e-10 69.7 43 74.4
Gohir.A13G086560 Gossypium hirsutum HOM05D000963 ORTHO05D005131 1.9e-10 68.9 38 84.2
SHI36889 Sapria himalayana HOM05D000963 ORTHO05D005131 3.2e-10 68.2 36 88.9
Gorai.007G303200 Gossypium raimondii HOM05D000963 ORTHO05D005131 9.4e-10 66.6 44 68.2
Gohir.D11G280866 Gossypium hirsutum HOM05D000963 ORTHO05D005131 2.7e-09 65.1 44 65.9
arahy.Tifrunner.gnm1.ann1.MJQ8WH Arachis hypogaea HOM05D000963 ORTHO05D011117 3.6e-09 64.7 36 80.6
Gohir.A12G053150 Gossypium hirsutum HOM05D000963 ORTHO05D005131 3.6e-09 64.7 38 81.6
Lsat_1_v5_gn_4_145420 Lactuca sativa HOM05D000963 ORTHO05D005131 3.9e-08 61.2 29 96.6
Oeu012823.1 Olea europaea HOM05D000963 ORTHO05D005131 1.5e-07 59.3 29 93.1
Eucgr.I02498 Eucalyptus grandis HOM05D003497 ORTHO05D003964 5.7e-07 57.4 40 65.0
arahy.Tifrunner.gnm1.ann1.05XESX Arachis hypogaea HOM05D010604 ORTHO05D012476 7.4e-07 57.0 37 70.3
arahy.Tifrunner.gnm1.ann1.0LX666 Arachis hypogaea HOM05D010604 ORTHO05D012476 7.4e-07 57.0 37 70.3
arahy.Tifrunner.gnm1.ann1.KZ3I51 Arachis hypogaea HOM05D010604 ORTHO05D012476 7.4e-07 57.0 37 70.3
Migut.D01399 Erythranthe guttata HOM05D000963 ORTHO05D011117 1.3e-06 56.2 54 59.3
CsaV3_UNG209450 Cucumis sativus L. HOM05D010604 ORTHO05D012476 4.8e-06 54.3 37 67.6
Lsat_1_v5_gn_4_50261 Lactuca sativa HOM05D004291 ORTHO05D005620 4.8e-06 54.3 37 67.6
Lsat_1_v5_gn_5_152921 Lactuca sativa HOM05D010604 ORTHO05D012476 4.8e-06 54.3 37 67.6
Potri.007G062061 Populus trichocarpa HOM05D010604 ORTHO05D012476 4.8e-06 54.3 37 67.6
RhsimMtG0000800 Rhododendron simsii HOM05D010604 ORTHO05D012476 4.8e-06 54.3 37 67.6
VMungo0329G0006 Vigna mungo HOM05D010604 ORTHO05D012476 4.8e-06 54.3 37 67.6


User provided reference genes

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