Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0006211g0030 Nicotiana tabacum HOM05D006061 ORTHO05D007450 0.0e+00 1241.1 621 100.0
Nitab4.5_0002085g0150 Nicotiana tabacum HOM05D006061 ORTHO05D007450 0.0e+00 1183.7 627 95.2
PGSC0003DMG401020085 Solanum tuberosum HOM05D006061 ORTHO05D007450 9.4e-294 1013.1 625 81.6
Peaxi162Scf00517g00313 Petunia axillaris HOM05D006061 ORTHO05D007450 7.4e-291 1003.4 641 79.6
Sopen06g035030 Solanum pennellii HOM05D006061 ORTHO05D007450 1.6e-285 985.7 625 79.8
Solyc06g083640.4 Solanum lycopersicum HOM05D006061 ORTHO05D007450 2.6e-283 978.4 625 79.4
CAN.G771.51 Capsicum annuum HOM05D006061 ORTHO05D007450 1.9e-270 935.6 639 75.9
SGA_v2.0_scaffold3G01591 Striga asiatica HOM05D006061 ORTHO05D007450 4.8e-181 638.6 642 53.4
Actinidia30104 Actinidia chinensis HOM05D006061 ORTHO05D007450 7.0e-180 634.8 609 55.7
Migut.N02246 Erythranthe guttata HOM05D006061 ORTHO05D007450 4.5e-179 632.1 629 53.9
MSTRG.12506 Avicennia marina HOM05D006061 ORTHO05D007450 1.5e-174 617.1 629 51.7
SalBow6G4925 Salvia bowleyana HOM05D006061 ORTHO05D007450 4.5e-171 605.5 629 52.3
Prupe.8G209500 Prunus persica HOM05D006061 ORTHO05D007450 5.7e-166 588.6 627 51.8
TAR365G1230 Trochodendron aralioides HOM05D006061 ORTHO05D007450 2.0e-163 580.1 633 52.8
Cfa002517 Carpinus fangiana HOM05D006061 ORTHO05D007450 2.9e-162 576.2 629 50.6
Duzib138G1183 Durio zibethinus HOM05D006061 ORTHO05D007450 4.7e-160 568.9 628 50.2
Thecc.01G244800 Theobroma cacao HOM05D006061 ORTHO05D007450 1.5e-158 563.9 628 50.2
Gorai.007G151600 Gossypium raimondii HOM05D006061 ORTHO05D007450 5.7e-158 562.0 628 50.3
Gohir.A11G135100 Gossypium hirsutum HOM05D006061 ORTHO05D007450 1.8e-156 557.0 631 50.1
TWI59G0704 Tripterygium wilfordii HOM05D006061 ORTHO05D007450 7.7e-155 551.6 631 49.3
Lj1A80G16 Lonicera japonica HOM05D006061 ORTHO05D007450 1.3e-154 550.8 640 49.7
MD10G1171000 Malus domestica HOM05D006061 ORTHO05D007450 5.0e-154 548.9 627 49.1
RcHm_v2.0_Chr6g0285561 Rosa chinensis HOM05D006061 ORTHO05D007450 5.0e-154 548.9 628 48.6
GSVIVG01028489001 Vitis vinifera HOM05D006061 ORTHO05D007450 8.6e-154 548.1 574 53.0
Gohir.D11G141300 Gossypium hirsutum HOM05D006061 ORTHO05D007450 4.2e-153 545.8 631 49.8
Atru.chr5.1926 Acer truncatum HOM05D006061 ORTHO05D007450 2.0e-150 537.0 629 48.5
Nn1g03086 Nelumbo nucifera HOM05D006061 ORTHO05D007450 7.0e-148 528.5 629 48.8
Sc05g0002480 Simmondsia chinensis HOM05D006061 ORTHO05D007450 1.6e-147 527.3 630 47.3
Potri.014G194800 Populus trichocarpa HOM05D006061 ORTHO05D007450 1.0e-146 524.6 630 48.6
FvH4_2g19870 Fragaria vesca HOM05D006061 ORTHO05D007450 5.0e-146 522.3 629 46.9
HanXRQChr13g0409031 Helianthus annuus HOM05D006061 ORTHO05D007450 8.6e-146 521.5 630 47.0
ClCG09G009420 Citrullus lanatus HOM05D006061 ORTHO05D007450 2.1e-144 516.9 631 47.9
Lsat_1_v5_gn_8_90281 Lactuca sativa HOM05D006061 ORTHO05D007450 2.8e-144 516.5 629 47.4
Ciclev10019392m.g Citrus clementina HOM05D006061 ORTHO05D007450 3.6e-144 516.2 627 48.6
THA.LOC104814544 Tarenaya hassleriana HOM05D006061 ORTHO05D007450 8.0e-144 515.0 629 47.2
Rhsim13G0041800 Rhododendron simsii HOM05D006061 ORTHO05D000758 1.0e-143 514.6 722 43.9
CsaV3_7G025440 Cucumis sativus L. HOM05D006061 ORTHO05D007450 1.3e-141 507.7 631 48.0
AUR62008856 Chenopodium quinoa HOM05D006061 ORTHO05D007450 4.9e-141 505.8 629 44.5
Eucgr.H00824 Eucalyptus grandis HOM05D006061 ORTHO05D007450 8.3e-141 505.0 628 46.0
CiPaw.04G108700 Carya illinoinensis HOM05D006061 ORTHO05D007450 3.5e-139 499.6 543 51.0
CANSAT01G1389 Cannabis sativa HOM05D006061 ORTHO05D007450 1.0e-138 498.0 634 46.5
Aqoxy5G00054 Aquilegia oxysepala HOM05D006061 ORTHO05D007450 1.7e-138 497.3 627 47.0
EL10Ac7g17761 Beta vulgaris HOM05D006061 ORTHO05D007450 9.5e-137 491.5 646 44.7
Haze_24749 Corylus avellana HOM05D006061 ORTHO05D007450 8.0e-136 488.4 707 42.9
MBI07_g08916_MAGBIO Magnolia biondii HOM05D006061 ORTHO05D007450 4.0e-135 486.1 633 45.8
Sabra14G0142900 Salix brachista HOM05D006061 ORTHO05D007450 4.4e-134 482.6 593 48.4
C07p00980 Brassica napus HOM05D006061 ORTHO05D007450 5.8e-134 482.3 625 45.4
BcaB03g16813 Brassica carinata HOM05D006061 ORTHO05D007450 9.8e-134 481.5 630 45.9
PSO170G3920 Papaver somniferum HOM05D006061 ORTHO05D007450 9.8e-134 481.5 629 44.8
PGR083G1193 Punica granatum HOM05D006061 ORTHO05D007450 2.2e-133 480.3 626 46.5
BcaC06g36697 Brassica carinata HOM05D006061 ORTHO05D007450 3.7e-133 479.6 625 45.3
BolC7t40535H Brassica oleracea HOM05D006061 ORTHO05D007450 3.7e-133 479.6 625 45.3
A07p00530 Brassica napus HOM05D006061 ORTHO05D007450 8.3e-133 478.4 627 45.0
Cc01_g08490 Coffea canephora HOM05D006061 ORTHO05D007450 1.9e-132 477.2 496 51.4
BraA07t27847Z Brassica rapa HOM05D006061 ORTHO05D007450 1.6e-131 474.2 627 44.8
AL3G47870 Arabidopsis lyrata HOM05D006061 ORTHO05D007450 2.7e-131 473.4 631 46.0
Phvul.001G168300 Phaseolus vulgaris HOM05D006061 ORTHO05D007450 7.8e-131 471.9 631 45.0
ECA236G2978 Erigeron canadensis HOM05D006061 ORTHO05D000758 1.0e-130 471.5 632 44.5
AT2G20210 Arabidopsis thaliana HOM05D006061 ORTHO05D007450 1.3e-130 471.1 632 46.4
Glyma.03G169900 Glycine max HOM05D006061 ORTHO05D007450 6.6e-130 468.8 623 44.5
Glyma.19G171100 Glycine max HOM05D006061 ORTHO05D007450 1.9e-129 467.2 624 45.5
Lj1g0026990 Lotus japonicus HOM05D006061 ORTHO05D007450 2.5e-129 466.8 626 45.8
Thhalv10001935m.g Eutrema salsugineum HOM05D006061 ORTHO05D007450 3.3e-129 466.5 630 44.8
COL.COLO4_08163 Corchorus olitorius HOM05D006061 ORTHO05D007450 2.8e-128 463.4 674 42.6
arahy.Tifrunner.gnm1.ann1.J8EIPB Arachis hypogaea HOM05D006061 ORTHO05D007450 6.2e-128 462.2 601 45.3
arahy.Tifrunner.gnm1.ann1.4WTK5H Arachis hypogaea HOM05D006061 ORTHO05D007450 3.1e-127 459.9 601 45.1
Aa31LG8G17130 Aethionema arabicum HOM05D006061 ORTHO05D007450 6.8e-127 458.8 630 44.6
Hund05498 Selenicereus undatus HOM05D006061 ORTHO05D007450 6.8e-127 458.8 636 44.0
Ca_08767_v3 Cicer arietinum L. HOM05D006061 ORTHO05D007450 2.9e-125 453.4 632 44.9
Manes.12G040800 Manihot esculenta HOM05D006061 ORTHO05D007450 2.1e-123 447.2 483 51.6
Psat3g050240 Pisum sativum HOM05D006061 ORTHO05D007450 1.5e-121 441.0 630 43.5
TPR.G7560 Trifolium pratense HOM05D006061 ORTHO05D007450 6.2e-120 435.6 640 44.7
Ah.15g093400 Amaranthus hybridus HOM05D006061 ORTHO05D007450 7.6e-118 428.7 630 42.2
FAN27G0211 Fragaria x ananassa HOM05D006061 ORTHO05D007450 2.3e-114 417.2 638 41.7
vmacro02729 Vaccinium macrocarpon HOM05D006061 ORTHO05D007450 2.5e-113 413.7 395 55.7
Medtr7g099450 Medicago truncatula HOM05D006061 ORTHO05D007450 1.3e-112 411.4 641 42.6
Sp3g33450 Schrenkiella parvula HOM05D006061 ORTHO05D007450 2.2e-109 400.6 483 47.4
ATR0787G120 Amborella trichopoda HOM05D006061 ORTHO05D007450 2.1e-107 394.0 662 39.4
Carub.0003s3454 Capsella rubella HOM05D006061 ORTHO05D007450 8.1e-104 382.1 483 46.2
FAN15G2648 Fragaria x ananassa HOM05D006061 ORTHO05D007450 7.4e-89 332.4 416 47.8
CSS0041718 Camellia sinensis var. sinensis HOM05D006061 ORTHO05D007450 5.8e-86 322.8 349 51.3
AUR62025388 Chenopodium quinoa HOM05D006061 ORTHO05D007450 2.3e-82 310.8 410 44.4
Lalb_Chr01g0019421 Lupinus albus HOM05D006061 ORTHO05D007450 1.1e-81 308.5 382 46.1
Sed0025129 Sechium edule HOM05D006061 ORTHO05D007450 1.8e-71 274.6 317 51.4
Cpa.g.sc8.208 Carica papaya HOM05D006061 ORTHO05D007450 1.5e-70 271.6 323 47.1
Oeu039640.1 Olea europaea HOM05D006061 ORTHO05D007450 7.4e-65 252.7 225 58.7
VMungo1383G3365 Vigna mungo HOM05D006061 ORTHO05D007450 4.1e-63 246.9 321 47.7
MELO3C024149.2 Cucumis melo HOM05D006061 ORTHO05D007450 4.7e-59 233.4 280 50.4
Cpa.g.sc8.207 Carica papaya HOM05D006061 ORTHO05D007450 8.0e-59 232.6 278 48.2
unitig_8.g4624 Utricularia gibba HOM05D006061 ORTHO05D007450 1.0e-53 215.7 332 41.0
CARHR110700 Cardamine hirsuta HOM05D006061 ORTHO05D007450 9.4e-52 209.1 275 46.9
DCAR_004700 Daucus carota HOM05D000065 ORTHO05D007450 3.0e-50 204.1 424 34.9
Pp3c7_21970 Physcomitrium patens HOM05D006061 ORTHO05D007450 1.2e-49 202.2 579 29.5
SEGI_05721 Sequoiadendron giganteum HOM05D006061 ORTHO05D007450 7.7e-46 189.5 324 37.3
SMO356G0042 Selaginella moellendorffii HOM05D006061 ORTHO05D007450 1.8e-42 178.3 629 27.7
VMungo1383G3184 Vigna mungo HOM05D006061 ORTHO05D007450 3.0e-42 177.6 253 39.5
vmacro02728 Vaccinium macrocarpon HOM05D006061 ORTHO05D007450 7.0e-39 166.4 363 33.9
Lalb_Chr01g0019411 Lupinus albus HOM05D006061 ORTHO05D007450 1.3e-37 162.2 225 46.2
HPP92_014830 Vanilla planifolia HOM05D006061 ORTHO05D007450 2.3e-34 151.4 463 28.3
Zm00001eb133830 Zea mays HOM05D006061 ORTHO05D007450 3.0e-34 151.0 282 34.4
Oeu039641.2 Olea europaea HOM05D006061 ORTHO05D007450 7.0e-31 139.8 165 46.1
Cc00_g31740 Coffea canephora HOM05D006061 ORTHO05D007450 2.3e-29 134.8 152 53.9
Os12g0228900 Oryza sativa ssp. japonica HOM05D006061 ORTHO05D007450 4.9e-24 117.1 209 37.8
Phvul.004G074200 Phaseolus vulgaris HOM05D006061 ORTHO05D007450 6.4e-24 116.7 165 47.3
CBR_g31999 Chara braunii HOM05D006061 ORTHO05D007450 1.1e-20 105.9 553 25.3
Zm00001eb008990 Zea mays HOM05D006061 ORTHO05D007450 5.6e-20 103.6 135 45.2
Rhsim13G0055400 Rhododendron simsii HOM05D006061 ORTHO05D007450 1.2e-19 102.4 122 48.4
Zm00001eb428270 Zea mays HOM05D006061 ORTHO05D007450 2.8e-19 101.3 150 40.7
Zm00001eb120120 Zea mays HOM05D006061 ORTHO05D007450 1.2e-17 95.9 125 44.0
Gorai.008G101100 Gossypium raimondii HOM05D006061 ORTHO05D007450 2.2e-16 91.7 140 42.1
SHI26842 Sapria himalayana HOM05D006061 ORTHO05D007450 6.4e-16 90.1 136 45.6
Gohir.D10G064900 Gossypium hirsutum HOM05D006061 ORTHO05D007450 8.3e-16 89.7 142 42.3
Psat1g093320 Pisum sativum HOM05D006061 ORTHO05D007450 7.1e-15 86.7 153 33.3
PSO675G3076 Papaver somniferum HOM05D006061 ORTHO05D007450 6.0e-14 83.6 344 27.0
Psat0ss8385g0040 Pisum sativum HOM05D006061 ORTHO05D007450 1.0e-13 82.8 150 32.0
SHI26843 Sapria himalayana HOM05D006061 ORTHO05D007450 3.9e-13 80.9 194 32.5
CARHR174390 Cardamine hirsuta HOM05D006061 ORTHO05D007450 2.5e-12 78.2 101 45.5
Zm00001eb399320 Zea mays HOM05D000103 ORTHO05D007450 3.1e-10 71.2 102 42.2
RcHm_v2.0_Chr3g0485191 Rosa chinensis HOM05D006061 ORTHO05D007450 4.9e-08 63.9 56 50.0
CAN.G1642.4 Capsicum annuum HOM05D006061 ORTHO05D115332 6.4e-08 63.5 37 78.4
Zm00001eb068850 Zea mays HOM05D006061 ORTHO05D007450 8.4e-08 63.2 96 38.5
RcHm_v2.0_Chr6g0254781 Rosa chinensis HOM05D006061 ORTHO05D007450 2.4e-07 61.6 55 49.1
SHI26848 Sapria himalayana HOM05D006061 ORTHO05D007450 2.4e-07 61.6 92 40.2
RcHm_v2.0_Chr7g0210011 Rosa chinensis HOM05D006061 ORTHO05D007450 6.0e-06 57.0 39 59.0


User provided reference genes

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