Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0006202g0020 Nicotiana tabacum HOM05D007122 ORTHO05D008918 1.8e-148 529.3 275 100.0
CAN.G21.48 Capsicum annuum HOM05D007122 ORTHO05D008918 3.5e-131 471.9 273 89.4
Sopen08g022350 Solanum pennellii HOM05D007122 ORTHO05D008918 3.8e-130 468.4 273 88.6
Solyc08g068590.4 Solanum lycopersicum HOM05D007122 ORTHO05D008918 6.7e-127 457.6 270 87.4
PGSC0003DMG400029047 Solanum tuberosum HOM05D007122 ORTHO05D008918 8.2e-125 450.7 300 79.7
Peaxi162Scf00822g00313 Petunia axillaris HOM05D007122 ORTHO05D008918 5.3e-124 448.0 271 85.2
Nitab4.5_0000406g0060 Nicotiana tabacum HOM05D006934 ORTHO05D008743 2.3e-111 406.0 218 97.2
Cc02_g30330 Coffea canephora HOM05D007122 ORTHO05D008918 8.9e-95 350.9 264 68.9
TAR629G1569 Trochodendron aralioides HOM05D007122 ORTHO05D008918 2.4e-92 342.8 257 70.0
CiPaw.01G090900 Carya illinoinensis HOM05D007122 ORTHO05D008918 4.6e-91 338.6 257 68.9
TWI59G0863 Tripterygium wilfordii HOM05D007122 ORTHO05D008918 1.0e-90 337.4 277 66.4
GSVIVG01027487001 Vitis vinifera HOM05D007122 ORTHO05D008918 1.3e-90 337.0 261 67.0
QL05p084392 Quercus lobata HOM05D007122 ORTHO05D008918 3.9e-90 335.5 257 68.1
Nn1g00501 Nelumbo nucifera HOM05D007122 ORTHO05D008918 6.6e-90 334.7 242 72.7
AT2G46910 Arabidopsis thaliana HOM05D007122 ORTHO05D008918 8.6e-90 334.3 278 63.3
CANSAT01G1971 Cannabis sativa HOM05D007122 ORTHO05D008918 8.6e-90 334.3 247 68.8
EL10Ac5g10570 Beta vulgaris HOM05D007122 ORTHO05D008918 1.9e-89 333.2 222 76.6
Atru.chr5.816 Acer truncatum HOM05D007122 ORTHO05D008918 2.5e-89 332.8 224 75.4
Lj3g0016159 Lotus japonicus HOM05D007122 ORTHO05D008918 2.5e-89 332.8 234 71.8
MD17G1162500 Malus domestica HOM05D007122 ORTHO05D008918 3.3e-89 332.4 236 71.2
Carub.0004s2963 Capsella rubella HOM05D007122 ORTHO05D008918 4.3e-89 332.0 274 63.1
Prupe.3G022800 Prunus persica HOM05D007122 ORTHO05D008918 4.3e-89 332.0 241 72.2
MSTRG.12208 Avicennia marina HOM05D007122 ORTHO05D008918 5.6e-89 331.6 262 67.9
Thhalv10001577m.g Eutrema salsugineum HOM05D007122 ORTHO05D008918 7.3e-89 331.3 246 68.3
Sp4g28930 Schrenkiella parvula HOM05D007122 ORTHO05D008918 7.3e-89 331.3 246 68.7
AUR62028625 Chenopodium quinoa HOM05D007122 ORTHO05D008918 9.5e-89 330.9 222 76.1
MBI12_g33188_MAGBIO Magnolia biondii HOM05D007122 ORTHO05D008918 1.2e-88 330.5 225 73.3
PSO782G5442 Papaver somniferum HOM05D007122 ORTHO05D008918 1.6e-88 330.1 254 67.7
CARHR142260 Cardamine hirsuta HOM05D007122 ORTHO05D008918 3.6e-88 328.9 246 68.3
Lj9A610T61 Lonicera japonica HOM05D007122 ORTHO05D008918 3.6e-88 328.9 222 75.7
Aa31LG1G28270 Aethionema arabicum HOM05D007122 ORTHO05D008918 1.1e-87 327.4 238 70.6
A05p00930 Brassica napus HOM05D007122 ORTHO05D008918 1.1e-87 327.4 246 67.1
AUR62008050 Chenopodium quinoa HOM05D007122 ORTHO05D008918 1.8e-87 326.6 222 75.2
BcaC02g12634 Brassica carinata HOM05D007122 ORTHO05D008918 2.3e-87 326.2 234 70.1
Ca_20970_v3 Cicer arietinum L. HOM05D007122 ORTHO05D008918 2.3e-87 326.2 267 63.7
Oeu050289.1 Olea europaea HOM05D007122 ORTHO05D008918 4.0e-87 325.5 270 63.3
RcHm_v2.0_Chr2g0149531 Rosa chinensis HOM05D007122 ORTHO05D008918 5.2e-87 325.1 243 70.0
Hund02816 Selenicereus undatus HOM05D007122 ORTHO05D008918 5.2e-87 325.1 224 73.7
Medtr4g005390 Medicago truncatula HOM05D007122 ORTHO05D008918 6.8e-87 324.7 255 66.7
Cpa.g.sc57.60 Carica papaya HOM05D007122 ORTHO05D008918 2.0e-86 323.2 240 71.2
Potri.002G183700 Populus trichocarpa HOM05D007122 ORTHO05D008918 2.0e-86 323.2 263 65.4
Phvul.010G164100 Phaseolus vulgaris HOM05D007122 ORTHO05D008918 3.4e-86 322.4 232 70.3
Thecc.01G329100 Theobroma cacao HOM05D007122 ORTHO05D008918 4.4e-86 322.0 271 64.6
COL.COLO4_23084 Corchorus olitorius HOM05D007122 ORTHO05D008918 5.8e-86 321.6 224 73.2
FAN05G3936 Fragaria x ananassa HOM05D007122 ORTHO05D008918 5.8e-86 321.6 243 69.1
FAN14G1589 Fragaria x ananassa HOM05D007122 ORTHO05D008918 7.5e-86 321.2 243 68.7
Gohir.D11G107500 Gossypium hirsutum HOM05D007122 ORTHO05D008918 7.5e-86 321.2 224 72.3
Gorai.007G115100 Gossypium raimondii HOM05D007122 ORTHO05D008918 7.5e-86 321.2 229 71.2
BraA05t19094Z Brassica rapa HOM05D007122 ORTHO05D008918 9.8e-86 320.9 247 66.0
FvH4_6g36990 Fragaria vesca HOM05D007122 ORTHO05D008918 1.7e-85 320.1 243 68.7
THA.LOC104802109 Tarenaya hassleriana HOM05D007122 ORTHO05D008918 1.7e-85 320.1 281 63.7
TPR.G38811 Trifolium pratense HOM05D007122 ORTHO05D008918 1.7e-85 320.1 231 71.0
HPP92_007409 Vanilla planifolia HOM05D007122 ORTHO05D008918 1.7e-85 320.1 255 65.1
C04p01080 Brassica napus HOM05D006867 ORTHO05D008676 2.9e-85 319.3 235 69.8
Glyma.07G002100 Glycine max HOM05D007122 ORTHO05D008918 3.7e-85 318.9 224 71.4
Hma1.2p1_0074F.1_g038925 Hydrangea macrophylla HOM05D007122 ORTHO05D008918 4.9e-85 318.5 242 70.7
arahy.Tifrunner.gnm1.ann1.KLKB5C Arachis hypogaea HOM05D007122 ORTHO05D008918 1.9e-84 316.6 253 65.6
arahy.Tifrunner.gnm1.ann1.XK7RJX Arachis hypogaea HOM05D007122 ORTHO05D008918 5.4e-84 315.1 240 67.1
ECA234G3018 Erigeron canadensis HOM05D007122 ORTHO05D008918 1.2e-83 313.9 215 74.4
Eucgr.E00013 Eucalyptus grandis HOM05D007122 ORTHO05D008918 1.6e-83 313.5 221 71.5
ClCG07G014660 Citrullus lanatus HOM05D007122 ORTHO05D008918 2.7e-83 312.8 242 66.5
HanXRQChr16g0524441 Helianthus annuus HOM05D007122 ORTHO05D008918 2.7e-83 312.8 240 68.3
MELO3C026712.2 Cucumis melo HOM05D007122 ORTHO05D008918 3.5e-83 312.4 245 67.3
Actinidia33027 Actinidia chinensis HOM05D007122 ORTHO05D008918 7.8e-83 311.2 230 70.4
CsaV3_3G030490 Cucumis sativus L. HOM05D007122 ORTHO05D008918 7.8e-83 311.2 242 68.2
Ciclev10021604m.g Citrus clementina HOM05D007122 ORTHO05D008918 3.0e-82 309.3 263 64.3
Lalb_Chr04g0264851 Lupinus albus HOM05D007122 ORTHO05D008918 2.5e-81 306.2 221 68.8
ATR0579G047 Amborella trichopoda HOM05D007122 ORTHO05D008918 4.3e-81 305.4 266 59.4
vmacro08515 Vaccinium macrocarpon HOM05D007122 ORTHO05D008918 4.3e-81 305.4 237 68.8
CDE02G4652 Ceratophyllum demersum HOM05D007122 ORTHO05D008918 8.1e-80 301.2 243 65.4
unitig_0.g1006 Utricularia gibba HOM05D007122 ORTHO05D003998 6.8e-79 298.1 236 62.7
Zm00001eb220590 Zea mays HOM05D007122 ORTHO05D008918 2.9e-77 292.7 225 65.8
Os10g0509200 Oryza sativa ssp. japonica HOM05D007122 ORTHO05D008918 4.9e-77 292.0 267 58.8
Rhsim04G0175900 Rhododendron simsii HOM05D007122 ORTHO05D008918 1.1e-76 290.8 283 56.9
Sabra02G0131900 Salix brachista HOM05D007122 ORTHO05D008918 1.7e-74 283.5 351 49.0
Dinv25395 Davidia involucrata HOM05D007122 ORTHO05D008918 1.8e-71 273.5 252 60.3
PGR042G2951 Punica granatum HOM05D007122 ORTHO05D008918 7.6e-70 268.1 183 73.2
Sed0017612 Sechium edule HOM05D007122 ORTHO05D008918 7.6e-70 268.1 190 70.5
Lsat_1_v5_gn_4_31280 Lactuca sativa HOM05D007122 ORTHO05D008918 2.2e-69 266.5 217 65.4
VMungo0331G0463 Vigna mungo HOM05D000070 ORTHO05D003491 6.4e-69 265.0 229 60.3
Manes.01G237100 Manihot esculenta HOM05D007122 ORTHO05D008918 8.4e-69 264.6 223 61.4
Psat7g265240 Pisum sativum HOM05D007122 ORTHO05D008918 3.5e-67 259.2 200 64.0
Gohir.A11G103000 Gossypium hirsutum HOM05D007122 ORTHO05D008918 7.8e-67 258.1 182 73.1
Ah.11g050690 Amaranthus hybridus HOM05D007122 ORTHO05D008918 1.6e-64 250.4 258 54.3
SMO232G0083 Selaginella moellendorffii HOM05D007122 ORTHO05D008918 2.1e-64 250.0 240 55.4
Mapoly0069s0014 Marchantia polymorpha HOM05D007122 ORTHO05D008918 6.9e-63 245.0 247 53.4
SGA_v2.0_scaffold104G30244 Striga asiatica HOM05D007122 ORTHO05D008918 1.2e-62 244.2 269 51.3
Aqoxy5G04392 Aquilegia oxysepala HOM05D007122 ORTHO05D008918 1.7e-61 240.4 205 61.0
Dinv32665 Davidia involucrata HOM05D007122 ORTHO05D008918 7.6e-54 214.9 169 65.7
PSO063G7482 Papaver somniferum HOM05D007122 ORTHO05D008918 8.4e-53 211.5 143 74.1
Pp3c11_15290 Physcomitrium patens HOM05D007122 ORTHO05D008918 2.4e-52 209.9 203 53.2
Glyma.08G224600 Glycine max HOM05D007122 ORTHO05D008918 3.2e-52 209.5 152 67.8
Duzib133G0914 Durio zibethinus HOM05D007122 ORTHO05D008918 4.2e-52 209.1 184 58.2
Sc05g0001590 Simmondsia chinensis HOM05D007122 ORTHO05D008918 1.1e-47 194.5 157 63.1
Migut.N02127 Erythranthe guttata HOM05D007122 ORTHO05D008918 2.6e-46 189.9 141 66.0
Haze_16258 Corylus avellana HOM05D007122 ORTHO05D008918 1.0e-45 188.0 349 39.3
FAN02G0509 Fragaria x ananassa HOM05D007122 ORTHO05D008918 1.7e-45 187.2 199 53.8
Glyma.14G134000 Glycine max HOM05D007122 ORTHO05D008918 1.7e-45 187.2 151 62.3
QL05p083819 Quercus lobata HOM05D007122 ORTHO05D008918 9.0e-31 138.3 173 48.6
Pp3c2_10460 Physcomitrium patens HOM05D007122 ORTHO05D008918 1.0e-29 134.8 149 43.0
Cre01.g039550 Chlamydomonas reinhardtii HOM05D007122 ORTHO05D008918 5.5e-28 129.0 241 36.5
Zm00001eb094490 Zea mays HOM05D007122 ORTHO05D008918 9.4e-28 128.3 96 66.7
MCO07G119 Micromonas commoda HOM05D007122 ORTHO05D008918 3.7e-24 116.3 278 34.5
Psat7g265400 Pisum sativum HOM05D007122 ORTHO05D008918 6.3e-24 115.5 86 70.9
Hma1.2p1_0074F.1_g038930 Hydrangea macrophylla HOM05D007122 ORTHO05D008918 1.3e-16 91.3 60 78.3
SGA_v2.0_scaffold159G37569 Striga asiatica HOM05D007122 ORTHO05D008918 4.7e-11 72.8 111 38.7
FAN05G3242 Fragaria x ananassa HOM05D007122 ORTHO05D008918 1.4e-07 61.2 36 86.1
FAN14G0283 Fragaria x ananassa HOM05D007122 ORTHO05D008918 1.4e-07 61.2 36 86.1
Cre14.g618050 Chlamydomonas reinhardtii HOM05D006988 ORTHO05D008731 4.1e-07 59.7 128 31.2
FvH4_6g35960 Fragaria vesca HOM05D007122 ORTHO05D008918 7.0e-07 58.9 36 83.3
BraA07t28698Z Brassica rapa HOM05D006432 ORTHO05D008257 9.1e-07 58.5 226 27.9
BcaC06g35517 Brassica carinata HOM05D006432 ORTHO05D008257 1.2e-06 58.2 226 27.9
C07p14010 Brassica napus HOM05D006432 ORTHO05D008257 1.6e-06 57.8 226 27.9
BolC7t41898H Brassica oleracea HOM05D006432 ORTHO05D008257 1.6e-06 57.8 226 27.9
A07p09040 Brassica napus HOM05D006432 ORTHO05D008257 3.5e-06 56.6 226 27.9
SMO141G0176 Selaginella moellendorffii HOM05D006432 ORTHO05D008257 5.9e-06 55.8 244 27.0
ECA240G3223 Erigeron canadensis HOM05D002023 ORTHO05D002049 7.7e-06 55.5 209 25.8


User provided reference genes

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