Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0006196g0020 Nicotiana tabacum HOM05D002457 ORTHO05D005750 3.5e-157 558.1 260 100.0
Nitab4.5_0000786g0170 Nicotiana tabacum HOM05D002457 ORTHO05D005750 1.7e-148 529.3 260 95.0
Solyc04g074490.3 Solanum lycopersicum HOM05D002457 ORTHO05D005750 9.8e-128 460.3 260 82.3
Sopen04g029500 Solanum pennellii HOM05D002457 ORTHO05D005750 1.7e-127 459.5 260 81.9
CAN.G970.12 Capsicum annuum HOM05D002457 ORTHO05D005750 1.6e-125 453.0 260 80.8
Peaxi162Scf00030g01716 Petunia axillaris HOM05D002457 ORTHO05D005750 6.6e-124 447.6 261 80.8
Dinv19118 Davidia involucrata HOM05D002457 ORTHO05D005750 2.1e-90 336.3 273 60.8
CSS0003030 Camellia sinensis var. sinensis HOM05D002457 ORTHO05D005750 1.2e-85 320.5 273 56.0
GSVIVG01009071001 Vitis vinifera HOM05D002457 ORTHO05D005750 1.1e-83 313.9 271 56.1
Oeu054770.1 Olea europaea HOM05D002457 ORTHO05D005750 8.2e-82 307.8 265 57.0
Actinidia10339 Actinidia chinensis HOM05D002457 ORTHO05D005750 4.0e-81 305.4 270 55.6
MD08G1186800 Malus domestica HOM05D002457 ORTHO05D005750 5.3e-81 305.1 270 54.1
Haze_22295 Corylus avellana HOM05D002457 ORTHO05D005750 9.0e-81 304.3 266 56.4
TAR381G1374 Trochodendron aralioides HOM05D002457 ORTHO05D005750 2.6e-80 302.8 274 57.3
Dinv44797 Davidia involucrata HOM05D002457 ORTHO05D005750 4.5e-80 302.0 257 57.6
Ciclev10000161m.g Citrus clementina HOM05D002457 ORTHO05D005750 5.8e-80 301.6 267 52.8
MD15G1372700 Malus domestica HOM05D002457 ORTHO05D005750 1.7e-79 300.1 272 54.0
Prupe.1G521300 Prunus persica HOM05D002457 ORTHO05D005750 3.8e-79 298.9 269 53.9
Cfa013661 Carpinus fangiana HOM05D002457 ORTHO05D005750 1.1e-78 297.4 268 55.2
Sabra02G0078000 Salix brachista HOM05D002457 ORTHO05D005750 2.5e-78 296.2 285 51.6
Cc10_g06810 Coffea canephora HOM05D002457 ORTHO05D005750 1.2e-77 293.9 265 53.6
FvH4_5g36800 Fragaria vesca HOM05D002457 ORTHO05D005750 1.2e-77 293.9 272 53.3
Potri.002G099400 Populus trichocarpa HOM05D002457 ORTHO05D005750 1.2e-77 293.9 267 54.7
TPR.G14216 Trifolium pratense HOM05D002457 ORTHO05D005750 2.7e-77 292.7 268 53.7
CiPaw.07G177900 Carya illinoinensis HOM05D002457 ORTHO05D005750 6.0e-77 291.6 269 54.6
Manes.18G065400 Manihot esculenta HOM05D002457 ORTHO05D005750 7.9e-77 291.2 268 53.7
Nn1g05429 Nelumbo nucifera HOM05D002457 ORTHO05D005750 1.3e-76 290.4 273 53.8
RcHm_v2.0_Chr7g0243351 Rosa chinensis HOM05D002457 ORTHO05D005750 2.3e-76 289.7 270 52.6
Lj4C97T15 Lonicera japonica HOM05D002457 ORTHO05D005750 3.0e-76 289.3 271 53.9
QL12p037399 Quercus lobata HOM05D002457 ORTHO05D005750 3.0e-76 289.3 275 52.4
QL12p038698 Quercus lobata HOM05D002457 ORTHO05D005750 3.0e-76 289.3 275 52.4
Eucgr.F00367 Eucalyptus grandis HOM05D002457 ORTHO05D005750 3.9e-76 288.9 269 53.5
TWI12G1349 Tripterygium wilfordii HOM05D002457 ORTHO05D005750 3.9e-76 288.9 268 53.4
Aqoxy6G00731 Aquilegia oxysepala HOM05D002457 ORTHO05D005750 5.1e-76 288.5 272 54.0
vmacro21299 Vaccinium macrocarpon HOM05D002457 ORTHO05D005750 5.1e-76 288.5 269 52.4
Glyma.06G101600 Glycine max HOM05D002457 ORTHO05D005750 6.7e-76 288.1 268 51.1
vmacro21245 Vaccinium macrocarpon HOM05D002457 ORTHO05D005750 1.5e-75 287.0 269 52.0
Rhsim06G0078900 Rhododendron simsii HOM05D002457 ORTHO05D005750 1.9e-75 286.6 278 52.5
Atru.chr13.1133 Acer truncatum HOM05D002457 ORTHO05D005750 2.5e-75 286.2 268 52.2
SGA_v2.0_scaffold28G11909 Striga asiatica HOM05D002457 ORTHO05D005750 2.5e-75 286.2 270 54.1
RcHm_v2.0_Chr7g0243141 Rosa chinensis HOM05D002457 ORTHO05D005750 5.7e-75 285.0 268 52.6
Lj1g0014547 Lotus japonicus HOM05D002457 ORTHO05D005750 1.6e-74 283.5 268 51.9
COL.COLO4_12026 Corchorus olitorius HOM05D002457 ORTHO05D005750 3.7e-74 282.3 275 52.4
CANSAT54G2291 Cannabis sativa HOM05D002457 ORTHO05D005750 1.1e-73 280.8 271 51.3
Psat5g051160 Pisum sativum HOM05D002457 ORTHO05D005750 1.1e-73 280.8 268 50.7
MSTRG.22163 Avicennia marina HOM05D002457 ORTHO05D005750 1.4e-73 280.4 272 54.8
Phvul.009G032400 Phaseolus vulgaris HOM05D002457 ORTHO05D005750 1.4e-73 280.4 259 52.9
Lalb_Chr11g0065321 Lupinus albus HOM05D002457 ORTHO05D005750 3.1e-73 279.3 265 51.7
Medtr3g099370 Medicago truncatula HOM05D002457 ORTHO05D005750 3.1e-73 279.3 270 51.5
Hund26976 Selenicereus undatus HOM05D002457 ORTHO05D005750 2.6e-72 276.2 261 50.2
DCAR_019216 Daucus carota HOM05D002457 ORTHO05D005750 3.2e-70 269.2 275 51.6
PSO210G3704 Papaver somniferum HOM05D002457 ORTHO05D005750 3.2e-70 269.2 275 49.1
Thecc.08G103800 Theobroma cacao HOM05D002457 ORTHO05D005750 4.2e-70 268.9 272 52.2
Migut.N02884 Erythranthe guttata HOM05D002457 ORTHO05D005750 9.3e-70 267.7 271 52.4
Gorai.002G140900 Gossypium raimondii HOM05D002457 ORTHO05D005750 9.3e-70 267.7 272 49.3
PGR042G2032 Punica granatum HOM05D002457 ORTHO05D005750 1.2e-69 267.3 271 50.2
Gohir.D01G115200 Gossypium hirsutum HOM05D002457 ORTHO05D005750 1.6e-69 266.9 272 49.3
Gohir.A01G132300 Gossypium hirsutum HOM05D002457 ORTHO05D005750 3.6e-69 265.8 272 49.3
PSO447G0244 Papaver somniferum HOM05D002457 ORTHO05D005750 4.6e-69 265.4 275 48.0
EL10Ac1g01165 Beta vulgaris HOM05D002457 ORTHO05D005750 7.9e-69 264.6 258 51.2
SalBow8G1618 Salvia bowleyana HOM05D002457 ORTHO05D005750 1.3e-68 263.8 267 51.7
arahy.Tifrunner.gnm1.ann1.Y876JP Arachis hypogaea HOM05D002457 ORTHO05D005750 8.7e-68 261.2 289 46.0
FAN18G1557 Fragaria x ananassa HOM05D002457 ORTHO05D005750 1.5e-67 260.4 328 43.6
MELO3C011038.2 Cucumis melo HOM05D002457 ORTHO05D005750 2.5e-67 259.6 266 47.4
arahy.Tifrunner.gnm1.ann1.H9D2WH Arachis hypogaea HOM05D002457 ORTHO05D005750 3.3e-67 259.2 287 46.0
Ah.05g169750 Amaranthus hybridus HOM05D002457 ORTHO05D005750 7.4e-67 258.1 272 46.0
FAN08G0375 Fragaria x ananassa HOM05D002457 ORTHO05D005750 1.7e-66 256.9 326 43.3
ClCG08G011220 Citrullus lanatus HOM05D002457 ORTHO05D005750 1.1e-65 254.2 266 46.2
THA.LOC104810709 Tarenaya hassleriana HOM05D002457 ORTHO05D005750 1.4e-65 253.8 273 48.7
unitig_8.g3608 Utricularia gibba HOM05D002457 ORTHO05D005750 3.1e-65 252.7 261 46.7
SGA_v2.0_scaffold84G26485 Striga asiatica HOM05D002457 ORTHO05D005750 9.1e-65 251.1 285 47.0
CsaV3_2G029800 Cucumis sativus L. HOM05D002457 ORTHO05D005750 1.2e-64 250.8 266 47.0
FAN13G1549 Fragaria x ananassa HOM05D002457 ORTHO05D005750 1.2e-64 250.8 322 43.2
ATR0782G122 Amborella trichopoda HOM05D002457 ORTHO05D005750 2.2e-63 246.5 289 45.3
AUR62018953 Chenopodium quinoa HOM05D002457 ORTHO05D005750 2.5e-62 243.0 258 46.5
AUR62027799 Chenopodium quinoa HOM05D002457 ORTHO05D005750 2.5e-62 243.0 258 46.5
BcaB05g25129 Brassica carinata HOM05D002457 ORTHO05D005750 1.2e-61 240.7 270 49.6
Sp5g33400 Schrenkiella parvula HOM05D002457 ORTHO05D005750 1.6e-61 240.4 274 47.4
HanXRQChr09g0250381 Helianthus annuus HOM05D002457 ORTHO05D005750 2.1e-61 240.0 266 45.1
Aa31LG4G8280 Aethionema arabicum HOM05D002457 ORTHO05D005750 2.7e-61 239.6 267 46.8
AT1G78280 Arabidopsis thaliana HOM05D002457 ORTHO05D005750 2.7e-61 239.6 272 47.8
Carub.0002s2518 Capsella rubella HOM05D002457 ORTHO05D005750 3.6e-61 239.2 273 46.2
Thhalv10018079m.g Eutrema salsugineum HOM05D002457 ORTHO05D005750 6.1e-61 238.4 274 46.7
BolC6t40246H Brassica oleracea HOM05D002457 ORTHO05D005750 7.9e-61 238.0 267 47.6
BcaB03g16003 Brassica carinata HOM05D002457 ORTHO05D005750 1.0e-60 237.7 267 46.8
C06p52240 Brassica napus HOM05D002457 ORTHO05D005750 1.4e-60 237.3 267 47.6
BcaC08g47405 Brassica carinata HOM05D002457 ORTHO05D005750 2.3e-60 236.5 267 47.2
CDE03G0287 Ceratophyllum demersum HOM05D002457 ORTHO05D005750 2.3e-60 236.5 229 55.0
A07p43570 Brassica napus HOM05D002457 ORTHO05D005750 6.7e-60 235.0 267 47.2
BraA07t31869Z Brassica rapa HOM05D002457 ORTHO05D005750 6.7e-60 235.0 267 47.2
Gohir.A05G224700 Gossypium hirsutum HOM05D002457 ORTHO05D005750 8.8e-60 234.6 268 46.6
Gohir.D05G227200 Gossypium hirsutum HOM05D002457 ORTHO05D005750 8.8e-60 234.6 268 46.3
Gorai.009G234900 Gossypium raimondii HOM05D002457 ORTHO05D005750 1.1e-59 234.2 268 46.3
HPP92_011199 Vanilla planifolia HOM05D002457 ORTHO05D005750 2.6e-59 233.0 224 52.2
FAN04G0153 Fragaria x ananassa HOM05D002457 ORTHO05D005750 3.3e-59 232.6 326 41.1
Lsat_1_v5_gn_9_72780 Lactuca sativa HOM05D002457 ORTHO05D005750 4.4e-59 232.3 264 45.8
CARHR071750 Cardamine hirsuta HOM05D002457 ORTHO05D005750 7.4e-59 231.5 271 47.6
HPP92_011193 Vanilla planifolia HOM05D002457 ORTHO05D005750 8.2e-58 228.0 283 45.6
Os03g0389900 Oryza sativa ssp. japonica HOM05D002457 ORTHO05D005750 3.8e-55 219.2 272 43.8
Zm00001eb018970 Zea mays HOM05D002457 ORTHO05D005750 5.0e-55 218.8 270 43.7
C02p35500 Brassica napus HOM05D002457 ORTHO05D005750 7.2e-54 214.9 274 42.7
RcHm_v2.0_Chr7g0243001 Rosa chinensis HOM05D002457 ORTHO05D005750 7.2e-54 214.9 206 52.4
Cpa.g.sc36.164 Carica papaya HOM05D002457 ORTHO05D005750 1.5e-51 207.2 231 49.4
ECA232G3235 Erigeron canadensis HOM05D002457 ORTHO05D005750 2.0e-51 206.8 240 45.0
Cpa.g.sc36.165 Carica papaya HOM05D002457 ORTHO05D005750 2.6e-51 206.5 163 60.1
BcaC03g15804 Brassica carinata HOM05D002457 ORTHO05D005750 2.6e-48 196.4 261 41.8
AL2G38630 Arabidopsis lyrata HOM05D002457 ORTHO05D005750 1.7e-47 193.7 274 42.0
Sed0005289 Sechium edule HOM05D002457 ORTHO05D005750 3.6e-45 186.0 220 44.5
SEGI_24064 Sequoiadendron giganteum HOM05D002457 ORTHO05D005750 2.3e-44 183.3 217 46.1
MBI02_g27963_MAGBIO Magnolia biondii HOM05D002457 ORTHO05D005750 9.1e-41 171.4 132 62.1
BolC2t09568H Brassica oleracea HOM05D002457 ORTHO05D005750 2.5e-38 163.3 226 40.7
Sc23g0000320 Simmondsia chinensis HOM05D002457 ORTHO05D005750 6.3e-34 148.7 167 46.1
Ca_16043_v3 Cicer arietinum L. HOM05D002457 ORTHO05D005750 3.1e-33 146.4 173 42.8
SMO351G0300 Selaginella moellendorffii HOM05D002457 ORTHO05D005750 3.1e-33 146.4 220 35.9
Pp3c7_15150 Physcomitrium patens HOM05D002457 ORTHO05D005750 3.5e-32 142.9 242 33.1
Pp3c11_17580 Physcomitrium patens HOM05D002457 ORTHO05D005750 1.5e-30 137.5 224 32.6
AagrBONN_evm.TU.Sc2ySwM_228.4998 Anthoceros agrestis HOM05D002457 ORTHO05D005750 3.3e-30 136.3 268 33.6
Mapoly0027s0020 Marchantia polymorpha HOM05D002457 ORTHO05D005750 2.1e-29 133.7 234 34.2
A02p22110 Brassica napus HOM05D002457 ORTHO05D005750 2.1e-21 107.1 154 40.9
PGSC0003DMG400030813 Solanum tuberosum HOM05D002457 ORTHO05D005750 3.4e-19 99.8 62 74.2
Ca_14149_v3 Cicer arietinum L. HOM05D000298 ORTHO05D000553 3.7e-18 96.3 107 45.8
HPP92_011163 Vanilla planifolia HOM05D002457 ORTHO05D005750 4.1e-17 92.8 133 40.6
Glyma.04G100002 Glycine max HOM05D002457 ORTHO05D005750 3.5e-16 89.7 88 47.7
RcHm_v2.0_Chr7g0242991 Rosa chinensis HOM05D002457 ORTHO05D005750 4.7e-13 79.3 43 72.1
RcHm_v2.0_Chr7g0242931 Rosa chinensis HOM05D002457 ORTHO05D005750 8.9e-12 75.1 72 45.8


User provided reference genes

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