Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0006193g0010 Nicotiana tabacum HOM05D008155 ORTHO05D010411 8.4e-40 166.8 97 100.0
PGSC0003DMG400018233 Solanum tuberosum HOM05D008155 ORTHO05D010411 9.0e-18 93.6 54 83.3
Sopen01g044900 Solanum pennellii HOM05D008155 ORTHO05D010411 5.8e-17 90.9 54 81.5
Solyc01g102460.4 Solanum lycopersicum HOM05D008155 ORTHO05D010411 1.4e-15 86.3 54 79.6
CANSAT54G1408 Cannabis sativa HOM05D008155 ORTHO05D010411 1.6e-11 72.8 42 76.2
Migut.N00987 Erythranthe guttata HOM05D008155 ORTHO05D010411 2.2e-11 72.4 40 82.5
CSS0018964 Camellia sinensis var. sinensis HOM05D008155 ORTHO05D010411 1.8e-10 69.3 56 62.5
Manes.09G182600 Manihot esculenta HOM05D008155 ORTHO05D010411 2.4e-10 68.9 51 60.8
RcHm_v2.0_Chr3g0459031 Rosa chinensis HOM05D008155 ORTHO05D010411 9.0e-10 67.0 47 66.0
MD04G1183800 Malus domestica HOM05D008155 ORTHO05D010411 2.0e-09 65.9 40 67.5
MSTRG.5176 Avicennia marina HOM05D008155 ORTHO05D010411 2.6e-09 65.5 56 60.7
SalBow4G1718 Salvia bowleyana HOM05D008155 ORTHO05D010411 2.6e-09 65.5 40 72.5
SalBow4G2153 Salvia bowleyana HOM05D008155 ORTHO05D010411 2.6e-09 65.5 40 72.5
SalBow8G5556 Salvia bowleyana HOM05D008155 ORTHO05D010411 2.6e-09 65.5 40 72.5
CSS0011875 Camellia sinensis var. sinensis HOM05D008155 ORTHO05D010411 4.5e-09 64.7 44 65.9
Cfa004403 Carpinus fangiana HOM05D008155 ORTHO05D010411 7.6e-09 63.9 41 75.6
Prupe.6G302400 Prunus persica HOM05D008155 ORTHO05D010411 7.6e-09 63.9 36 75.0
vmacro19804 Vaccinium macrocarpon HOM05D003050 ORTHO05D003513 1.0e-08 63.5 36 77.8
QL03p011396 Quercus lobata HOM05D008155 ORTHO05D010411 1.3e-08 63.2 56 57.1
Rhsim11G0107200 Rhododendron simsii HOM05D008155 ORTHO05D010411 1.7e-08 62.8 40 65.0
Gorai.013G241100 Gossypium raimondii HOM05D008155 ORTHO05D010411 2.9e-08 62.0 38 68.4
Manes.08G106200 Manihot esculenta HOM05D008155 ORTHO05D010411 2.9e-08 62.0 40 67.5
VMungo1383G2435 Vigna mungo HOM05D008155 ORTHO05D010411 2.9e-08 62.0 40 67.5
Ciclev10029557m.g Citrus clementina HOM05D008155 ORTHO05D010411 3.8e-08 61.6 40 67.5
MD12G1197100 Malus domestica HOM05D008155 ORTHO05D010411 6.5e-08 60.8 41 63.4
Oeu034763.2 Olea europaea HOM05D008155 ORTHO05D010411 6.5e-08 60.8 40 70.0
Gohir.A13G206400 Gossypium hirsutum HOM05D008155 ORTHO05D010411 8.5e-08 60.5 38 65.8
Haze_15003 Corylus avellana HOM05D008155 ORTHO05D010411 1.1e-07 60.1 41 73.2
Glyma.03G227200 Glycine max HOM05D008155 ORTHO05D010411 1.1e-07 60.1 37 67.6
Potri.013G000200 Populus trichocarpa HOM05D008155 ORTHO05D010411 1.1e-07 60.1 34 73.5
TAR362G0658 Trochodendron aralioides HOM05D008155 ORTHO05D010411 1.1e-07 60.1 42 61.9
Phvul.001G221000 Phaseolus vulgaris HOM05D008155 ORTHO05D010411 1.4e-07 59.7 40 65.0
FAN14G4286 Fragaria x ananassa HOM05D008155 ORTHO05D010411 1.9e-07 59.3 46 60.9
arahy.Tifrunner.gnm1.ann1.QRZ24D Arachis hypogaea HOM05D008155 ORTHO05D010411 3.2e-07 58.5 43 60.5
FAN02G1576 Fragaria x ananassa HOM05D008155 ORTHO05D010411 3.2e-07 58.5 46 60.9
Glyma.19G224100 Glycine max HOM05D008155 ORTHO05D010411 5.5e-07 57.8 63 52.4
Thecc.05G331400 Theobroma cacao HOM05D008155 ORTHO05D010411 7.2e-07 57.4 38 63.2
TPR.G35721 Trifolium pratense HOM05D008155 ORTHO05D010411 7.2e-07 57.4 35 62.9
Cpa.g.sc48.233 Carica papaya HOM05D008155 ORTHO05D010411 9.3e-07 57.0 37 64.9
Aqoxy7G02124 Aquilegia oxysepala HOM05D008155 ORTHO05D010411 1.2e-06 56.6 41 58.5
Potri.005G001100 Populus trichocarpa HOM05D008155 ORTHO05D010411 1.2e-06 56.6 34 64.7
DCAR_022333 Daucus carota HOM05D008155 ORTHO05D010411 1.6e-06 56.2 32 68.8
TAR365G0599 Trochodendron aralioides HOM05D008155 ORTHO05D010411 1.6e-06 56.2 42 54.8
Sed0023159 Sechium edule HOM05D008155 ORTHO05D010411 2.1e-06 55.8 39 66.7
MELO3C004141.2 Cucumis melo HOM05D008155 ORTHO05D010411 3.6e-06 55.1 39 66.7
Medtr7g111230 Medicago truncatula HOM05D008155 ORTHO05D010411 4.6e-06 54.7 35 62.9
ClCG02G014570 Citrullus lanatus HOM05D008155 ORTHO05D010411 6.1e-06 54.3 37 67.6
unitig_699.g19831 Utricularia gibba HOM05D008155 ORTHO05D010411 6.1e-06 54.3 37 67.6


User provided reference genes

Program Settings