Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0006187g0010 Nicotiana tabacum HOM05D004884 ORTHO05D005873 2.2e-70 268.9 134 100.0
Solyc11g008330.3 Solanum lycopersicum HOM05D004884 ORTHO05D005873 3.8e-59 231.5 129 89.1
Glyma.15G008700 Glycine max HOM05D004884 ORTHO05D005873 1.0e-56 223.4 130 83.8
Prupe.3G084300 Prunus persica HOM05D004884 ORTHO05D005873 1.0e-56 223.4 130 82.3
Glyma.08G211500 Glycine max HOM05D004884 ORTHO05D005873 2.3e-56 222.2 130 82.3
PGR031G3479 Punica granatum HOM05D004884 ORTHO05D005873 3.0e-56 221.9 130 81.5
VMungo0331G0880 Vigna mungo HOM05D004884 ORTHO05D005873 3.0e-56 221.9 130 82.3
CAN.G407.94 Capsicum annuum HOM05D004884 ORTHO05D005873 5.2e-56 221.1 130 81.5
MD17G1208900 Malus domestica HOM05D004884 ORTHO05D005873 5.2e-56 221.1 130 80.8
QL05p029075 Quercus lobata HOM05D004884 ORTHO05D005873 5.2e-56 221.1 128 82.0
Phvul.010G154800 Phaseolus vulgaris HOM05D004884 ORTHO05D005873 6.8e-56 220.7 130 81.5
Dinv30589 Davidia involucrata HOM05D004884 ORTHO05D005873 3.4e-55 218.4 130 79.2
Glyma.07G031300 Glycine max HOM05D004884 ORTHO05D005873 3.4e-55 218.4 130 81.5
Eucgr.F02527 Eucalyptus grandis HOM05D004884 ORTHO05D005873 4.4e-55 218.0 130 79.2
THA.LOC104808231 Tarenaya hassleriana HOM05D004884 ORTHO05D005873 4.4e-55 218.0 130 79.2
Lsat_1_v5_gn_1_2440 Lactuca sativa HOM05D004884 ORTHO05D005873 5.7e-55 217.6 130 78.5
RcHm_v2.0_Chr2g0135941 Rosa chinensis HOM05D004884 ORTHO05D005873 5.7e-55 217.6 130 78.5
Lalb_Chr22g0350881 Lupinus albus HOM05D004884 ORTHO05D005873 7.5e-55 217.2 130 80.0
Psat5g301920 Pisum sativum HOM05D004884 ORTHO05D005873 7.5e-55 217.2 130 80.8
Solyc03g116600.3 Solanum lycopersicum HOM05D004884 ORTHO05D005873 7.5e-55 217.2 130 80.0
Sopen03g035510 Solanum pennellii HOM05D004884 ORTHO05D005873 7.5e-55 217.2 130 80.0
FvH4_6g29940 Fragaria vesca HOM05D004884 ORTHO05D005873 9.8e-55 216.9 130 80.0
FAN14G1538 Fragaria x ananassa HOM05D004884 ORTHO05D005873 9.8e-55 216.9 130 80.0
Hma1.2p1_0515F.1_g170110 Hydrangea macrophylla HOM05D004884 ORTHO05D005873 1.3e-54 216.5 130 78.5
Lj3g0000080 Lotus japonicus HOM05D004884 ORTHO05D005873 1.3e-54 216.5 130 80.0
THA.LOC104812503 Tarenaya hassleriana HOM05D004884 ORTHO05D005873 1.3e-54 216.5 130 76.9
Actinidia18100 Actinidia chinensis HOM05D004884 ORTHO05D005873 1.7e-54 216.1 130 77.7
HanXRQChr02g0046821 Helianthus annuus HOM05D004884 ORTHO05D005873 2.2e-54 215.7 130 77.7
Lalb_Chr04g0262431 Lupinus albus HOM05D004884 ORTHO05D005873 2.2e-54 215.7 130 79.2
Rhsim10G0061400 Rhododendron simsii HOM05D004884 ORTHO05D005873 2.2e-54 215.7 130 77.7
GSVIVG01017313001 Vitis vinifera HOM05D004884 ORTHO05D005873 2.2e-54 215.7 130 79.2
FAN09G2574 Fragaria x ananassa HOM05D004884 ORTHO05D005873 2.8e-54 215.3 130 79.2
ECA240G3509 Erigeron canadensis HOM05D004884 ORTHO05D005873 3.7e-54 214.9 130 77.7
AL1G27470 Arabidopsis lyrata HOM05D004884 ORTHO05D005873 4.8e-54 214.5 130 76.9
AT1G15370 Arabidopsis thaliana HOM05D004884 ORTHO05D005873 4.8e-54 214.5 130 76.9
ECA247G2927 Erigeron canadensis HOM05D001354 ORTHO05D002582 4.8e-54 214.5 130 77.7
Solyc06g068080.4 Solanum lycopersicum HOM05D004884 ORTHO05D005873 4.8e-54 214.5 130 80.0
Sopen06g025360 Solanum pennellii HOM05D004884 ORTHO05D005873 4.8e-54 214.5 130 80.0
PGSC0003DMG400000635 Solanum tuberosum HOM05D004884 ORTHO05D005873 4.8e-54 214.5 130 77.7
PGSC0003DMG400028511 Solanum tuberosum HOM05D004884 ORTHO05D005873 4.8e-54 214.5 130 80.0
CSS0003587 Camellia sinensis var. sinensis HOM05D004884 ORTHO05D005873 6.3e-54 214.2 130 78.5
FAN02G1988 Fragaria x ananassa HOM05D004884 ORTHO05D005873 6.3e-54 214.2 130 79.2
Manes.04G114100 Manihot esculenta HOM05D004884 ORTHO05D005873 6.3e-54 214.2 130 79.2
Oeu045160.1 Olea europaea HOM05D004884 ORTHO05D005873 6.3e-54 214.2 130 79.2
PSO455G0277 Papaver somniferum HOM05D004884 ORTHO05D005873 6.3e-54 214.2 130 79.2
Aa31LG4G430 Aethionema arabicum HOM05D004884 ORTHO05D005873 8.3e-54 213.8 130 76.2
MSTRG.9432 Avicennia marina HOM05D004884 ORTHO05D005873 1.1e-53 213.4 130 78.5
Medtr2g103690 Medicago truncatula HOM05D004884 ORTHO05D005873 1.1e-53 213.4 130 78.5
CAN.G321.60 Capsicum annuum HOM05D004884 ORTHO05D005873 1.4e-53 213.0 121 88.4
CARHR015900 Cardamine hirsuta HOM05D004884 ORTHO05D005873 1.4e-53 213.0 130 76.2
Atru.chr1.2995 Acer truncatum HOM05D004884 ORTHO05D005873 1.8e-53 212.6 130 79.2
Carub.0001s1514 Capsella rubella HOM05D004884 ORTHO05D005873 1.8e-53 212.6 128 76.6
Ciclev10026708m.g Citrus clementina HOM05D004884 ORTHO05D005873 1.8e-53 212.6 130 80.0
vmacro20098 Vaccinium macrocarpon HOM05D004884 ORTHO05D005873 2.4e-53 212.2 130 76.9
COL.COLO4_12946 Corchorus olitorius HOM05D004884 ORTHO05D005873 3.1e-53 211.8 130 77.7
Oeu052257.1 Olea europaea HOM05D004884 ORTHO05D005873 3.1e-53 211.8 130 77.7
SGA_v2.0_scaffold117G32369 Striga asiatica HOM05D004884 ORTHO05D005873 4.1e-53 211.5 130 77.7
CiPaw.08G011500 Carya illinoinensis HOM05D004884 ORTHO05D005873 7.0e-53 210.7 128 75.8
Cc04_g04240 Coffea canephora HOM05D004884 ORTHO05D005873 7.0e-53 210.7 130 76.9
SalBow3G1656 Salvia bowleyana HOM05D004884 ORTHO05D005873 7.0e-53 210.7 130 76.9
Aqoxy1G02408 Aquilegia oxysepala HOM05D004884 ORTHO05D005873 9.1e-53 210.3 130 76.2
ClCG05G016940 Citrullus lanatus HOM05D004884 ORTHO05D005873 9.1e-53 210.3 130 76.9
MELO3C003694.2 Cucumis melo HOM05D004884 ORTHO05D005873 9.1e-53 210.3 130 76.9
Thecc.06G021400 Theobroma cacao HOM05D004884 ORTHO05D005873 9.1e-53 210.3 130 76.9
Migut.D01065 Erythranthe guttata HOM05D004884 ORTHO05D005873 1.2e-52 209.9 130 76.2
CDE04G3015 Ceratophyllum demersum HOM05D004884 ORTHO05D005873 1.6e-52 209.5 128 77.3
PSO170G2441 Papaver somniferum HOM05D004884 ORTHO05D005873 1.6e-52 209.5 130 76.9
Potri.001G193100 Populus trichocarpa HOM05D004884 ORTHO05D005873 1.6e-52 209.5 130 75.4
QL02p021869 Quercus lobata HOM05D004884 ORTHO05D005873 1.6e-52 209.5 128 75.8
Sabra01G0135700 Salix brachista HOM05D004884 ORTHO05D005873 1.6e-52 209.5 130 75.4
Sp1g13700 Schrenkiella parvula HOM05D004884 ORTHO05D005873 1.6e-52 209.5 130 76.2
BcaB03g14545 Brassica carinata HOM05D004884 ORTHO05D005873 2.0e-52 209.1 130 76.2
BcaC05g25475 Brassica carinata HOM05D004884 ORTHO05D005873 2.0e-52 209.1 130 76.2
BcaC05g25490 Brassica carinata HOM05D004884 ORTHO05D005873 2.0e-52 209.1 130 76.2
A06p11400 Brassica napus HOM05D004884 ORTHO05D005873 2.0e-52 209.1 130 76.2
A09p61460 Brassica napus HOM05D004884 ORTHO05D005873 2.0e-52 209.1 130 76.2
C05p13510 Brassica napus HOM05D004884 ORTHO05D005873 2.0e-52 209.1 130 76.2
C08p45030 Brassica napus HOM05D004884 ORTHO05D005873 2.0e-52 209.1 130 76.2
BolC5t30088H Brassica oleracea HOM05D004884 ORTHO05D005873 2.0e-52 209.1 130 76.2
BraA06t24317Z Brassica rapa HOM05D004884 ORTHO05D005873 2.0e-52 209.1 130 76.2
BraA09t41517Z Brassica rapa HOM05D004884 ORTHO05D005873 2.0e-52 209.1 130 76.2
CSS0011163 Camellia sinensis var. sinensis HOM05D004884 ORTHO05D005873 2.0e-52 209.1 130 75.4
CsaV3_3G046450 Cucumis sativus L. HOM05D004884 ORTHO05D005873 2.0e-52 209.1 130 76.9
Thhalv10009024m.g Eutrema salsugineum HOM05D004884 ORTHO05D005873 2.0e-52 209.1 130 76.2
Cfa013154 Carpinus fangiana HOM05D004884 ORTHO05D005873 2.7e-52 208.8 130 75.4
Peaxi162Scf00207g00728 Petunia axillaris HOM05D004884 ORTHO05D005873 2.7e-52 208.8 130 78.5
MBI04_g07835_MAGBIO Magnolia biondii HOM05D004884 ORTHO05D005873 5.9e-52 207.6 130 76.9
BcaC07g41506 Brassica carinata HOM05D004884 ORTHO05D005873 7.7e-52 207.2 130 75.4
BolC8t52049H Brassica oleracea HOM05D004884 ORTHO05D005873 7.7e-52 207.2 130 75.4
AUR62012381 Chenopodium quinoa HOM05D004884 ORTHO05D005873 7.7e-52 207.2 130 73.8
Duzib235G0621 Durio zibethinus HOM05D004884 ORTHO05D005873 1.0e-51 206.8 130 76.2
Nn2g12037 Nelumbo nucifera HOM05D004884 ORTHO05D005873 1.3e-51 206.5 130 73.8
Sed0027624 Sechium edule HOM05D004884 ORTHO05D005873 1.3e-51 206.5 130 76.2
FAN05G0038 Fragaria x ananassa HOM05D004884 ORTHO05D005873 1.7e-51 206.1 150 69.3
Gohir.D10G076700 Gossypium hirsutum HOM05D004884 ORTHO05D005873 1.7e-51 206.1 130 76.2
Thhalv10019295m.g Eutrema salsugineum HOM05D004884 ORTHO05D005873 6.5e-51 204.1 128 73.4
unitig_747.g21296 Utricularia gibba HOM05D004884 ORTHO05D005873 6.5e-51 204.1 126 73.0
Gohir.D06G099800 Gossypium hirsutum HOM05D004884 ORTHO05D005873 1.5e-50 203.0 126 74.6
ATR1120G077 Amborella trichopoda HOM05D004884 ORTHO05D005873 1.9e-50 202.6 130 71.5
TAR636G0424 Trochodendron aralioides HOM05D004884 ORTHO05D005873 1.9e-50 202.6 130 73.8
Gorai.010G114700 Gossypium raimondii HOM05D004884 ORTHO05D005873 3.2e-50 201.8 126 73.8
TWI75G0638 Tripterygium wilfordii HOM05D004884 ORTHO05D005873 4.2e-50 201.4 130 72.3
Gohir.A10G074700 Gossypium hirsutum HOM05D004884 ORTHO05D005873 7.2e-50 200.7 130 74.6
Nitab4.5_0013106g0010 Nicotiana tabacum HOM05D004884 ORTHO05D005873 7.2e-50 200.7 121 78.5
Zm00001eb064920 Zea mays HOM05D004884 ORTHO05D005873 1.2e-49 199.9 128 73.4
Peaxi162Scf00145g01210 Petunia axillaris HOM05D004884 ORTHO05D005873 4.7e-49 198.0 104 94.2
EL10Ac2g04219 Beta vulgaris HOM05D004884 ORTHO05D005873 1.4e-48 196.4 140 68.6
Sed0022166 Sechium edule HOM05D004884 ORTHO05D005873 1.8e-48 196.1 122 74.6
TWI34G0752 Tripterygium wilfordii HOM05D004884 ORTHO05D005873 4.0e-48 194.9 130 70.8
Peaxi162Scf00332g00767 Petunia axillaris HOM05D004884 ORTHO05D005873 8.8e-48 193.7 130 75.4
Actinidia36285 Actinidia chinensis HOM05D004884 ORTHO05D005873 1.2e-44 183.3 104 80.8
arahy.Tifrunner.gnm1.ann1.Q10AU9 Arachis hypogaea HOM05D004884 ORTHO05D005873 4.5e-44 181.4 104 81.7
arahy.Tifrunner.gnm1.ann1.W4DERE Arachis hypogaea HOM05D004884 ORTHO05D005873 4.5e-44 181.4 104 81.7
AUR62031521 Chenopodium quinoa HOM05D004884 ORTHO05D005873 5.9e-44 181.0 180 52.8
AUR62012868 Chenopodium quinoa HOM05D004884 ORTHO05D005873 7.7e-44 180.6 128 67.2
EL10Ac9g22900 Beta vulgaris HOM05D004884 ORTHO05D005873 5.0e-43 177.9 130 66.9
Nitab4.5_0001764g0110 Nicotiana tabacum HOM05D004884 ORTHO05D005873 6.6e-43 177.6 104 79.8
Dinv38109 Davidia involucrata HOM05D000250 ORTHO05D002477 1.1e-42 176.8 104 78.8
SMO143G0054 Selaginella moellendorffii HOM05D004884 ORTHO05D005873 1.5e-42 176.4 128 64.8
Sc23g0006790 Simmondsia chinensis HOM05D004884 ORTHO05D005873 3.3e-42 175.3 104 77.9
SalBow6G6988 Salvia bowleyana HOM05D004884 ORTHO05D005873 1.2e-41 173.3 104 77.9
Potri.006G253700 Populus trichocarpa HOM05D004884 ORTHO05D005873 1.6e-41 172.9 116 68.1
Pp3c18_11860 Physcomitrium patens HOM05D004884 ORTHO05D005873 2.8e-41 172.2 128 62.5
Sopen11g004140 Solanum pennellii HOM05D004884 ORTHO05D005873 3.6e-41 171.8 104 81.7
Gorai.011G082800 Gossypium raimondii HOM05D004884 ORTHO05D005873 2.3e-40 169.1 104 76.0
AagrBONN_evm.TU.Sc2ySwM_368.2705 Anthoceros agrestis HOM05D004884 ORTHO05D005873 4.4e-39 164.9 127 61.4
Sabra06G0198100 Salix brachista HOM05D004884 ORTHO05D005873 1.3e-38 163.3 104 72.1
Mapoly0005s0226 Marchantia polymorpha HOM05D004884 ORTHO05D005873 8.3e-38 160.6 128 57.8
CDE06G1547 Ceratophyllum demersum HOM05D004884 ORTHO05D005873 1.1e-34 150.2 100 70.0
QL05p029040 Quercus lobata HOM05D004884 ORTHO05D005873 1.5e-34 149.8 109 68.8
Nitab4.5_0005235g0010 Nicotiana tabacum HOM05D004884 ORTHO05D005873 2.3e-32 142.5 118 60.2
Gorai.001G184900 Gossypium raimondii HOM05D004884 ORTHO05D005873 1.5e-31 139.8 102 65.7
Haze_21525 Corylus avellana HOM05D004884 ORTHO05D005873 4.4e-31 138.3 172 46.5
Gohir.D07G161600 Gossypium hirsutum HOM05D004884 ORTHO05D005873 2.2e-30 136.0 102 64.7
Nitab4.5_0001450g0150 Nicotiana tabacum HOM05D004884 ORTHO05D005873 8.3e-30 134.0 87 78.2
CBR_g8585 Chara braunii HOM05D004884 ORTHO05D005873 4.6e-28 128.3 125 52.0
Gohir.D13G076450 Gossypium hirsutum HOM05D004884 ORTHO05D005873 3.9e-27 125.2 84 71.4
Gorai.013G087100 Gossypium raimondii HOM05D004884 ORTHO05D005873 2.8e-25 119.0 89 66.3
BcaC07g41508 Brassica carinata HOM05D004884 ORTHO05D005873 1.4e-24 116.7 101 57.4
Oeu024660.1 Olea europaea HOM05D004884 ORTHO05D005873 2.1e-20 102.8 63 76.2
Gohir.A06G098210 Gossypium hirsutum HOM05D004884 ORTHO05D005873 1.0e-19 100.5 63 71.4
Nitab4.5_0000620g0040 Nicotiana tabacum HOM05D004884 ORTHO05D005873 2.8e-17 92.4 65 70.8
Gohir.A13G076901 Gossypium hirsutum HOM05D004884 ORTHO05D005873 8.4e-14 80.9 82 50.0
Cre12.g561200 Chlamydomonas reinhardtii HOM05D004884 ORTHO05D005873 1.4e-13 80.1 106 36.8
Gohir.D01G156500 Gossypium hirsutum HOM05D004884 ORTHO05D005873 9.2e-13 77.4 48 72.9
MCO11G456 Micromonas commoda HOM05D004884 ORTHO05D005873 2.3e-11 72.8 121 35.5
DCAR_015322 Daucus carota HOM05D004884 ORTHO05D005873 1.1e-10 70.5 40 80.0
Hund04518 Selenicereus undatus HOM05D004884 ORTHO05D005873 1.8e-08 63.2 40 75.0
Nn8g39461 Nelumbo nucifera HOM05D004884 ORTHO05D005873 2.6e-07 59.3 45 62.2
PRCOL_00001860 Prasinoderma coloniale HOM05D004884 ORTHO05D005873 2.6e-07 59.3 102 31.4


User provided reference genes

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