Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0006171g0010 Nicotiana tabacum HOM05D008094 ORTHO05D010082 8.5e-100 367.1 196 100.0
Nitab4.5_0000787g0100 Nicotiana tabacum HOM05D008094 ORTHO05D010082 2.7e-85 318.9 197 87.8
PGSC0003DMG400024912 Solanum tuberosum HOM05D008094 ORTHO05D010082 3.7e-63 245.4 204 71.6
Sopen01g045830 Solanum pennellii HOM05D008094 ORTHO05D010082 6.4e-63 244.6 202 71.8
Solyc01g103470.2 Solanum lycopersicum HOM05D008094 ORTHO05D010082 1.5e-59 233.4 199 70.4
Peaxi162Scf00011g01411 Petunia axillaris HOM05D008094 ORTHO05D010082 1.3e-52 210.3 208 68.3
Hma1.2p1_0633F.1_g192710 Hydrangea macrophylla HOM05D008094 ORTHO05D010082 1.0e-23 114.4 210 44.3
DCAR_001747 Daucus carota HOM05D008094 ORTHO05D010082 7.1e-22 108.2 197 43.7
TAR628G1718 Trochodendron aralioides HOM05D008094 ORTHO05D010082 1.6e-21 107.1 199 44.2
Rhsim05G0113700 Rhododendron simsii HOM05D008094 ORTHO05D010082 1.0e-20 104.4 208 41.3
DCAR_029178 Daucus carota HOM05D008094 ORTHO05D010082 1.3e-20 104.0 199 43.7
Cfa004482 Carpinus fangiana HOM05D008094 ORTHO05D010082 2.2e-18 96.7 204 40.2
Dinv29599 Davidia involucrata HOM05D008094 ORTHO05D010082 2.4e-17 93.2 169 46.7
Potri.004G224600 Populus trichocarpa HOM05D008094 ORTHO05D010082 9.0e-17 91.3 199 37.7
Potri.003G006100 Populus trichocarpa HOM05D008094 ORTHO05D010082 1.2e-16 90.9 201 38.3
Duzib132G1075 Durio zibethinus HOM05D008094 ORTHO05D010082 2.6e-16 89.7 196 37.8
Sabra03G0003200 Salix brachista HOM05D008094 ORTHO05D010082 1.7e-15 87.0 77 61.0
COL.COLO4_17715 Corchorus olitorius HOM05D008094 ORTHO05D010082 2.9e-15 86.3 204 36.3
Nn3g18571 Nelumbo nucifera HOM05D008094 ORTHO05D010082 5.5e-14 82.0 196 40.8
QL02p100749 Quercus lobata HOM05D008094 ORTHO05D010082 9.4e-14 81.3 209 38.3
Thecc.02G017400 Theobroma cacao HOM05D008094 ORTHO05D010082 9.4e-14 81.3 199 35.2
MELO3C016497.2 Cucumis melo HOM05D008094 ORTHO05D010082 1.2e-13 80.9 208 35.1
Nn1g09196 Nelumbo nucifera HOM05D008094 ORTHO05D010082 1.2e-13 80.9 200 37.0
Psat1g222640 Pisum sativum HOM05D008094 ORTHO05D010082 1.6e-13 80.5 198 38.9
Oeu010208.1 Olea europaea HOM05D008094 ORTHO05D010082 3.6e-13 79.3 73 57.5
CsaV3_3G006440 Cucumis sativus L. HOM05D008094 ORTHO05D010082 6.1e-13 78.6 217 33.6
Lsat_1_v5_gn_5_104661 Lactuca sativa HOM05D008094 ORTHO05D010082 1.4e-12 77.4 207 38.6
Eucgr.I02770 Eucalyptus grandis HOM05D008094 ORTHO05D010082 3.0e-12 76.3 197 38.1
Actinidia01611 Actinidia chinensis HOM05D008094 ORTHO05D010082 3.9e-12 75.9 91 50.5
Aqoxy5G01193 Aquilegia oxysepala HOM05D008094 ORTHO05D010082 5.1e-12 75.5 197 39.1
TPR.G2107 Trifolium pratense HOM05D008094 ORTHO05D010082 6.7e-12 75.1 198 33.3
Sed0001188 Sechium edule HOM05D008094 ORTHO05D010082 8.8e-12 74.7 88 51.1
Manes.10G117000 Manihot esculenta HOM05D008094 ORTHO05D010082 3.3e-11 72.8 199 34.2
Prupe.1G579700 Prunus persica HOM05D008094 ORTHO05D010082 4.3e-11 72.4 201 33.8
Gohir.A01G184400 Gossypium hirsutum HOM05D008094 ORTHO05D010082 2.2e-10 70.1 200 37.0
Lalb_Chr15g0090761 Lupinus albus HOM05D008094 ORTHO05D010082 3.7e-10 69.3 210 34.8
Gohir.A03G215550 Gossypium hirsutum HOM05D008094 ORTHO05D010082 4.8e-10 68.9 144 36.8
Gohir.D01G175400 Gossypium hirsutum HOM05D008094 ORTHO05D010082 4.8e-10 68.9 200 34.5
ClCG10G007120 Citrullus lanatus HOM05D008094 ORTHO05D010082 1.4e-09 67.4 203 32.5
Gorai.002G217700 Gossypium raimondii HOM05D008094 ORTHO05D010082 1.8e-09 67.0 200 34.5
CiPaw.06G174300 Carya illinoinensis HOM05D008094 ORTHO05D010082 5.3e-09 65.5 211 36.0
CiPaw.07G234200 Carya illinoinensis HOM05D008094 ORTHO05D010082 5.3e-09 65.5 204 34.8
MBI03_g07689_MAGBIO Magnolia biondii HOM05D008094 ORTHO05D010082 6.9e-09 65.1 154 35.7
Manes.07G025000 Manihot esculenta HOM05D008094 ORTHO05D010082 9.1e-09 64.7 182 31.3
Ciclev10002589m.g Citrus clementina HOM05D008094 ORTHO05D010082 1.2e-08 64.3 217 33.6
Nn3g19209 Nelumbo nucifera HOM05D008094 ORTHO05D010082 2.0e-08 63.5 166 36.1
Medtr2g005710 Medicago truncatula HOM05D008094 ORTHO05D010082 2.6e-08 63.2 201 32.3
Lsat_1_v5_gn_7_76841 Lactuca sativa HOM05D008094 ORTHO05D010082 4.5e-08 62.4 84 46.4
arahy.Tifrunner.gnm1.ann1.8474VB Arachis hypogaea HOM05D008094 ORTHO05D010082 7.7e-08 61.6 84 50.0
arahy.Tifrunner.gnm1.ann1.V5JGY8 Arachis hypogaea HOM05D008094 ORTHO05D010082 7.7e-08 61.6 84 50.0
ATR1136G131 Amborella trichopoda HOM05D008094 ORTHO05D010082 1.7e-07 60.5 100 46.0
arahy.Tifrunner.gnm1.ann1.4TXG74 Arachis hypogaea HOM05D008094 ORTHO05D010082 2.2e-07 60.1 82 50.0
Lj6g0003255 Lotus japonicus HOM05D008094 ORTHO05D010082 2.9e-07 59.7 156 37.2
SGA_v2.0_scaffold83G26277 Striga asiatica HOM05D008094 ORTHO05D010082 6.5e-07 58.5 80 45.0
Cpa.g.sc113.38 Carica papaya HOM05D008094 ORTHO05D010082 8.5e-07 58.2 209 31.6
FAN18G0201 Fragaria x ananassa HOM05D031323 ORTHO05D010082 4.2e-06 55.8 197 34.5
Glyma.12G166400 Glycine max HOM05D008094 ORTHO05D010082 4.2e-06 55.8 64 50.0
Potri.019G078000 Populus trichocarpa HOM05D008094 ORTHO05D010082 4.2e-06 55.8 196 29.6
Aa31LG4G9400 Aethionema arabicum HOM05D010278 ORTHO05D012429 5.5e-06 55.5 59 52.5
PSO782G4978 Papaver somniferum HOM05D008094 ORTHO05D010082 7.2e-06 55.1 232 30.2
Atru.chr6.518 Acer truncatum HOM05D008094 ORTHO05D010082 9.4e-06 54.7 62 50.0
ECA234G3545 Erigeron canadensis HOM05D008094 ORTHO05D010082 9.4e-06 54.7 211 35.5


User provided reference genes

Program Settings