Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0006167g0030 Nicotiana tabacum HOM05D002954 ORTHO05D003353 9.8e-49 196.4 96 100.0
Nitab4.5_0000229g0050 Nicotiana tabacum HOM05D002954 ORTHO05D003353 1.2e-38 162.9 101 82.2
Nitab4.5_0002373g0020 Nicotiana tabacum HOM05D002954 ORTHO05D003353 6.6e-37 157.1 100 79.0
Nitab4.5_0000002g0110 Nicotiana tabacum HOM05D002954 ORTHO05D003353 2.8e-35 151.8 101 78.2
Nitab4.5_0007595g0020 Nicotiana tabacum HOM05D002954 ORTHO05D003353 2.0e-33 145.6 130 62.3
Nitab4.5_0003353g0020 Nicotiana tabacum HOM05D002954 ORTHO05D003353 2.5e-28 128.6 83 77.1
Nitab4.5_0002430g0040 Nicotiana tabacum HOM05D002954 ORTHO05D003353 9.5e-28 126.7 101 65.3
Nitab4.5_0000416g0230 Nicotiana tabacum HOM05D002954 ORTHO05D003353 3.6e-27 124.8 101 64.4
Nitab4.5_0003410g0070 Nicotiana tabacum HOM05D002954 ORTHO05D003353 1.4e-26 122.9 101 64.4
Nitab4.5_0003879g0040 Nicotiana tabacum HOM05D002954 ORTHO05D003353 4.0e-26 121.3 99 64.6
Peaxi162Scf00485g01219 Petunia axillaris HOM05D002954 ORTHO05D003353 4.9e-24 114.4 106 59.4
Nitab4.5_0000817g0040 Nicotiana tabacum HOM05D002954 ORTHO05D003353 1.9e-23 112.5 76 72.4
Nitab4.5_0000140g0170 Nicotiana tabacum HOM05D002954 ORTHO05D003353 2.4e-23 112.1 79 72.2
Nitab4.5_0001076g0100 Nicotiana tabacum HOM05D002954 ORTHO05D003353 9.2e-23 110.2 78 70.5
Nitab4.5_0003105g0010 Nicotiana tabacum HOM05D002954 ORTHO05D003353 1.6e-22 109.4 73 74.0
Sopen01g012120 Solanum pennellii HOM05D000002 ORTHO05D000001 4.6e-22 107.8 92 60.9
Nitab4.5_0007501g0010 Nicotiana tabacum HOM05D002954 ORTHO05D003353 3.9e-21 104.8 83 63.9
Lj1g0003177 Lotus japonicus HOM05D002954 ORTHO05D003353 1.8e-18 95.9 97 54.6
Peaxi162Scf00002g05111 Petunia axillaris HOM05D002954 ORTHO05D003353 1.2e-17 93.2 75 62.7
Psat5g237440 Pisum sativum HOM05D002954 ORTHO05D003353 4.9e-16 87.8 96 49.0
Nitab4.5_0003952g0070 Nicotiana tabacum HOM05D002954 ORTHO05D003353 6.4e-16 87.4 61 70.5
Nitab4.5_0000255g0300 Nicotiana tabacum HOM05D002954 ORTHO05D003353 2.4e-15 85.5 77 54.5
Psat0s2772g0080 Pisum sativum HOM05D002954 ORTHO05D003353 1.2e-14 83.2 94 50.0
Phvul.003G087300 Phaseolus vulgaris HOM05D002954 ORTHO05D003353 1.6e-14 82.8 92 47.8
Nitab4.5_0011441g0010 Nicotiana tabacum HOM05D002954 ORTHO05D003353 7.8e-14 80.5 42 90.5
Nitab4.5_0006326g0030 Nicotiana tabacum HOM05D002954 ORTHO05D003353 5.1e-13 77.8 90 54.4
TPR.G16180 Trifolium pratense HOM05D002954 ORTHO05D003353 8.6e-13 77.0 94 46.8
arahy.Tifrunner.gnm1.ann1.R7YZCH Arachis hypogaea HOM05D002954 ORTHO05D003353 1.5e-12 76.3 99 44.4
Nitab4.5_0002473g0090 Nicotiana tabacum HOM05D002954 ORTHO05D003353 1.5e-12 76.3 62 61.3
Phvul.008G149000 Phaseolus vulgaris HOM05D002954 ORTHO05D003353 1.5e-12 76.3 98 42.9
Lj5g0000508 Lotus japonicus HOM05D002954 ORTHO05D003353 2.5e-12 75.5 82 43.9
Psat3g100040 Pisum sativum HOM05D002954 ORTHO05D003353 2.5e-12 75.5 96 46.9
Lj4g0009760 Lotus japonicus HOM05D002954 ORTHO05D003353 3.3e-12 75.1 94 40.4
VMungo0464G1442 Vigna mungo HOM05D005949 ORTHO05D006945 3.3e-12 75.1 96 42.7
arahy.Tifrunner.gnm1.ann1.ZY1J0Y Arachis hypogaea HOM05D002954 ORTHO05D003353 4.3e-12 74.7 99 43.4
Lj1g0008605 Lotus japonicus HOM05D002954 ORTHO05D003353 4.3e-12 74.7 91 47.3
arahy.Tifrunner.gnm1.ann1.0Q01G3 Arachis hypogaea HOM05D002954 ORTHO05D003353 5.6e-12 74.3 99 43.4
arahy.Tifrunner.gnm1.ann1.NE3TTV Arachis hypogaea HOM05D002954 ORTHO05D003353 5.6e-12 74.3 99 43.4
arahy.Tifrunner.gnm1.ann1.9YTX13 Arachis hypogaea HOM05D002954 ORTHO05D003353 9.6e-12 73.6 98 43.9
Peaxi162Scf00016g01219 Petunia axillaris HOM05D002954 ORTHO05D003353 2.1e-11 72.4 77 50.6
Peaxi162Scf00173g00019 Petunia axillaris HOM05D002954 ORTHO05D003353 2.1e-11 72.4 77 50.6
Solyc11g044937.1 Solanum lycopersicum HOM05D002954 ORTHO05D003353 8.1e-11 70.5 94 44.7
arahy.Tifrunner.gnm1.ann1.B3S8NN Arachis hypogaea HOM05D002954 ORTHO05D003353 1.1e-10 70.1 93 44.1
Lj6g0018229 Lotus japonicus HOM05D002954 ORTHO05D003353 1.1e-10 70.1 83 47.0
Psat5g178080 Pisum sativum HOM05D002954 ORTHO05D003353 1.1e-10 70.1 80 43.8
Solyc10g150115.1 Solanum lycopersicum HOM05D002954 ORTHO05D003353 1.4e-10 69.7 92 44.6
arahy.Tifrunner.gnm1.ann1.LE5ID3 Arachis hypogaea HOM05D009662 ORTHO05D003353 2.4e-10 68.9 97 41.2
Nitab4.5_0000051g0340 Nicotiana tabacum HOM05D002954 ORTHO05D003353 2.4e-10 68.9 86 43.0
TPR.G32610 Trifolium pratense HOM05D002954 ORTHO05D003353 2.4e-10 68.9 72 50.0
Peaxi162Scf00093g00015 Petunia axillaris HOM05D002954 ORTHO05D010308 3.1e-10 68.6 77 49.4
Peaxi162Scf00624g00076 Petunia axillaris HOM05D002954 ORTHO05D003353 3.1e-10 68.6 93 41.9
arahy.Tifrunner.gnm1.ann1.QKP2RW Arachis hypogaea HOM05D002954 ORTHO05D003353 6.8e-10 67.4 77 46.8
Phvul.010G077600 Phaseolus vulgaris HOM05D002954 ORTHO05D003353 6.8e-10 67.4 92 42.4
arahy.Tifrunner.gnm1.ann1.C5M9FF Arachis hypogaea HOM05D002954 ORTHO05D000385 8.9e-10 67.0 92 39.1
Nitab4.5_0000386g0150 Nicotiana tabacum HOM05D002954 ORTHO05D003353 8.9e-10 67.0 100 40.0
Sopen09g020910 Solanum pennellii HOM05D002954 ORTHO05D003353 8.9e-10 67.0 98 40.8
VMungo0647G1703 Vigna mungo HOM05D002954 ORTHO05D000002 8.9e-10 67.0 97 45.4
Peaxi162Scf00318g00919 Petunia axillaris HOM05D002954 ORTHO05D003353 2.0e-09 65.9 93 40.9
arahy.Tifrunner.gnm1.ann1.5TT13I Arachis hypogaea HOM05D002954 ORTHO05D003353 4.4e-09 64.7 95 41.1
arahy.Tifrunner.gnm1.ann1.N8CY10 Arachis hypogaea HOM05D009662 ORTHO05D003353 5.8e-09 64.3 97 39.2
Peaxi162Scf00417g00048 Petunia axillaris HOM05D002954 ORTHO05D003353 5.8e-09 64.3 85 41.2
Glyma.20G055700 Glycine max HOM05D002954 ORTHO05D003353 7.6e-09 63.9 96 39.6
Lalb_Chr22g0361071 Lupinus albus HOM05D002954 ORTHO05D003353 9.9e-09 63.5 98 36.7
PGSC0003DMG400011107 Solanum tuberosum HOM05D002954 ORTHO05D003353 1.7e-08 62.8 43 62.8
Nitab4.5_0000068g0470 Nicotiana tabacum HOM05D002954 ORTHO05D003353 2.2e-08 62.4 30 96.7
Phvul.L001985 Phaseolus vulgaris HOM05D002954 ORTHO05D003353 2.2e-08 62.4 72 45.8
Solyc01g010405.1 Solanum lycopersicum HOM05D002954 ORTHO05D003353 2.9e-08 62.0 99 42.4
Phvul.011G159900 Phaseolus vulgaris HOM05D002954 ORTHO05D003353 4.9e-08 61.2 59 49.2
CAN.G125.23 Capsicum annuum HOM05D000107 ORTHO05D000062 6.4e-08 60.8 81 39.5
Nitab4.5_0000008g0430 Nicotiana tabacum HOM05D002954 ORTHO05D015034 6.4e-08 60.8 86 43.0
Peaxi162Scf00039g00318 Petunia axillaris HOM05D002954 ORTHO05D003353 6.4e-08 60.8 90 40.0
arahy.Tifrunner.gnm1.ann1.DXNF3X Arachis hypogaea HOM05D002954 ORTHO05D003353 1.9e-07 59.3 77 42.9
arahy.Tifrunner.gnm1.ann1.R8QYAJ Arachis hypogaea HOM05D009662 ORTHO05D003353 1.9e-07 59.3 77 37.7
Nitab4.5_0002227g0040 Nicotiana tabacum HOM05D002954 ORTHO05D003353 1.9e-07 59.3 30 90.0
Phvul.003G046001 Phaseolus vulgaris HOM05D002954 ORTHO05D003353 2.4e-07 58.9 53 52.8
Psat0s1021g0160 Pisum sativum HOM05D002954 ORTHO05D003353 4.2e-07 58.2 52 55.8
Psat0s1021g0200 Pisum sativum HOM05D002954 ORTHO05D003353 4.2e-07 58.2 52 55.8
Psat0s10455g0040 Pisum sativum HOM05D002954 ORTHO05D003353 4.2e-07 58.2 52 55.8
Psat0s9469g0040 Pisum sativum HOM05D002954 ORTHO05D003353 4.2e-07 58.2 52 55.8
Psat0s3286g0120 Pisum sativum HOM05D002954 ORTHO05D003353 5.4e-07 57.8 51 56.9
VMungo1309G2137 Vigna mungo HOM05D000006 ORTHO05D000001 7.1e-07 57.4 74 43.2
arahy.Tifrunner.gnm1.ann1.H1PTY0 Arachis hypogaea HOM05D002954 ORTHO05D010308 9.3e-07 57.0 87 40.2
Phvul.010G047600 Phaseolus vulgaris HOM05D002954 ORTHO05D003353 9.3e-07 57.0 53 52.8
arahy.Tifrunner.gnm1.ann1.FG1AAR Arachis hypogaea HOM05D009662 ORTHO05D003353 1.2e-06 56.6 91 37.4
arahy.Tifrunner.gnm1.ann1.T3L04J Arachis hypogaea HOM05D009662 ORTHO05D003353 1.2e-06 56.6 85 40.0
Nitab4.5_0004792g0010 Nicotiana tabacum HOM05D002954 ORTHO05D003353 1.2e-06 56.6 33 84.8
Psat0s1021g0240 Pisum sativum HOM05D002954 ORTHO05D003353 1.2e-06 56.6 52 53.8
Nitab4.5_0007579g0030 Nicotiana tabacum HOM05D002954 ORTHO05D003353 1.6e-06 56.2 30 86.7
Peaxi162Scf00299g00004 Petunia axillaris HOM05D009128 ORTHO05D011389 2.7e-06 55.5 87 36.8
TPR.G34719 Trifolium pratense HOM05D002954 ORTHO05D000385 2.7e-06 55.5 78 37.2
Peaxi162Scf00006g00207 Petunia axillaris HOM05D002954 ORTHO05D003353 4.6e-06 54.7 63 47.6
Ca_03866_v3 Cicer arietinum L. HOM05D009226 ORTHO05D010767 7.8e-06 53.9 78 38.5
Nitab4.5_0000499g0080 Nicotiana tabacum HOM05D000155 ORTHO05D000022 7.8e-06 53.9 32 78.1
Phvul.011G150700 Phaseolus vulgaris HOM05D002954 ORTHO05D003353 7.8e-06 53.9 52 51.9


User provided reference genes

Program Settings