Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0006159g0060 Nicotiana tabacum HOM05D005857 ORTHO05D007193 6.0e-35 150.2 72 100.0
Solyc01g102830.3 Solanum lycopersicum HOM05D005857 ORTHO05D007193 5.1e-34 147.1 72 97.2
Sopen01g045230 Solanum pennellii HOM05D005857 ORTHO05D007193 5.1e-34 147.1 72 97.2
PGSC0003DMG400018258 Solanum tuberosum HOM05D005857 ORTHO05D007193 1.5e-33 145.6 72 95.8
Nitab4.5_0000521g0060 Nicotiana tabacum HOM05D005857 ORTHO05D007193 9.6e-33 142.9 72 94.4
CAN.G1379.7 Capsicum annuum HOM05D005857 ORTHO05D007193 4.0e-31 137.5 72 93.1
Peaxi162Scf00194g01021 Petunia axillaris HOM05D005857 ORTHO05D007193 1.1e-25 119.4 58 91.4
Sc03g0005520 Simmondsia chinensis HOM05D005857 ORTHO05D007193 4.3e-25 117.5 64 85.9
Manes.14G164233 Manihot esculenta HOM05D005857 ORTHO05D007193 5.7e-25 117.1 72 76.4
Potri.004G229900 Populus trichocarpa HOM05D005857 ORTHO05D007193 1.1e-23 112.8 72 77.8
Lsat_1_v5_gn_9_83180 Lactuca sativa HOM05D005857 ORTHO05D007193 1.4e-23 112.5 73 76.7
CSS0043387 Camellia sinensis var. sinensis HOM05D005857 ORTHO05D007193 1.8e-23 112.1 61 85.2
SalBow1G1563 Salvia bowleyana HOM05D005857 ORTHO05D007193 1.8e-23 112.1 69 79.7
DCAR_001733 Daucus carota HOM05D005857 ORTHO05D007193 2.4e-23 111.7 72 73.6
Manes.06G013700 Manihot esculenta HOM05D005857 ORTHO05D007193 2.4e-23 111.7 72 72.2
CSS0006636 Camellia sinensis var. sinensis HOM05D005857 ORTHO05D007193 5.3e-23 110.5 61 83.6
vmacro01623 Vaccinium macrocarpon HOM05D005857 ORTHO05D007193 6.9e-23 110.2 61 82.0
COL.COLO4_31107 Corchorus olitorius HOM05D005857 ORTHO05D007193 2.0e-22 108.6 72 73.6
Nitab4.5_0001085g0140 Nicotiana tabacum HOM05D005857 ORTHO05D007193 2.0e-22 108.6 52 92.3
HanXRQChr11g0343801 Helianthus annuus HOM05D005857 ORTHO05D007193 2.6e-22 108.2 62 80.6
SGA_v2.0_scaffold100G29556 Striga asiatica HOM05D001195 ORTHO05D001138 3.4e-22 107.8 71 76.1
CANSAT01G1822 Cannabis sativa HOM05D005857 ORTHO05D007193 5.8e-22 107.1 73 69.9
ATR1089G102 Amborella trichopoda HOM05D005857 ORTHO05D007193 1.0e-21 106.3 57 82.5
Oeu010607.1 Olea europaea HOM05D005857 ORTHO05D007193 1.0e-21 106.3 73 74.0
PSO210G5758 Papaver somniferum HOM05D005857 ORTHO05D007193 1.0e-21 106.3 72 73.6
TWI23G0165 Tripterygium wilfordii HOM05D005857 ORTHO05D007193 1.0e-21 106.3 73 75.3
TWI59G0768 Tripterygium wilfordii HOM05D005857 ORTHO05D007193 1.0e-21 106.3 73 75.3
Nitab4.5_0008987g0050 Nicotiana tabacum HOM05D005857 ORTHO05D007193 1.7e-21 105.5 56 83.9
PSO447G0367 Papaver somniferum HOM05D005857 ORTHO05D007193 1.7e-21 105.5 72 72.2
Cc08_g11670 Coffea canephora HOM05D005857 ORTHO05D007193 2.9e-21 104.8 76 71.1
FvH4_5g27520 Fragaria vesca HOM05D005857 ORTHO05D007193 3.8e-21 104.4 67 71.6
Oeu000158.1 Olea europaea HOM05D005857 ORTHO05D007193 3.8e-21 104.4 62 80.6
BcaB03g13096 Brassica carinata HOM05D005857 ORTHO05D007193 5.0e-21 104.0 63 76.2
TAR628G1233 Trochodendron aralioides HOM05D005857 ORTHO05D007193 6.5e-21 103.6 72 70.8
QL02p103650 Quercus lobata HOM05D005857 ORTHO05D007193 8.4e-21 103.2 71 70.4
BcaB07g30330 Brassica carinata HOM05D005857 ORTHO05D007193 1.1e-20 102.8 63 74.6
A06p10470 Brassica napus HOM05D005857 ORTHO05D007193 1.9e-20 102.1 63 74.6
C05p12250 Brassica napus HOM05D005857 ORTHO05D007193 1.9e-20 102.1 63 74.6
BraA06t24227Z Brassica rapa HOM05D005857 ORTHO05D007193 1.9e-20 102.1 63 74.6
CsaV3_5G027560 Cucumis sativus L. HOM05D005857 ORTHO05D007193 1.9e-20 102.1 72 70.8
Thecc.06G020800 Theobroma cacao HOM05D005857 ORTHO05D007193 1.9e-20 102.1 72 73.6
AL1G26340 Arabidopsis lyrata HOM05D005857 ORTHO05D007193 2.5e-20 101.7 73 68.5
AT1G14450 Arabidopsis thaliana HOM05D005857 ORTHO05D007193 2.5e-20 101.7 73 68.5
Thhalv10005238m.g Eutrema salsugineum HOM05D005857 ORTHO05D007193 2.5e-20 101.7 72 66.7
Gohir.A05G160000 Gossypium hirsutum HOM05D005857 ORTHO05D007193 2.5e-20 101.7 74 68.9
Gohir.D05G162700 Gossypium hirsutum HOM05D005857 ORTHO05D007193 2.5e-20 101.7 74 68.9
Gorai.009G167700 Gossypium raimondii HOM05D005857 ORTHO05D007193 2.5e-20 101.7 74 68.9
RcHm_v2.0_Chr7g0218891 Rosa chinensis HOM05D005857 ORTHO05D007193 2.5e-20 101.7 67 70.1
BcaC03g17146 Brassica carinata HOM05D005857 ORTHO05D007193 3.2e-20 101.3 72 68.1
BcaC05g25348 Brassica carinata HOM05D005857 ORTHO05D007193 3.2e-20 101.3 70 68.6
Cpa.g.sc34.126 Carica papaya HOM05D005857 ORTHO05D007193 3.2e-20 101.3 69 68.1
C02p50660 Brassica napus HOM05D005857 ORTHO05D007193 4.2e-20 100.9 63 73.0
BolC2t11149H Brassica oleracea HOM05D005857 ORTHO05D007193 4.2e-20 100.9 63 73.0
BraA02t08316Z Brassica rapa HOM05D005857 ORTHO05D007193 4.2e-20 100.9 63 73.0
Carub.0005s0154 Capsella rubella HOM05D005857 ORTHO05D007193 4.2e-20 100.9 63 73.0
CARHR145070 Cardamine hirsuta HOM05D005857 ORTHO05D007193 4.2e-20 100.9 63 73.0
AT2G02510 Arabidopsis thaliana HOM05D005857 ORTHO05D007193 7.1e-20 100.1 63 71.4
BolC5t29979H Brassica oleracea HOM05D005857 ORTHO05D007193 7.1e-20 100.1 73 67.1
Duzib133G0295 Durio zibethinus HOM05D005857 ORTHO05D007193 7.1e-20 100.1 75 68.0
HanXRQChr10g0285581 Helianthus annuus HOM05D005857 ORTHO05D007193 9.3e-20 99.8 62 75.8
Prupe.1G586500 Prunus persica HOM05D005857 ORTHO05D007193 9.3e-20 99.8 61 73.8
PGR042G3007 Punica granatum HOM05D005857 ORTHO05D007193 9.3e-20 99.8 74 67.6
Sp1g12820 Schrenkiella parvula HOM05D005857 ORTHO05D007193 9.3e-20 99.8 73 67.1
BcaB08g34397 Brassica carinata HOM05D005857 ORTHO05D007193 1.2e-19 99.4 73 65.8
Migut.B00707 Erythranthe guttata HOM05D005857 ORTHO05D007193 1.2e-19 99.4 67 73.1
Aqoxy5G01841 Aquilegia oxysepala HOM05D005857 ORTHO05D007193 1.6e-19 99.0 73 69.9
C08p16740 Brassica napus HOM05D005857 ORTHO05D007193 1.6e-19 99.0 63 73.0
Carub.0001s1416 Capsella rubella HOM05D005857 ORTHO05D007193 1.6e-19 99.0 73 65.8
Sp2g13760 Schrenkiella parvula HOM05D005857 ORTHO05D007193 1.6e-19 99.0 72 63.9
THA.LOC104801779 Tarenaya hassleriana HOM05D005857 ORTHO05D007193 1.6e-19 99.0 70 64.3
Thhalv10009257m.g Eutrema salsugineum HOM05D005857 ORTHO05D007193 2.1e-19 98.6 71 67.6
Aa31LG2G7600 Aethionema arabicum HOM05D005857 ORTHO05D007193 2.7e-19 98.2 62 71.0
CARHR014900 Cardamine hirsuta HOM05D005857 ORTHO05D007193 2.7e-19 98.2 71 67.6
MBI03_g21081_MAGBIO Magnolia biondii HOM05D005857 ORTHO05D007193 3.5e-19 97.8 53 83.0
Sed0006374 Sechium edule HOM05D005857 ORTHO05D007193 4.6e-19 97.4 61 70.5
AL5G11780 Arabidopsis lyrata HOM05D005857 ORTHO05D007193 6.1e-19 97.1 63 68.3
FAN18G0749 Fragaria x ananassa HOM05D005857 ORTHO05D007193 6.1e-19 97.1 62 71.0
CiPaw.06G177300 Carya illinoinensis HOM05D005857 ORTHO05D007193 1.3e-18 95.9 73 65.8
MD08G1249300 Malus domestica HOM05D005857 ORTHO05D007193 1.3e-18 95.9 57 75.4
MD15G1444100 Malus domestica HOM05D005857 ORTHO05D007193 1.3e-18 95.9 57 75.4
Aa31LG1G600 Aethionema arabicum HOM05D005857 ORTHO05D007193 2.3e-18 95.1 72 63.9
Nitab4.5_0004030g0040 Nicotiana tabacum HOM05D005857 ORTHO05D007193 2.3e-18 95.1 53 79.2
Cfa004425 Carpinus fangiana HOM05D005857 ORTHO05D007193 3.0e-18 94.7 57 77.2
Haze_09965 Corylus avellana HOM05D005857 ORTHO05D007193 3.0e-18 94.7 57 77.2
FAN04G0073 Fragaria x ananassa HOM05D005857 ORTHO05D007193 3.0e-18 94.7 60 71.7
AUR62040136 Chenopodium quinoa HOM05D005857 ORTHO05D007193 5.1e-18 94.0 66 68.2
ECA236G3879 Erigeron canadensis HOM05D005857 ORTHO05D007193 5.1e-18 94.0 69 66.7
THA.LOC104805131 Tarenaya hassleriana HOM05D005857 ORTHO05D007193 8.7e-18 93.2 70 58.6
CiPaw.05G001000 Carya illinoinensis HOM05D005857 ORTHO05D007193 1.5e-17 92.4 74 67.6
AUR62032483 Chenopodium quinoa HOM05D005857 ORTHO05D007193 1.5e-17 92.4 66 68.2
Zm00001eb244200 Zea mays HOM05D005857 ORTHO05D007193 1.5e-17 92.4 58 72.4
Atru.chr6.134 Acer truncatum HOM05D005857 ORTHO05D007193 1.9e-17 92.0 70 64.3
Atru.chr6.187 Acer truncatum HOM05D005857 ORTHO05D007193 1.9e-17 92.0 70 64.3
Os02g0564200 Oryza sativa ssp. japonica HOM05D005857 ORTHO05D007193 1.9e-17 92.0 58 70.7
Glyma.17G002300 Glycine max HOM05D005857 ORTHO05D007193 4.3e-17 90.9 60 75.0
Lj4g0009904 Lotus japonicus HOM05D005857 ORTHO05D007193 4.3e-17 90.9 54 77.8
FAN08G0400 Fragaria x ananassa HOM05D005857 ORTHO05D007193 7.4e-17 90.1 47 85.1
Lsat_1_v5_gn_9_124880 Lactuca sativa HOM05D005857 ORTHO05D007193 7.4e-17 90.1 47 87.2
SHI07423 Sapria himalayana HOM05D005857 ORTHO05D007193 7.4e-17 90.1 54 79.6
Lalb_Chr12g0195891 Lupinus albus HOM05D005857 ORTHO05D007193 1.3e-16 89.4 66 69.7
FAN13G1483 Fragaria x ananassa HOM05D005857 ORTHO05D007193 2.8e-16 88.2 60 66.7
Phvul.003G091000 Phaseolus vulgaris HOM05D005857 ORTHO05D007193 8.2e-16 86.7 62 64.5
Psat0s2555g0160 Pisum sativum HOM05D005857 ORTHO05D007193 8.2e-16 86.7 62 67.7
TPR.G6546 Trifolium pratense HOM05D005857 ORTHO05D007193 1.1e-15 86.3 60 68.3
Ciclev10003046m.g Citrus clementina HOM05D005857 ORTHO05D007193 1.8e-15 85.5 74 62.2
Medtr4g134550 Medicago truncatula HOM05D005857 ORTHO05D007193 1.8e-15 85.5 54 70.4
MD11G1276400 Malus domestica HOM05D005857 ORTHO05D007193 2.4e-15 85.1 69 60.9
Actinidia11730 Actinidia chinensis HOM05D005857 ORTHO05D007193 3.1e-15 84.7 45 80.0
Ciclev10003044m.g Citrus clementina HOM05D005857 ORTHO05D007193 5.3e-15 84.0 74 60.8
Ca_13524_v3 Cicer arietinum L. HOM05D005857 ORTHO05D007193 6.9e-15 83.6 62 64.5
unitig_8.g2962 Utricularia gibba HOM05D005857 ORTHO05D007193 6.9e-15 83.6 47 74.5
BcaC07g41575 Brassica carinata HOM05D005857 ORTHO05D007193 9.0e-15 83.2 73 58.9
EL10Ac3g06399 Beta vulgaris HOM05D005857 ORTHO05D007193 5.9e-14 80.5 54 63.0
Psat4g149960 Pisum sativum HOM05D005857 ORTHO05D007193 8.5e-13 76.6 58 63.8
A02p32930 Brassica napus HOM05D005857 ORTHO05D007193 1.4e-12 75.9 62 61.3
BolC8t49293H Brassica oleracea HOM05D005857 ORTHO05D007193 9.4e-12 73.2 37 83.8
Zm00001eb182520 Zea mays HOM05D005857 ORTHO05D007193 1.6e-11 72.4 62 54.8
Zm00001eb353890 Zea mays HOM05D005857 ORTHO05D007193 7.9e-11 70.1 45 66.7
Zm00001eb203220 Zea mays HOM05D005857 ORTHO05D007193 4.3e-09 64.3 46 58.7
GSVIVG01023132001 Vitis vinifera HOM05D005857 ORTHO05D007193 1.3e-08 62.8 30 86.7
Zm00001eb203730 Zea mays HOM05D005857 ORTHO05D007193 1.7e-08 62.4 45 57.8
Pp3c9_5250 Physcomitrium patens HOM05D005857 ORTHO05D007193 1.8e-07 58.9 54 48.1
Nitab4.5_0003439g0030 Nicotiana tabacum HOM05D005857 ORTHO05D007193 5.3e-07 57.4 45 62.2
Mapoly0052s0008 Marchantia polymorpha HOM05D005857 ORTHO05D007193 7.7e-06 53.5 52 50.0


User provided reference genes

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